RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-211	ENST00000475835	NUDT12	Q9BQG2	462 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	DESI2	Q9BSY9	194 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	IFIH1	Q9BYX4	1025 aa	Known RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	SHCBP1L	Q9BZQ2	653 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	NDEL1	Q9GZM8	345 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	GLT8D2	Q9H1C3	349 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	VCX	Q9H320	206 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	EHD1	Q9H4M9	534 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ELAC1	Q9H777	363 aa	Known RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ZCCHC17	Q9NP64	241 aa	Known RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	POLE3	Q9NRF9	147 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	SDHAF3	Q9NRP4	125 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	FARSB	Q9NSD9	589 aa	Known RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	TBC1D22B	Q9NU19	505 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ARMC1	Q9NVT9	282 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	RMND1	Q9NWS8	449 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ORC3	Q9UBD5	711 aa	Predicted RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	PPARGC1A	Q9UBK2	798 aa	Known RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	TNFRSF10D	Q9UBN6	386 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	TRIM10	Q9UDY6	481 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	HMGXB4	Q9UGU5	601 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	SAP30BP	Q9UHR5	308 aa	Known RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	CHMP2B	Q9UQN3	213 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	EXOC6B	Q9Y2D4	811 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	RTCB	Q9Y3I0	505 aa	Known RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	PCDHB6	Q9Y5E3	794 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	SNCAIP	Q9Y6H5	919 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	NUMBL	Q9Y6R0	609 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ABCA9	Q8IUA7	1624 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ADGRL1	O94910	1474 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	TTC41P	Q6P2S7	1318 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	SBNO1	A3KN83	1393 aa		4.15	□□□□□ -1.74
LSM2-211	ENST00000475835	POLR3A	O14802	1390 aa	Predicted RBP	4.15	□□□□□ -1.74
LSM2-211	ENST00000475835	VWDE	Q8N2E2	1590 aa		4.15	□□□□□ -1.74
LSM2-211	ENST00000475835	NSD3	Q9BZ95	1437 aa		4.15	□□□□□ -1.74
LSM2-211	ENST00000475835	GOLGA8Q	A0A0J9YX86	632 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	C1orf232	A0A0U1RR37	186 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	WDR91	A4D1P6	747 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	GOLGA8O	A6NCC3	632 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	SNTN	A6NMZ2	147 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	TTLL13P	A6NNM8	815 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	SYCE1L	A8MT33	242 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	FAM47E-STBD1	D6RA91	191 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	GOLGA8N	F8WBI6	632 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	SLC7A4	O43246	635 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	HOXC11	O43248	304 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	ATMIN	O43313	823 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	PRPF3	O43395	683 aa	Known RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	SPOP	O43791	374 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	BCAR3	O75815	825 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	FGF18	O76093	207 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	INMT	O95050	263 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	POP4	O95707	220 aa	Known RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	AGR2	O95994	175 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	EGFR	P00533	1210 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	MYC	P01106	439 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	CYP2E1	P05181	493 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	P4HA1	P13674	534 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	STMN1	P16949	149 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	SYN1	P17600	705 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	TNFAIP3	P21580	790 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	NOS3	P29474	1203 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	GBP1	P32455	592 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	LSP1	P33241	339 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	KRT20	P35900	424 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	STT3A	P46977	705 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	KRT6C	P48668	564 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	HSPA13	P48723	471 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	PLCD1	P51178	756 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	CCNG1	P51959	295 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	GSDMD	P57764	484 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	BPIFB4	P59827	614 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	MXRA7	P84157	204 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	PLOD1	Q02809	727 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	ACTN3	Q08043	901 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	PPFIA1	Q13136	1202 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	ITGB3BP	Q13352	177 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	CUL1	Q13616	776 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	GNL2	Q13823	731 aa	Known RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	NR1D2	Q14995	579 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	LETM2	Q2VYF4	491 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	ZNF792	Q3KQV3	632 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	SETMAR	Q53H47	684 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	KRBOX4	Q5JUW0	171 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	SLC27A3	Q5K4L6	730 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	TTC39A	Q5SRH9	613 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	PPP1R15B	Q5SWA1	713 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	INTS11	Q5TA45	600 aa	Known RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	AADACL4	Q5VUY2	407 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	C9orf131	Q5VYM1	1079 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	PPP1R18	Q6NYC8	613 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	ZNF704	Q6ZNC4	412 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	METTL3	Q86U44	580 aa	Known RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	PALM2	Q8IXS6	379 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	HACE1	Q8IYU2	909 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	SPICE1	Q8N0Z3	855 aa		4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	GPR161	Q8N6U8	529 aa	Known RBP	4.15	□□□□□ -1.75
LSM2-211	ENST00000475835	KCT2	Q8NC54	265 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms