RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ITGB3BPQ13352 177 aaPredicted RBP17.84■□□□□ 0.45
HDAC6-236ENST00000498808 SART3Q15020 963 aaKnown RBP17.84■□□□□ 0.45
HDAC6-236ENST00000498808 KIZQ2M2Z5 673 aa17.84■□□□□ 0.45
HDAC6-236ENST00000498808 ODR4Q5SWX8 454 aa17.84■□□□□ 0.45
HDAC6-236ENST00000498808 RARS2Q5T160 578 aaKnown RBP17.84■□□□□ 0.45
HDAC6-236ENST00000498808 KANK3Q6NY19 840 aa17.84■□□□□ 0.45
HDAC6-236ENST00000498808 RALYLQ86SE5 291 aaKnown RBP17.84■□□□□ 0.45
HDAC6-236ENST00000498808 CHD1LQ86WJ1 897 aa17.84■□□□□ 0.45
HDAC6-236ENST00000498808 ZNF654Q8IZM8 581 aa17.84■□□□□ 0.45
HDAC6-236ENST00000498808 LRRC43Q8N309 656 aa17.84■□□□□ 0.45
HDAC6-236ENST00000498808 SRBD1Q8N5C6 995 aaKnown RBP17.84■□□□□ 0.45
HDAC6-236ENST00000498808 C12orf76Q8N812 135 aaPredicted RBP17.84■□□□□ 0.45
HDAC6-236ENST00000498808 FLCNQ8NFG4 579 aa17.84■□□□□ 0.45
HDAC6-236ENST00000498808 CTCFLQ8NI51 663 aaPredicted RBP17.84■□□□□ 0.45
HDAC6-236ENST00000498808 FEZF2Q8TBJ5 459 aa17.84■□□□□ 0.45
HDAC6-236ENST00000498808 MAP3K14Q99558 947 aa17.84■□□□□ 0.45
HDAC6-236ENST00000498808 OSMRQ99650 979 aa17.84■□□□□ 0.45
HDAC6-236ENST00000498808 MXRA8Q9BRK3 442 aa17.84■□□□□ 0.45
HDAC6-236ENST00000498808 SPG21Q9NZD8 308 aa17.84■□□□□ 0.45
HDAC6-236ENST00000498808 DENND4AQ7Z401 1863 aa17.84■□□□□ 0.45
HDAC6-236ENST00000498808 DNAH14Q0VDD8 3507 aa17.83■□□□□ 0.45
HDAC6-236ENST00000498808 IGKV6D-21A0A0A0MT36 114 aa17.83■□□□□ 0.44
HDAC6-236ENST00000498808 ZBTB42B2RXF5 422 aa17.83■□□□□ 0.44
HDAC6-236ENST00000498808 E7EWF7 191 aa17.83■□□□□ 0.44
HDAC6-236ENST00000498808 NPR3P17342 541 aa17.83■□□□□ 0.44
HDAC6-236ENST00000498808 AOC1P19801 751 aa17.83■□□□□ 0.44
HDAC6-236ENST00000498808 KRT17Q04695 432 aa17.83■□□□□ 0.44
HDAC6-236ENST00000498808 SMC1AQ14683 1233 aaKnown RBP17.83■□□□□ 0.44
HDAC6-236ENST00000498808 KIAA1841Q6NSI8 718 aa17.83■□□□□ 0.44
HDAC6-236ENST00000498808 CCDC105Q8IYK2 499 aa17.83■□□□□ 0.44
HDAC6-236ENST00000498808 CMTR1Q8N1G2 835 aaKnown RBP17.83■□□□□ 0.44
HDAC6-236ENST00000498808 NCOA7Q8NI08 942 aa17.83■□□□□ 0.44
HDAC6-236ENST00000498808 SDF4Q9BRK5 362 aa17.83■□□□□ 0.44
HDAC6-236ENST00000498808 U3KPZ7 1027 aaPredicted RBP17.83■□□□□ 0.44
HDAC6-236ENST00000498808 ZNF292O60281 2723 aa17.82■□□□□ 0.44
HDAC6-236ENST00000498808 MED19A0JLT2 244 aaPredicted RBP17.82■□□□□ 0.44
HDAC6-236ENST00000498808 HBP1O60381 514 aa17.82■□□□□ 0.44
HDAC6-236ENST00000498808 DDAH1O94760 285 aa17.82■□□□□ 0.44
HDAC6-236ENST00000498808 KIF5BP33176 963 aa17.82■□□□□ 0.44
HDAC6-236ENST00000498808 SLC26A2P50443 739 aa17.82■□□□□ 0.44
HDAC6-236ENST00000498808 CRYBB1P53674 252 aaPredicted RBP17.82■□□□□ 0.44
HDAC6-236ENST00000498808 PTH1RQ03431 593 aa17.82■□□□□ 0.44
HDAC6-236ENST00000498808 ANGPT1Q15389 498 aa17.82■□□□□ 0.44
HDAC6-236ENST00000498808 SLC39A11Q8N1S5 342 aa17.82■□□□□ 0.44
HDAC6-236ENST00000498808 LY9Q9HBG7 655 aa17.82■□□□□ 0.44
HDAC6-236ENST00000498808 USTQ9Y2C2 406 aa17.82■□□□□ 0.44
HDAC6-236ENST00000498808 COL1A2P08123 1366 aa17.81■□□□□ 0.44
HDAC6-236ENST00000498808 hCG_1642624A0A1W2PR95 340 aa17.81■□□□□ 0.44
HDAC6-236ENST00000498808 HOXA2O43364 376 aa17.81■□□□□ 0.44
HDAC6-236ENST00000498808 GPR32O75388 356 aa17.81■□□□□ 0.44
HDAC6-236ENST00000498808 EOMESO95936 686 aa17.81■□□□□ 0.44
HDAC6-236ENST00000498808 CCNE2O96020 404 aa17.81■□□□□ 0.44
HDAC6-236ENST00000498808 CLLU1OSQ5K130 101 aa17.81■□□□□ 0.44
HDAC6-236ENST00000498808 CCDC60Q8IWA6 550 aaPredicted RBP17.81■□□□□ 0.44
HDAC6-236ENST00000498808 MB21D2Q8IYB1 491 aaPredicted RBP17.81■□□□□ 0.44
HDAC6-236ENST00000498808 PLCD3Q8N3E9 789 aa17.81■□□□□ 0.44
HDAC6-236ENST00000498808 RMDN1Q96DB5 314 aa17.81■□□□□ 0.44
HDAC6-236ENST00000498808 LZTS2Q9BRK4 669 aa17.81■□□□□ 0.44
HDAC6-236ENST00000498808 AGO4Q9HCK5 861 aaKnown RBP17.81■□□□□ 0.44
HDAC6-236ENST00000498808 DBR1Q9UK59 544 aaKnown RBP17.81■□□□□ 0.44
HDAC6-236ENST00000498808 C22orf31O95567 290 aa17.8■□□□□ 0.44
HDAC6-236ENST00000498808 VTNP04004 478 aa17.8■□□□□ 0.44
HDAC6-236ENST00000498808 NUCB1Q02818 461 aa17.8■□□□□ 0.44
HDAC6-236ENST00000498808 ATAT1Q5SQI0 421 aa17.8■□□□□ 0.44
HDAC6-236ENST00000498808 ABHD15Q6UXT9 468 aa17.8■□□□□ 0.44
HDAC6-236ENST00000498808 ABI1Q8IZP0 508 aa17.8■□□□□ 0.44
HDAC6-236ENST00000498808 CYP26B1Q9NR63 512 aa17.8■□□□□ 0.44
HDAC6-236ENST00000498808 DMXL1Q9Y485 3027 aa17.8■□□□□ 0.44
HDAC6-236ENST00000498808 CACNA1BQ00975 2339 aa17.8■□□□□ 0.44
HDAC6-236ENST00000498808 NT5C1B-RDH14C9J2C7 533 aa17.79■□□□□ 0.44
HDAC6-236ENST00000498808 DDX39AO00148 427 aaKnown RBP17.79■□□□□ 0.44
HDAC6-236ENST00000498808 BACH1O14867 736 aa17.79■□□□□ 0.44
HDAC6-236ENST00000498808 EPCAMP16422 314 aa17.79■□□□□ 0.44
HDAC6-236ENST00000498808 ATP4AP20648 1035 aa17.79■□□□□ 0.44
HDAC6-236ENST00000498808 CA8P35219 290 aa17.79■□□□□ 0.44
HDAC6-236ENST00000498808 ZNF484Q5JVG2 852 aa17.79■□□□□ 0.44
HDAC6-236ENST00000498808 ECHDC2Q86YB7 292 aa17.79■□□□□ 0.44
HDAC6-236ENST00000498808 DTWD2Q8NBA8 298 aa17.79■□□□□ 0.44
HDAC6-236ENST00000498808 AUTS2Q8WXX7 1259 aa17.79■□□□□ 0.44
HDAC6-236ENST00000498808 PGBD1Q96JS3 809 aa17.79■□□□□ 0.44
HDAC6-236ENST00000498808 DZANK1Q9NVP4 752 aa17.79■□□□□ 0.44
HDAC6-236ENST00000498808 CXCL14O95715 111 aa17.78■□□□□ 0.44
HDAC6-236ENST00000498808 RXRAP19793 462 aa17.78■□□□□ 0.44
HDAC6-236ENST00000498808 GNAQP50148 359 aa17.78■□□□□ 0.44
HDAC6-236ENST00000498808 METAP2P50579 478 aaKnown RBP eCLIP17.78■□□□□ 0.44
HDAC6-236ENST00000498808 CEP55Q53EZ4 464 aa17.78■□□□□ 0.44
HDAC6-236ENST00000498808 FAM160B1Q5W0V3 765 aa17.78■□□□□ 0.44
HDAC6-236ENST00000498808 PDXDC2PQ6P474 469 aa17.78■□□□□ 0.44
HDAC6-236ENST00000498808 RTP3Q9BQQ7 232 aa17.78■□□□□ 0.44
HDAC6-236ENST00000498808 ZBP1Q9H171 429 aa17.78■□□□□ 0.44
HDAC6-236ENST00000498808 NCOR2Q9Y618 2525 aa17.78■□□□□ 0.44
HDAC6-236ENST00000498808 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.77■□□□□ 0.44
HDAC6-236ENST00000498808 MEIS1O00470 390 aa17.77■□□□□ 0.44
HDAC6-236ENST00000498808 TDGQ13569 410 aa17.77■□□□□ 0.44
HDAC6-236ENST00000498808 TMC5Q6UXY8 1006 aa17.77■□□□□ 0.44
HDAC6-236ENST00000498808 TMEM173Q86WV6 379 aaPredicted RBP17.77■□□□□ 0.44
HDAC6-236ENST00000498808 VPS52Q8N1B4 723 aa17.77■□□□□ 0.44
HDAC6-236ENST00000498808 RNF169Q8NCN4 708 aa17.77■□□□□ 0.44
HDAC6-236ENST00000498808 SLC22A17Q8WUG5 538 aa17.77■□□□□ 0.44
HDAC6-236ENST00000498808 ZNF302Q9NR11 478 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms