RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 TBC1D8BQ0IIM8 1120 aa11.44□□□□□ -0.58
SF3A3-204ENST00000462258 NFX1Q12986 1120 aaKnown RBP11.44□□□□□ -0.58
SF3A3-204ENST00000462258 PPP2R5CQ13362 524 aa11.44□□□□□ -0.58
SF3A3-204ENST00000462258 SKIV2LQ15477 1246 aaKnown RBP11.44□□□□□ -0.58
SF3A3-204ENST00000462258 MTERF2Q49AM1 385 aa11.44□□□□□ -0.58
SF3A3-204ENST00000462258 XKR3Q5GH77 459 aa11.44□□□□□ -0.58
SF3A3-204ENST00000462258 FAM228AQ86W67 206 aa11.44□□□□□ -0.58
SF3A3-204ENST00000462258 NPAS4Q8IUM7 802 aa11.44□□□□□ -0.58
SF3A3-204ENST00000462258 DIS3L2Q8IYB7 885 aaKnown RBP11.44□□□□□ -0.58
SF3A3-204ENST00000462258 LINC01465Q8N7H1 131 aa11.44□□□□□ -0.58
SF3A3-204ENST00000462258 FAM20AQ96MK3 541 aa11.44□□□□□ -0.58
SF3A3-204ENST00000462258 TMX1Q9H3N1 280 aa11.44□□□□□ -0.58
SF3A3-204ENST00000462258 ERVK-5Q9HDB9 667 aa11.44□□□□□ -0.58
SF3A3-204ENST00000462258 LIMCH1Q9UPQ0 1083 aa11.44□□□□□ -0.58
SF3A3-204ENST00000462258 NOC2LQ9Y3T9 749 aaKnown RBP11.44□□□□□ -0.58
SF3A3-204ENST00000462258 TMEM150BA6NC51 233 aa11.43□□□□□ -0.58
SF3A3-204ENST00000462258 BTBD18B2RXH4 712 aa11.43□□□□□ -0.58
SF3A3-204ENST00000462258 TBX3O15119 743 aa11.43□□□□□ -0.58
SF3A3-204ENST00000462258 MARCH6O60337 910 aa11.43□□□□□ -0.58
SF3A3-204ENST00000462258 GPR32O75388 356 aa11.43□□□□□ -0.58
SF3A3-204ENST00000462258 IBSPP21815 317 aaPredicted RBP11.43□□□□□ -0.58
SF3A3-204ENST00000462258 CTNNB1P35222 781 aa11.43□□□□□ -0.58
SF3A3-204ENST00000462258 PSMC5P62195 406 aa11.43□□□□□ -0.58
SF3A3-204ENST00000462258 BTG3Q14201 252 aaPredicted RBP11.43□□□□□ -0.58
SF3A3-204ENST00000462258 EPC2Q52LR7 807 aa11.43□□□□□ -0.58
SF3A3-204ENST00000462258 TJAP1Q5JTD0 557 aa11.43□□□□□ -0.58
SF3A3-204ENST00000462258 ODR4Q5SWX8 454 aa11.43□□□□□ -0.58
SF3A3-204ENST00000462258 EFCAB12Q6NXP0 572 aa11.43□□□□□ -0.58
SF3A3-204ENST00000462258 FIBCD1Q8N539 461 aa11.43□□□□□ -0.58
SF3A3-204ENST00000462258 HAS1Q92839 578 aa11.43□□□□□ -0.58
SF3A3-204ENST00000462258 SCLT1Q96NL6 688 aa11.43□□□□□ -0.58
SF3A3-204ENST00000462258 KIF2CQ99661 725 aa11.43□□□□□ -0.58
SF3A3-204ENST00000462258 CDHR5Q9HBB8 845 aa11.43□□□□□ -0.58
SF3A3-204ENST00000462258 PLXNA4Q9HCM2 1894 aa11.42□□□□□ -0.58
SF3A3-204ENST00000462258 DENND3A2RUS2 1198 aa11.42□□□□□ -0.58
SF3A3-204ENST00000462258 EML1O00423 815 aa11.42□□□□□ -0.58
SF3A3-204ENST00000462258 GPR182O15218 404 aa11.42□□□□□ -0.58
SF3A3-204ENST00000462258 MGEA5O60502 916 aa11.42□□□□□ -0.58
SF3A3-204ENST00000462258 DGKIO75912 1065 aa11.42□□□□□ -0.58
SF3A3-204ENST00000462258 STAG3L1P0CL83 205 aa11.42□□□□□ -0.58
SF3A3-204ENST00000462258 QARSP47897 775 aaKnown RBP11.42□□□□□ -0.58
SF3A3-204ENST00000462258 RBM25P49756 843 aaKnown RBP11.42□□□□□ -0.58
SF3A3-204ENST00000462258 GPC3P51654 580 aa11.42□□□□□ -0.58
SF3A3-204ENST00000462258 NLRP11P59045 1033 aaKnown RBP11.42□□□□□ -0.58
SF3A3-204ENST00000462258 TARBP2Q15633 366 aaKnown RBP11.42□□□□□ -0.58
SF3A3-204ENST00000462258 PLA2G4FQ68DD2 849 aa11.42□□□□□ -0.58
SF3A3-204ENST00000462258 NCAPH2Q6IBW4 605 aa11.42□□□□□ -0.58
SF3A3-204ENST00000462258 RTN4RL1Q86UN2 441 aaPredicted RBP11.42□□□□□ -0.58
SF3A3-204ENST00000462258 TMEM192Q8IY95 271 aa11.42□□□□□ -0.58
SF3A3-204ENST00000462258 SLFN12Q8IYM2 578 aa11.42□□□□□ -0.58
SF3A3-204ENST00000462258 ATXN2LQ8WWM7 1075 aaKnown RBP11.42□□□□□ -0.58
SF3A3-204ENST00000462258 ZNF689Q96CS4 500 aaPredicted RBP11.42□□□□□ -0.58
SF3A3-204ENST00000462258 ZSCAN31Q96LW9 406 aaPredicted RBP11.42□□□□□ -0.58
SF3A3-204ENST00000462258 SH2D3AQ9BRG2 576 aa11.42□□□□□ -0.58
SF3A3-204ENST00000462258 LLPHQ9BRT6 129 aaKnown RBP11.42□□□□□ -0.58
SF3A3-204ENST00000462258 LXNQ9BS40 222 aa11.42□□□□□ -0.58
SF3A3-204ENST00000462258 NIFKQ9BYG3 293 aaKnown RBP11.42□□□□□ -0.58
SF3A3-204ENST00000462258 SH2B1Q9NRF2 756 aaPredicted RBP11.42□□□□□ -0.58
SF3A3-204ENST00000462258 LMCD1Q9NZU5 365 aa11.42□□□□□ -0.58
SF3A3-204ENST00000462258 LRFN2Q9ULH4 789 aa11.42□□□□□ -0.58
SF3A3-204ENST00000462258 ST3GAL5Q9UNP4 418 aa11.42□□□□□ -0.58
SF3A3-204ENST00000462258 RWDD3Q9Y3V2 267 aa11.42□□□□□ -0.58
SF3A3-204ENST00000462258 MUC3AQ02505 3323 aa11.42□□□□□ -0.58
SF3A3-204ENST00000462258 BRWD1Q9NSI6 2320 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 TTC28Q96AY4 2481 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 H3BNC9 293 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 NEMFO60524 1076 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 DKC1O60832 514 aaKnown RBP eCLIP11.41□□□□□ -0.58
SF3A3-204ENST00000462258 STBD1O95210 358 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 BAG4O95429 457 aaKnown RBP11.41□□□□□ -0.58
SF3A3-204ENST00000462258 LINC00271P0C7V0 271 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 SARSP49591 514 aaKnown RBP11.41□□□□□ -0.58
SF3A3-204ENST00000462258 HMGN5P82970 282 aaKnown RBP11.41□□□□□ -0.58
SF3A3-204ENST00000462258 GUCY1B3Q02153 619 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 SPIRE1Q08AE8 756 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 DRP2Q13474 957 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 GPM6BQ13491 265 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 RABEP1Q15276 862 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 SAFBQ15424 915 aaKnown RBP eCLIP11.41□□□□□ -0.58
SF3A3-204ENST00000462258 CALCRLQ16602 461 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 PTPROQ16827 1216 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 PAN2Q504Q3 1202 aaKnown RBP11.41□□□□□ -0.58
SF3A3-204ENST00000462258 TIGD5Q53EQ6 642 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 FAM43BQ6ZT52 329 aaPredicted RBP11.41□□□□□ -0.58
SF3A3-204ENST00000462258 ANO5Q75V66 913 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 CMTR2Q8IYT2 770 aaKnown RBP11.41□□□□□ -0.58
SF3A3-204ENST00000462258 CRIPAKQ8N1N5 446 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 ZNF710Q8N1W2 664 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 NLRP7Q8WX94 980 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 SYMPKQ92797 1274 aaKnown RBP11.41□□□□□ -0.58
SF3A3-204ENST00000462258 C8orf76Q96K31 380 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 ZNF668Q96K58 619 aaPredicted RBP11.41□□□□□ -0.58
SF3A3-204ENST00000462258 CEP89Q96ST8 783 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 ADAM2Q99965 735 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 ADAMTS10Q9H324 1103 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 C1orf112Q9NSG2 853 aa11.41□□□□□ -0.58
SF3A3-204ENST00000462258 IGKV6-21A0A0C4DH24 114 aa11.4□□□□□ -0.58
SF3A3-204ENST00000462258 DDX11L8A8MPP1 907 aa11.4□□□□□ -0.58
SF3A3-204ENST00000462258 C5orf67F2Z3F1 127 aa11.4□□□□□ -0.58
SF3A3-204ENST00000462258 WNT7AO00755 349 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms