RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 MMP14P50281 582 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 SLC16A1P53985 500 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 DRG2P55039 364 aaKnown RBP4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 DCAF7P61962 342 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 ERVK-24P63145 666 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 RNF4P78317 190 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 KRT83P78385 493 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 SPARCL1Q14515 664 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 LBRQ14739 615 aaKnown RBP4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 MEA1Q16626 185 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 UGT8Q16880 541 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 PAN2Q504Q3 1202 aaKnown RBP4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 ZNF449Q6P9G9 518 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 OTOP1Q7RTM1 612 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 TXLNBQ8N3L3 684 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 NPLOC4Q8TAT6 608 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 NANOS1Q8WY41 292 aaKnown RBP4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 RUBCNQ92622 972 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 ERCC4Q92889 916 aaPredicted RBP4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 MUL1Q969V5 352 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 SH3KBP1Q96B97 665 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 ABHD17AQ96GS6 310 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 KREMEN1Q96MU8 473 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 ASB2Q96Q27 587 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 MPHOSPH8Q99549 860 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 MRPL9Q9BYD2 267 aaKnown RBP4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 C22orf23Q9BZE7 217 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 UNKQ9C0B0 810 aaKnown RBP4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 PRDM14Q9GZV8 571 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 CXorf56Q9H5V9 222 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 CNTD2Q9H8S5 307 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 C14orf93Q9H972 538 aaKnown RBP4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 DBNDD1Q9H9R9 158 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 PNPLA8Q9NP80 782 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 RAD18Q9NS91 495 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 GJB4Q9NTQ9 266 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 GPATCH2Q9NW75 528 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 GFOD1Q9NXC2 390 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 NSMCE4AQ9NXX6 385 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 KIF17Q9P2E2 1029 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 GDF2Q9UK05 429 aaPredicted RBP4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 ODF2LQ9ULJ1 636 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 NAP1L2Q9ULW6 460 aaPredicted RBP4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 SIK3Q9Y2K2 1263 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 STXBP5LQ9Y2K9 1186 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 NR2E3Q9Y5X4 410 aa4.53□□□□□ -1.68
RNU4-60P-201ENST00000517239 A0A087X0M5 115 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 A0A1B0GX30 115 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 LGALS16A8MUM7 142 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 STXBP3O00186 592 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 FOXN3O00409 490 aaPredicted RBP4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 MEIS1O00470 390 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 HOXC11O43248 304 aaPredicted RBP4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 DOK2O60496 412 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 PLA2G6O60733 806 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 DKC1O60832 514 aaKnown RBP eCLIP4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 AOC2O75106 756 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 HMMRO75330 724 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 SOAT2O75908 522 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 IL18RAPO95256 599 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 PAPLNO95428 1278 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 CST3P01034 146 aaPredicted RBP4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 APOA4P06727 396 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 THBS1P07996 1170 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 MTHFD1P11586 935 aaKnown RBP4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 RPL17P18621 184 aaKnown RBP4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 PTX3P26022 381 aaPredicted RBP4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 ACTN2P35609 894 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 ATP6V1E1P36543 226 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 MAN2A2P49641 1150 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 KIF11P52732 1056 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 ZNF131P52739 623 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 LACTBP83111 547 aaPredicted RBP4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 IRF9Q00978 393 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 MAPK7Q13164 816 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 SLBPQ14493 270 aaKnown RBP eCLIP4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 PLCL1Q15111 1095 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 FSCN1Q16658 493 aaKnown RBP4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 FAM110CQ1W6H9 321 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 KIZQ2M2Z5 673 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 HECTD3Q5T447 861 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 ANKRD45Q5TZF3 282 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 ANGEL2Q5VTE6 544 aaKnown RBP4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 NUGGCQ68CJ6 796 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 FAM117BQ6P1L5 589 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 KCNK18Q7Z418 384 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 NBPF11Q86T75 865 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 MOGAT3Q86VF5 341 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 LRRTM4Q86VH4 590 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 VSIG1Q86XK7 387 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 CCDC103Q8IW40 242 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 CCDC191Q8NCU4 936 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 SIMC1Q8NDZ2 872 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 PANK1Q8TE04 598 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 PPP1R13LQ8WUF5 828 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 COPS5Q92905 334 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 TIGD1Q96MW7 591 aa4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 BAG1Q99933 345 aaPredicted RBP4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 TREX2Q9BQ50 279 aaPredicted RBP4.52□□□□□ -1.69
RNU4-60P-201ENST00000517239 MCMBPQ9BTE3 642 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms