RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 PPP2R3CQ969Q6 453 aa9.71□□□□□ -0.86
PRKCB-208ENST00000487674 FAM217BQ9NTX9 383 aaPredicted RBP9.71□□□□□ -0.86
PRKCB-208ENST00000487674 PLAGL2Q9UPG8 496 aa9.71□□□□□ -0.86
PRKCB-208ENST00000487674 MYH9P35579 1960 aaKnown RBP9.71□□□□□ -0.86
PRKCB-208ENST00000487674 NID2Q14112 1375 aa9.71□□□□□ -0.86
PRKCB-208ENST00000487674 MUC6Q6W4X9 2439 aa9.71□□□□□ -0.86
PRKCB-208ENST00000487674 FNDC1Q4ZHG4 1894 aaPredicted RBP9.7□□□□□ -0.86
PRKCB-208ENST00000487674 PLXNA4Q9HCM2 1894 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 IGLV3-22A0A075B6J6 115 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 CCDC196A0A1B0GTZ2 297 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 FAM86B1E9PN63 330 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 DDX39AO00148 427 aaKnown RBP9.7□□□□□ -0.86
PRKCB-208ENST00000487674 IPO5O00410 1097 aaKnown RBP9.7□□□□□ -0.86
PRKCB-208ENST00000487674 DCXO43602 365 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 TBX10O75333 385 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 ITGB1P05556 798 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 CYP3A4P08684 503 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 FAM86B2P0C5J1 330 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 KLRC1P26715 233 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 SARSP49591 514 aaKnown RBP9.7□□□□□ -0.86
PRKCB-208ENST00000487674 METAP2P50579 478 aaKnown RBP eCLIP9.7□□□□□ -0.868e-6■■□□□ 13.7
PRKCB-208ENST00000487674 FGD1P98174 961 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 SMAD4Q13485 552 aaKnown RBP9.7□□□□□ -0.86
PRKCB-208ENST00000487674 CAMK1Q14012 370 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 SMAD2Q15796 467 aaKnown RBP9.7□□□□□ -0.86
PRKCB-208ENST00000487674 PAN2Q504Q3 1202 aaKnown RBP9.7□□□□□ -0.86
PRKCB-208ENST00000487674 ODR4Q5SWX8 454 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 MIS18BP1Q6P0N0 1132 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 PDXDC2PQ6P474 469 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 THSD4Q6ZMP0 1018 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 REXO1Q8N1G1 1221 aaKnown RBP9.7□□□□□ -0.86
PRKCB-208ENST00000487674 CCDC12Q8WUD4 166 aaPredicted RBP9.7□□□□□ -0.86
PRKCB-208ENST00000487674 POP1Q99575 1024 aaKnown RBP9.7□□□□□ -0.86
PRKCB-208ENST00000487674 LARP6Q9BRS8 491 aaKnown RBP9.7□□□□□ -0.86
PRKCB-208ENST00000487674 TMX1Q9H3N1 280 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 ERVK-5Q9HDB9 667 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 ALG13Q9NP73 1137 aaKnown RBP9.7□□□□□ -0.86
PRKCB-208ENST00000487674 ZNF302Q9NR11 478 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 LRFN2Q9ULH4 789 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 NAP1L2Q9ULW6 460 aaPredicted RBP9.7□□□□□ -0.86
PRKCB-208ENST00000487674 EVPLQ92817 2033 aa9.7□□□□□ -0.86
PRKCB-208ENST00000487674 ZBTB42B2RXF5 422 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 DHX15O43143 795 aaKnown RBP9.69□□□□□ -0.86
PRKCB-208ENST00000487674 MBTPS2O43462 519 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 RPS6KA5O75582 802 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 CSPG5O95196 566 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 C22orf31O95567 290 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 DNAJB1P25685 340 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 GATMP50440 423 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 PLCB2Q00722 1185 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 DLX2Q07687 328 aaPredicted RBP9.69□□□□□ -0.86
PRKCB-208ENST00000487674 NFX1Q12986 1120 aaKnown RBP9.69□□□□□ -0.86
PRKCB-208ENST00000487674 TMEM266Q2M3C6 531 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 WDR81Q562E7 1941 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 ZNF484Q5JVG2 852 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 JAKMIP3Q5VZ66 844 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 ZNF746Q6NUN9 644 aaPredicted RBP9.69□□□□□ -0.86
PRKCB-208ENST00000487674 SKAP1Q86WV1 359 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 SMAP1Q8IYB5 467 aaPredicted RBP9.69□□□□□ -0.86
PRKCB-208ENST00000487674 KIAA0319LQ8IZA0 1049 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 KLHL23Q8NBE8 558 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 TMEM40Q8WWA1 233 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 ZNF577Q9BSK1 485 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 ADAM33Q9BZ11 813 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 ZMYND12Q9H0C1 365 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 C6orf50Q9HD87 102 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 C1orf112Q9NSG2 853 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 TBC1D22BQ9NU19 505 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 TCEAL9Q9UHQ7 104 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 CD207Q9UJ71 328 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 GINS2Q9Y248 185 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 PCDHB7Q9Y5E2 793 aa9.69□□□□□ -0.86
PRKCB-208ENST00000487674 PIEZO1Q92508 2521 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 DENND3A2RUS2 1198 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 GPR182O15218 404 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 LINC01565O15544 149 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 MGEA5O60502 916 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 GNA11P29992 359 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 GTF2F1P35269 517 aaKnown RBP eCLIP9.68□□□□□ -0.86
PRKCB-208ENST00000487674 IRS1P35568 1242 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 ADD1P35611 737 aaKnown RBP9.68□□□□□ -0.86
PRKCB-208ENST00000487674 NDUFV1P49821 464 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 UBE3AQ05086 875 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 APOBRQ0VD83 1088 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 ADAM15Q13444 863 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 CLUL1Q15846 466 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 CSPP1Q1MSJ5 1256 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 SWSAP1Q6NVH7 229 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 SLC24A5Q71RS6 500 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 CKAP2LQ8IYA6 745 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 EFHBQ8N7U6 833 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 SPPL3Q8TCT6 385 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 POF1BQ8WVV4 589 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 KCNB2Q92953 911 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 FAM167AQ96KS9 214 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 ADAM2Q99965 735 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 UPF3BQ9BZI7 483 aaKnown RBP9.68□□□□□ -0.86
PRKCB-208ENST00000487674 IGFLR1Q9H665 355 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 RGS18Q9NS28 235 aa9.68□□□□□ -0.86
PRKCB-208ENST00000487674 ST3GAL5Q9UNP4 418 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms