RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 CRBNQ96SW2 442 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 C17orf80Q9BSJ5 609 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 SEZ6LQ9BYH1 1024 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 AP5M1Q9H0R1 490 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 VCPKMTQ9H867 229 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 COPRSQ9NQ92 184 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 CLDND1Q9NY35 253 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 RIPK3Q9Y572 518 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 COL11A1P12107 1806 aaPredicted RBP6.45□□□□□ -1.38
PTPN4-210ENST00000485247 FOCADQ5VW36 1801 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 RBAK-RBAKDNI3L0D1 243 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 STXBP3O00186 592 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 WDR46O15213 610 aaKnown RBP6.44□□□□□ -1.38
PTPN4-210ENST00000485247 UBTFL1P0CB47 393 aaPredicted RBP6.44□□□□□ -1.38
PTPN4-210ENST00000485247 EDN3P14138 238 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 GLB1P16278 677 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 CYP7A1P22680 504 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 AVPR2P30518 371 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 ZXDAP98168 799 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 PTPROQ16827 1216 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 SNRNP48Q6IEG0 339 aaKnown RBP6.44□□□□□ -1.38
PTPN4-210ENST00000485247 SIAH1Q8IUQ4 282 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 ADSSL1Q8N142 457 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 ANKRD35Q8N283 1001 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 REPS2Q8NFH8 660 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.44□□□□□ -1.38
PTPN4-210ENST00000485247 PPP1R13LQ8WUF5 828 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 FGD4Q96M96 766 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 RAD9AQ99638 391 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 BHLHE41Q9C0J9 482 aaPredicted RBP6.44□□□□□ -1.38
PTPN4-210ENST00000485247 KATNBL1Q9H079 304 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 CTNNA3Q9UI47 895 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 PPP1R9AQ9ULJ8 1098 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 GNEQ9Y223 722 aaKnown RBP6.44□□□□□ -1.38
PTPN4-210ENST00000485247 TMX2Q9Y320 296 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 PLXNA3P51805 1871 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 MYH1P12882 1939 aa6.44□□□□□ -1.38
PTPN4-210ENST00000485247 KMT2EQ8IZD2 1858 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 DCHS1Q96JQ0 3298 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 METTL12A8MUP2 240 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 MBTPS2O43462 519 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 GJB5O95377 273 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 UQCRFS1P1P0C7P4 283 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 LTBRP36941 435 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 ICA1Q05084 483 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 GABPAQ06546 454 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 DLX2Q07687 328 aaPredicted RBP6.43□□□□□ -1.38
PTPN4-210ENST00000485247 DDX10Q13206 875 aaKnown RBP6.43□□□□□ -1.38
PTPN4-210ENST00000485247 TIGD5Q53EQ6 642 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 FAM47CQ5HY64 1035 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 TMEM63BQ5T3F8 832 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 TMEM179Q6ZVK1 233 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 DGLUCYQ7Z3D6 616 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 RPAINQ86UA6 219 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 WDR63Q8IWG1 891 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 CPXCR1Q8N123 301 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 ARMC10Q8N2F6 343 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 MAGEB6Q8N7X4 407 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 WNT8BQ93098 351 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 TEX13BQ9BXU2 312 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 NSUN3Q9H649 340 aaKnown RBP6.43□□□□□ -1.38
PTPN4-210ENST00000485247 SH2D4AQ9H788 454 aa6.43□□□□□ -1.38
PTPN4-210ENST00000485247 PTPRSQ13332 1948 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 MCM3APO60318 1980 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 CACNA1HO95180 2353 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 PARP14Q460N5 1801 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 AKR1B1P15121 316 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 NBL1P41271 181 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 NLRP12P59046 1061 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 CNTN2Q02246 1040 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 SIGLEC14Q08ET2 396 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 BFSP2Q13515 415 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 COL19A1Q14993 1142 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 DUOXA2Q1HG44 320 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 TTC39AQ5SRH9 613 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 FAM83BQ5T0W9 1011 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 EEPD1Q7L9B9 569 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 TET1Q8NFU7 2136 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 SLC7A3Q8WY07 619 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 BSNDQ8WZ55 320 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 NKD2Q969F2 451 aaPredicted RBP6.42□□□□□ -1.38
PTPN4-210ENST00000485247 RMDN1Q96DB5 314 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 FAM129BQ96TA1 746 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 OSGEPQ9NPF4 335 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 PIH1D3Q9NQM4 214 aaKnown RBP6.42□□□□□ -1.38
PTPN4-210ENST00000485247 PDGFCQ9NRA1 345 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 BRPF3Q9ULD4 1205 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 DDX49Q9Y6V7 483 aaKnown RBP6.42□□□□□ -1.38
PTPN4-210ENST00000485247 RIF1Q5UIP0 2472 aaKnown RBP6.42□□□□□ -1.38
PTPN4-210ENST00000485247 TRIOO75962 3097 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 FAM186AA6NE01 2351 aa6.42□□□□□ -1.38
PTPN4-210ENST00000485247 SIP14410 1827 aa6.41□□□□□ -1.38
PTPN4-210ENST00000485247 SRGAP3O43295 1099 aa6.41□□□□□ -1.38
PTPN4-210ENST00000485247 IDH1O75874 414 aaKnown RBP6.41□□□□□ -1.38
PTPN4-210ENST00000485247 MYL3P08590 195 aa6.41□□□□□ -1.38
PTPN4-210ENST00000485247 EEF2P13639 858 aaKnown RBP6.41□□□□□ -1.38
PTPN4-210ENST00000485247 CHMP4BP1P59074 171 aa6.41□□□□□ -1.38
PTPN4-210ENST00000485247 PURAQ00577 322 aaKnown RBP6.41□□□□□ -1.38
PTPN4-210ENST00000485247 SMAD4Q13485 552 aaKnown RBP6.41□□□□□ -1.38
PTPN4-210ENST00000485247 GPM6BQ13491 265 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms