RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 RNF10Q8N5U6 811 aaKnown RBP14.89□□□□□ -0.03
BRAT1-203ENST00000467558 HPS3Q969F9 1004 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 FAM163AQ96GL9 167 aaPredicted RBP14.89□□□□□ -0.03
BRAT1-203ENST00000467558 EIF3CLB5ME19 914 aaKnown RBP14.89□□□□□ -0.03
BRAT1-203ENST00000467558 FAM71BQ8TC56 605 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 RIT2Q99578 217 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 EIF3CQ99613 913 aaKnown RBP14.89□□□□□ -0.03
BRAT1-203ENST00000467558 PARD6BQ9BYG5 372 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 GOLGA8SH3BPF8 625 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 RFX1P22670 979 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 YWHABP31946 246 aaKnown RBP14.89□□□□□ -0.03
BRAT1-203ENST00000467558 HHATQ5VTY9 493 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 KCNV1Q6PIU1 500 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 PALM2Q8IXS6 379 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 FAM213AQ9BRX8 229 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 C2orf40Q9H1Z8 148 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 HOMER3Q9NSC5 361 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 GGA3Q9NZ52 723 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 PPFIA4O75335 1185 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 NR3C2P08235 984 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 PHKA2P46019 1235 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 MICALL1Q8N3F8 863 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 SNX25Q9H3E2 840 aa14.89□□□□□ -0.03
BRAT1-203ENST00000467558 PHBP35232 272 aa14.88□□□□□ -0.03
BRAT1-203ENST00000467558 Q3C1V9 767 aa14.88□□□□□ -0.03
BRAT1-203ENST00000467558 ZNF667Q5HYK9 610 aa14.88□□□□□ -0.03
BRAT1-203ENST00000467558 KRT39Q6A163 491 aa14.88□□□□□ -0.03
BRAT1-203ENST00000467558 CATSPER4Q7RTX7 472 aa14.88□□□□□ -0.03
BRAT1-203ENST00000467558 DEFB132Q7Z7B7 95 aa14.88□□□□□ -0.03
BRAT1-203ENST00000467558 HPSEQ9Y251 543 aa14.88□□□□□ -0.03
BRAT1-203ENST00000467558 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.88□□□□□ -0.03
BRAT1-203ENST00000467558 TOB1P50616 345 aaPredicted RBP14.88□□□□□ -0.03
BRAT1-203ENST00000467558 SGO2Q562F6 1265 aa14.88□□□□□ -0.03
BRAT1-203ENST00000467558 FYB2Q5VWT5 728 aa14.88□□□□□ -0.03
BRAT1-203ENST00000467558 MMP19Q99542 508 aa14.88□□□□□ -0.03
BRAT1-203ENST00000467558 PPANQ9NQ55 473 aaKnown RBP14.88□□□□□ -0.03
BRAT1-203ENST00000467558 HAUS2Q9NVX0 235 aa14.88□□□□□ -0.03
BRAT1-203ENST00000467558 SPDYE2BA6NHP3 402 aa14.88□□□□□ -0.03
BRAT1-203ENST00000467558 SPDYE6P0CI01 402 aa14.88□□□□□ -0.03
BRAT1-203ENST00000467558 NMT1P30419 496 aaKnown RBP14.88□□□□□ -0.03
BRAT1-203ENST00000467558 MMP14P50281 582 aa14.88□□□□□ -0.03
BRAT1-203ENST00000467558 NR1I3Q14994 352 aa14.88□□□□□ -0.03
BRAT1-203ENST00000467558 FAM149B1Q96BN6 582 aa14.88□□□□□ -0.03
BRAT1-203ENST00000467558 NBPF3Q9H094 633 aa14.88□□□□□ -0.03
BRAT1-203ENST00000467558 FAM49AQ9H0Q0 323 aaPredicted RBP14.88□□□□□ -0.03
BRAT1-203ENST00000467558 PITPNM2Q9BZ72 1349 aa14.88□□□□□ -0.03
BRAT1-203ENST00000467558 A6NJR5 290 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 DGAT1O75907 488 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 IRX5P78411 483 aaPredicted RBP14.87□□□□□ -0.03
BRAT1-203ENST00000467558 EDRF1Q3B7T1 1238 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 CFAP157Q5JU67 520 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 GIMAP7Q8NHV1 300 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 CABS1Q96KC9 395 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 REEP2Q9BRK0 252 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 POLR3FQ9H1D9 316 aaPredicted RBP14.87□□□□□ -0.03
BRAT1-203ENST00000467558 PDE11AQ9HCR9 933 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 ITIH6Q6UXX5 1313 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 FMN2Q9NZ56 1722 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 NFAT5O94916 1531 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 ASB14A6NK59 587 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 PLSCR1O15162 318 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 MAFGO15525 162 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 ZMYND10O75800 440 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 ZSCAN20P17040 1043 aaPredicted RBP14.87□□□□□ -0.03
BRAT1-203ENST00000467558 CAP2P40123 477 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 C2orf54Q08AI8 447 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 ST3GAL1Q11201 340 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 CCDC6Q16204 474 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 XKR3Q5GH77 459 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 RINT1Q6NUQ1 792 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 SAMD7Q7Z3H4 446 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 CTAGE3PQ8IX95 158 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 ZNF526Q8TF50 670 aaPredicted RBP14.87□□□□□ -0.03
BRAT1-203ENST00000467558 SCINQ9Y6U3 715 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 CCDC188H7C350 402 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 MNAT1P51948 309 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 TNFAIP2Q03169 654 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 DRAP1Q14919 205 aaPredicted RBP14.87□□□□□ -0.03
BRAT1-203ENST00000467558 C7orf31Q8N865 590 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 PPP1R16BQ96T49 567 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 MKRN1Q9UHC7 482 aaKnown RBP14.87□□□□□ -0.03
BRAT1-203ENST00000467558 TTLL3Q9Y4R7 772 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 NRXN3Q9Y4C0 1643 aa14.87□□□□□ -0.03
BRAT1-203ENST00000467558 MIF4GDA9UHW6 222 aaKnown RBP14.86□□□□□ -0.03
BRAT1-203ENST00000467558 GFPT1Q06210 699 aaPredicted RBP14.86□□□□□ -0.03
BRAT1-203ENST00000467558 XRRA1Q6P2D8 792 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 PKNOX2Q96KN3 472 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 MXRA8Q9BRK3 442 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 PKN1Q16512 942 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 ZNF568Q3ZCX4 644 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 SPOUT1Q5T280 376 aaKnown RBP14.86□□□□□ -0.03
BRAT1-203ENST00000467558 RBM43Q6ZSC3 357 aaKnown RBP14.86□□□□□ -0.03
BRAT1-203ENST00000467558 RIOX1Q9H6W3 641 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 SLIT3O75094 1523 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 USP27XA6NNY8 438 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 SLC16A3O15427 465 aaKnown RBP14.86□□□□□ -0.03
BRAT1-203ENST00000467558 PALMO75781 387 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 ECEL1O95672 775 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 DDR1Q08345 913 aa14.86□□□□□ -0.03
BRAT1-203ENST00000467558 GMCL1Q96IK5 515 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms