RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 ZNF839A8K0R7 811 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 ULK1O75385 1050 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 CYP7B1O75881 506 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 FBXO21O94952 628 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 SCGB1D2O95969 90 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 IL18BPO95998 194 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 IL2P60568 153 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 OCRLQ01968 901 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 DBPQ10586 325 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 MOGSQ13724 837 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 LRRC41Q15345 812 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 TERF2Q15554 542 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 ATP13A4Q4VNC1 1196 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 NOL8Q76FK4 1167 aaKnown RBP6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 STPG3Q8N7X2 389 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 NUDT10Q8NFP7 164 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 SLC5A5Q92911 643 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 MBD6Q96DN6 1003 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 MTMR8Q96EF0 704 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 NUDT11Q96G61 164 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 GPR101Q96P66 508 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 ORAI2Q96SN7 254 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 RHOBTB2Q9BYZ6 727 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 ZMAT4Q9H898 229 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 FTSJ1Q9UET6 329 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 ATP23Q9Y6H3 246 aa6.35□□□□□ -1.39
HMGB1P1-201ENST00000522557 SLC12A8A0AV02 714 aa6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 E2F8A0AVK6 867 aa6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 C9orf118A6NHY6 69 aa6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 TRIM75PA6NK02 468 aa6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 B4GALT3O60512 393 aa6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 CLASP2O75122 1294 aaKnown RBP6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 TBX4P57082 545 aa6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 SESN3P58005 492 aa6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 ITKQ08881 620 aa6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 HSP90AB2PQ58FF8 381 aa6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 NXNQ6DKJ4 435 aa6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 ESRP1Q6NXG1 681 aaKnown RBP6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 EP400NLQ6ZTU2 488 aa6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 FAM124AQ86V42 546 aa6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 LGI4Q8N135 537 aa6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 C2orf69Q8N8R5 385 aa6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 IGDCC4Q8TDY8 1250 aa6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 WRNIP1Q96S55 665 aa6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 TACO1Q9BSH4 297 aaKnown RBP6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 KRTAP4-9Q9BYQ8 210 aa6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 ZKSCAN5Q9Y2L8 839 aa6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 ZDHHC9Q9Y397 364 aa6.34□□□□□ -1.39
HMGB1P1-201ENST00000522557 RFPL1O75677 317 aa6.33□□□□□ -1.4
HMGB1P1-201ENST00000522557 KLHL18O94889 574 aa6.33□□□□□ -1.4
HMGB1P1-201ENST00000522557 KNG1P01042 644 aa6.33□□□□□ -1.4
HMGB1P1-201ENST00000522557 SDHAP31040 664 aa6.33□□□□□ -1.4
HMGB1P1-201ENST00000522557 KPNA1P52294 538 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P1-201ENST00000522557 IRF9Q00978 393 aa6.33□□□□□ -1.4
HMGB1P1-201ENST00000522557 FAPQ12884 760 aa6.33□□□□□ -1.4
HMGB1P1-201ENST00000522557 LRRC32Q14392 662 aa6.33□□□□□ -1.4
HMGB1P1-201ENST00000522557 TBC1D10BQ4KMP7 808 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P1-201ENST00000522557 TMEM240Q5SV17 173 aa6.33□□□□□ -1.4
HMGB1P1-201ENST00000522557 ERICH6BQ5W0A0 696 aa6.33□□□□□ -1.4
HMGB1P1-201ENST00000522557 CPZQ66K79 652 aa6.33□□□□□ -1.4
HMGB1P1-201ENST00000522557 BORAQ6PGQ7 559 aa6.33□□□□□ -1.4
HMGB1P1-201ENST00000522557 HOOK2Q96ED9 719 aa6.33□□□□□ -1.4
HMGB1P1-201ENST00000522557 KCND1Q9NSA2 647 aa6.33□□□□□ -1.4
HMGB1P1-201ENST00000522557 GEMIN8Q9NWZ8 242 aaKnown RBP6.33□□□□□ -1.4
HMGB1P1-201ENST00000522557 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P1-201ENST00000522557 C4BPAP04003 597 aaKnown RBP6.32□□□□□ -1.4
HMGB1P1-201ENST00000522557 RBP3P10745 1247 aa6.32□□□□□ -1.4
HMGB1P1-201ENST00000522557 IARSP41252 1262 aaKnown RBP6.32□□□□□ -1.4
HMGB1P1-201ENST00000522557 NFATC3Q12968 1075 aa6.32□□□□□ -1.4
HMGB1P1-201ENST00000522557 KLF1Q13351 362 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P1-201ENST00000522557 ZNF610Q8N9Z0 462 aa6.32□□□□□ -1.4
HMGB1P1-201ENST00000522557 SCYL1Q96KG9 808 aa6.32□□□□□ -1.4
HMGB1P1-201ENST00000522557 C16orf92Q96LL3 132 aa6.32□□□□□ -1.4
HMGB1P1-201ENST00000522557 RBM15Q96T37 977 aaKnown RBP eCLIP6.32□□□□□ -1.4
HMGB1P1-201ENST00000522557 ELF4Q99607 663 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P1-201ENST00000522557 CCDC194A0A1B0GVG4 234 aa6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 B4GALT4O60513 344 aa6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 PLATP00750 562 aa6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 APPP05067 770 aa6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 ITGB3P05106 788 aa6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 PPP2R5AQ15172 486 aa6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 ABCB5Q2M3G0 1257 aa6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 BROXQ5VW32 411 aa6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 IQSEC1Q6DN90 963 aa6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 CC2D1AQ6P1N0 951 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 PRRT2Q7Z6L0 340 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 RASSF3Q86WH2 238 aa6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 KBTBD2Q8IY47 623 aa6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 TCEAL8Q8IYN2 117 aa6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 KLHL36Q8N4N3 616 aa6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 KIAA1958Q8N8K9 716 aa6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 C1orf162Q8NEQ5 155 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 LMBR1Q8WVP7 490 aa6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 MS4A5Q9H3V2 200 aa6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 ZIM2Q9NZV7 527 aa6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 ARHGAP28Q9P2N2 729 aa6.31□□□□□ -1.4
HMGB1P1-201ENST00000522557 ZNF536O15090 1300 aa6.3□□□□□ -1.4
HMGB1P1-201ENST00000522557 PRAMEF25A6NGN4 478 aa6.3□□□□□ -1.4
HMGB1P1-201ENST00000522557 RASSF10A6NK89 507 aa6.3□□□□□ -1.4
HMGB1P1-201ENST00000522557 SCDO00767 359 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms