RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 DYNC1LI2O43237 492 aaPredicted RBP14.12□□□□□ -0.15
TRAF4-208ENST00000469529 ADCY3O60266 1144 aa14.12□□□□□ -0.15
TRAF4-208ENST00000469529 TBCAO75347 108 aaKnown RBP14.12□□□□□ -0.15
TRAF4-208ENST00000469529 HMGCRP04035 888 aa14.12□□□□□ -0.15
TRAF4-208ENST00000469529 LGALS2P05162 132 aa14.12□□□□□ -0.15
TRAF4-208ENST00000469529 MMP3P08254 477 aa14.12□□□□□ -0.15
TRAF4-208ENST00000469529 IDEP14735 1019 aa14.12□□□□□ -0.15
TRAF4-208ENST00000469529 CD44P16070 742 aaKnown RBP14.12□□□□□ -0.15
TRAF4-208ENST00000469529 ABCD1P33897 745 aa14.12□□□□□ -0.15
TRAF4-208ENST00000469529 CPT1AP50416 773 aa14.12□□□□□ -0.15
TRAF4-208ENST00000469529 CACNB2Q08289 660 aaPredicted RBP14.12□□□□□ -0.15
TRAF4-208ENST00000469529 ALCAMQ13740 583 aa14.12□□□□□ -0.15
TRAF4-208ENST00000469529 BMT2Q1RMZ1 405 aa14.12□□□□□ -0.15
TRAF4-208ENST00000469529 UTP14CQ5TAP6 766 aaKnown RBP14.12□□□□□ -0.15
TRAF4-208ENST00000469529 CENPPQ6IPU0 288 aa14.12□□□□□ -0.15
TRAF4-208ENST00000469529 ZNF720Q7Z2F6 126 aa14.12□□□□□ -0.15
TRAF4-208ENST00000469529 KIAA0895Q8NCT3 520 aa14.12□□□□□ -0.15
TRAF4-208ENST00000469529 OR6J1Q8NGC5 347 aa14.12□□□□□ -0.15
TRAF4-208ENST00000469529 ZNF507Q8TCN5 953 aa14.12□□□□□ -0.15
TRAF4-208ENST00000469529 TMEM174Q8WUU8 243 aa14.12□□□□□ -0.15
TRAF4-208ENST00000469529 SPIRE2Q8WWL2 714 aa14.12□□□□□ -0.15
TRAF4-208ENST00000469529 MED15Q96RN5 788 aa14.12□□□□□ -0.15
TRAF4-208ENST00000469529 FIZ1Q96SL8 496 aa14.12□□□□□ -0.15
TRAF4-208ENST00000469529 LARSQ9P2J5 1176 aaKnown RBP14.12□□□□□ -0.15
TRAF4-208ENST00000469529 NPHP3-ACAD11A0A0J9YXS1 232 aa14.11□□□□□ -0.15
TRAF4-208ENST00000469529 ZBTB42B2RXF5 422 aa14.11□□□□□ -0.15
TRAF4-208ENST00000469529 H3BRB1 525 aa14.11□□□□□ -0.15
TRAF4-208ENST00000469529 PSMA7O14818 248 aa14.11□□□□□ -0.15
TRAF4-208ENST00000469529 PLS3P13797 630 aa14.11□□□□□ -0.15
TRAF4-208ENST00000469529 CCNE1P24864 410 aa14.11□□□□□ -0.15
TRAF4-208ENST00000469529 MYL5Q02045 173 aa14.11□□□□□ -0.15
TRAF4-208ENST00000469529 GJC2Q5T442 439 aaPredicted RBP14.11□□□□□ -0.15
TRAF4-208ENST00000469529 SPATA1Q5VX52 437 aa14.11□□□□□ -0.15
TRAF4-208ENST00000469529 TLK2Q86UE8 772 aa14.11□□□□□ -0.15
TRAF4-208ENST00000469529 SLAIN1Q8ND83 568 aa14.11□□□□□ -0.15
TRAF4-208ENST00000469529 ZNF333Q96JL9 665 aa14.11□□□□□ -0.15
TRAF4-208ENST00000469529 CCDC43Q96MW1 224 aaKnown RBP14.11□□□□□ -0.15
TRAF4-208ENST00000469529 AP5M1Q9H0R1 490 aa14.11□□□□□ -0.15
TRAF4-208ENST00000469529 TUT1Q9H6E5 874 aaKnown RBP14.11□□□□□ -0.15
TRAF4-208ENST00000469529 XPNPEP1Q9NQW7 623 aa14.11□□□□□ -0.15
TRAF4-208ENST00000469529 PLXNA1Q9UIW2 1896 aa14.11□□□□□ -0.15
TRAF4-208ENST00000469529 ZNF215Q9UL58 517 aaPredicted RBP14.11□□□□□ -0.15
TRAF4-208ENST00000469529 COL1A2P08123 1366 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 DOCK3Q8IZD9 2030 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 BICDL2A1A5D9 508 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 BECN2A8MW95 431 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 HAS3O00219 553 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 EIF3DO15371 548 aaKnown RBP eCLIP14.1□□□□□ -0.15
TRAF4-208ENST00000469529 MAGEB2O15479 319 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 HIP1RO75146 1068 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 FAM13AO94988 1023 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 ARL2P36404 184 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 PAK1Q13153 545 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 STXBP4Q6ZWJ1 553 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 LUZP1Q86V48 1076 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 MYOCDQ8IZQ8 938 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 MYCT1Q8N699 235 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 RAET1EQ8TD07 263 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 SLC7A3Q8WY07 619 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 TMEM106CQ9BVX2 250 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 ATP6V0A4Q9HBG4 840 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 SLC39A2Q9NP94 309 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 SEPT9Q9UHD8 586 aaPredicted RBP14.1□□□□□ -0.15
TRAF4-208ENST00000469529 GDAQ9Y2T3 454 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 PCDHB13Q9Y5F0 798 aa14.1□□□□□ -0.15
TRAF4-208ENST00000469529 RRN3P2A6NIE6 340 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 LRRC10BA6NIK2 292 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 SORBS3O60504 671 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 MSCO60682 206 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 PPP1R37O75864 691 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 F2P00734 622 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 CST5P28325 142 aaPredicted RBP14.09□□□□□ -0.15
TRAF4-208ENST00000469529 SNRPFP62306 86 aaKnown RBP14.09□□□□□ -0.15
TRAF4-208ENST00000469529 GTF2BQ00403 316 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 LRRC63Q05C16 580 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 POU5F1BQ06416 359 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 FSCN1Q16658 493 aaKnown RBP14.09□□□□□ -0.15
TRAF4-208ENST00000469529 IER5Q5VY09 327 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 PLA2G4FQ68DD2 849 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 SARM1Q6SZW1 724 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 SFR1Q86XK3 245 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 RNF214Q8ND24 703 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 SH3TC2Q8TF17 1288 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 NOC3LQ8WTT2 800 aaKnown RBP14.09□□□□□ -0.15
TRAF4-208ENST00000469529 SCFD1Q8WVM8 642 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 TCP11Q8WWU5 503 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 KAT2BQ92831 832 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 P2RX5Q93086 422 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 HSD3B7Q9H2F3 369 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 RNPEPQ9H4A4 650 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 SPC25Q9HBM1 224 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 UBE4BO95155 1302 aa14.09□□□□□ -0.15
TRAF4-208ENST00000469529 MGAMO43451 1857 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 HTTP42858 3142 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 TMEM150BA6NC51 233 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 SFI1A8K8P3 1242 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 RSPH10B2B2RC85 870 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 H0YCG3 227 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 GOLGA6L19H0YKK7 550 aa14.08□□□□□ -0.16
TRAF4-208ENST00000469529 PDXKO00764 312 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms