RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 RCAN3Q9UKA8 241 aa5.8□□□□□ -1.48
VPS13A-211ENST00000484581 ZBTB21Q9ULJ3 1066 aa5.8□□□□□ -1.48
VPS13A-211ENST00000484581 K7ESM1 405 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 PCDHGA12O60330 932 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 HIP1RO75146 1068 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 PLA2G1BP04054 148 aaKnown RBP5.79□□□□□ -1.48
VPS13A-211ENST00000484581 ASGR2P07307 311 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 GNAT1P11488 350 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 JAM2P57087 298 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 SMAD3P84022 425 aaKnown RBP5.79□□□□□ -1.48
VPS13A-211ENST00000484581 EFEMP1Q12805 493 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 ODF1Q14990 250 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 SMAD2Q15796 467 aaKnown RBP5.79□□□□□ -1.48
VPS13A-211ENST00000484581 C4orf46Q504U0 113 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 HABP4Q5JVS0 413 aaKnown RBP5.79□□□□□ -1.48
VPS13A-211ENST00000484581 SAPCD2Q86UD0 394 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 NOSTRINQ8IVI9 506 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 AMOTL1Q8IY63 956 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 LZTR1Q8N653 840 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 LMBR1Q8WVP7 490 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 GPR20Q99678 358 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 KCNJ15Q99712 375 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 ZDHHC5Q9C0B5 715 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 TMPRSS5Q9H3S3 457 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 PCIF1Q9H4Z3 704 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 TOPORSQ9NS56 1045 aaPredicted RBP5.79□□□□□ -1.48
VPS13A-211ENST00000484581 NUDT5Q9UKK9 219 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 PALD1Q9ULE6 856 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 PLA2G2DQ9UNK4 145 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 PCDHGA9Q9Y5G4 932 aaKnown RBP5.79□□□□□ -1.48
VPS13A-211ENST00000484581 PCDHGA8Q9Y5G5 932 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 PCDHGA7Q9Y5G6 932 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 PCDHGA6Q9Y5G7 932 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 PCDHGA3Q9Y5H0 932 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 PCDHGA2Q9Y5H1 932 aa5.79□□□□□ -1.48
VPS13A-211ENST00000484581 SH3D21A4FU49 640 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 IFRD1O00458 451 aaPredicted RBP5.78□□□□□ -1.48
VPS13A-211ENST00000484581 XPOTO43592 962 aaKnown RBP5.78□□□□□ -1.48
VPS13A-211ENST00000484581 IL33O95760 270 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 AMY2AP04746 511 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 NBPF7P0C2Y1 421 aaPredicted RBP5.78□□□□□ -1.48
VPS13A-211ENST00000484581 GLI4P10075 376 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 PHKG2P15735 406 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 SLC9A1P19634 815 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 AMY2BP19961 511 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 MC3RP41968 323 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 SPIRE1Q08AE8 756 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 FIGNQ5HY92 759 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 EFCAB2Q5VUJ9 269 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 B3GNT8Q7Z7M8 397 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 OSTM1Q86WC4 334 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 ZZZ3Q8IYH5 903 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 PJA1Q8NG27 643 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 TTC17Q96AE7 1141 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 TIFAQ96CG3 184 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 IL17RAQ96F46 866 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 PEX11GQ96HA9 241 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 TMEM169Q96HH4 297 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 ELF4Q99607 663 aaPredicted RBP5.78□□□□□ -1.48
VPS13A-211ENST00000484581 EPB41L1Q9H4G0 881 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 RXFP1Q9HBX9 757 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 NMRK2Q9NPI5 230 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 ANLNQ9NQW6 1124 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 TOMM22Q9NS69 142 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 CCM2LQ9NUG4 571 aaPredicted RBP5.78□□□□□ -1.48
VPS13A-211ENST00000484581 INVSQ9Y283 1065 aa5.78□□□□□ -1.48
VPS13A-211ENST00000484581 NOC2LQ9Y3T9 749 aaKnown RBP5.78□□□□□ -1.48
VPS13A-211ENST00000484581 KLHL33A6NCF5 533 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 GOLGA8AA7E2F4 631 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 GOLGA8BA8MQT2 603 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 DVL2O14641 736 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 KDM1AO60341 852 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 H2AFYO75367 372 aaKnown RBP5.77□□□□□ -1.49
VPS13A-211ENST00000484581 ZRANB2O95218 330 aaKnown RBP eCLIP5.77□□□□□ -1.49
VPS13A-211ENST00000484581 IFIT2P09913 472 aaKnown RBP5.77□□□□□ -1.49
VPS13A-211ENST00000484581 HSPA6P17066 643 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 KRT15P19012 456 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 GPR3P46089 330 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 KIF11P52732 1056 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 SCAND1P57086 179 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 GJA9P57773 515 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 HTRA3P83110 453 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 PICALMQ13492 652 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 GRM3Q14832 879 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 SLC9A5Q14940 896 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 ARHGAP36Q6ZRI8 547 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 SSH1Q8WYL5 1049 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 DPF3Q92784 378 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 RUNDC1Q96C34 613 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 TSPAN17Q96FV3 270 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 TEKT5Q96M29 485 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 ACAP3Q96P50 834 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 ORAI2Q96SN7 254 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 JAM3Q9BX67 310 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 BCAS3Q9H6U6 928 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 ACSS2Q9NR19 701 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 CNOT11Q9UKZ1 510 aaKnown RBP5.77□□□□□ -1.49
VPS13A-211ENST00000484581 SRPK3Q9UPE1 567 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 RWDD3Q9Y3V2 267 aa5.77□□□□□ -1.49
VPS13A-211ENST00000484581 X6R8D5 127 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms