RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 NFX1Q12986 1120 aaKnown RBP21.29■■□□□ 1
COL5A1-203ENST00000460264 PPP2R5CQ13362 524 aa21.29■■□□□ 1
COL5A1-203ENST00000460264 TARBP2Q15633 366 aaKnown RBP21.29■■□□□ 1
COL5A1-203ENST00000460264 FAM43BQ6ZT52 329 aaPredicted RBP21.29■■□□□ 1
COL5A1-203ENST00000460264 NPAS4Q8IUM7 802 aa21.29■■□□□ 1
COL5A1-203ENST00000460264 LRRC71Q8N4P6 559 aa21.29■■□□□ 1
COL5A1-203ENST00000460264 FIBCD1Q8N539 461 aa21.29■■□□□ 1
COL5A1-203ENST00000460264 ZNF689Q96CS4 500 aaPredicted RBP21.29■■□□□ 1
COL5A1-203ENST00000460264 ASB2Q96Q27 587 aa21.29■■□□□ 1
COL5A1-203ENST00000460264 MAP7D2Q96T17 732 aa21.29■■□□□ 1
COL5A1-203ENST00000460264 SEPT9Q9UHD8 586 aaPredicted RBP21.29■■□□□ 1
COL5A1-203ENST00000460264 LIMCH1Q9UPQ0 1083 aa21.29■■□□□ 1
COL5A1-203ENST00000460264 AKT3Q9Y243 479 aa21.29■■□□□ 1
COL5A1-203ENST00000460264 SPTBN5Q9NRC6 3674 aaKnown RBP21.29■■□□□ 1
COL5A1-203ENST00000460264 ARID2Q68CP9 1835 aa21.29■■□□□ 1
COL5A1-203ENST00000460264 TMEM150BA6NC51 233 aa21.28■■□□□ 1
COL5A1-203ENST00000460264 EML1O00423 815 aa21.28■■□□□ 1
COL5A1-203ENST00000460264 TBX3O15119 743 aa21.28■■□□□ 1
COL5A1-203ENST00000460264 MGEA5O60502 916 aa21.28■■□□□ 1
COL5A1-203ENST00000460264 MMP1P03956 469 aa21.28■■□□□ 1
COL5A1-203ENST00000460264 TMOD1P28289 359 aa21.28■■□□□ 1
COL5A1-203ENST00000460264 FOSBP53539 338 aa21.28■■□□□ 1
COL5A1-203ENST00000460264 MRPS5P82675 430 aaKnown RBP21.28■■□□□ 1
COL5A1-203ENST00000460264 TBC1D8BQ0IIM8 1120 aa21.28■■□□□ 1
COL5A1-203ENST00000460264 XKR3Q5GH77 459 aa21.28■■□□□ 1
COL5A1-203ENST00000460264 FAM228AQ86W67 206 aa21.28■■□□□ 1
COL5A1-203ENST00000460264 POTEDQ86YR6 584 aa21.28■■□□□ 1
COL5A1-203ENST00000460264 BANK1Q8NDB2 785 aa21.28■■□□□ 1
COL5A1-203ENST00000460264 SYMPKQ92797 1274 aaKnown RBP21.28■■□□□ 1
COL5A1-203ENST00000460264 HAS1Q92839 578 aa21.28■■□□□ 1
COL5A1-203ENST00000460264 KIF2CQ99661 725 aa21.28■■□□□ 1
COL5A1-203ENST00000460264 NIFKQ9BYG3 293 aaKnown RBP21.28■■□□□ 1
COL5A1-203ENST00000460264 ST3GAL5Q9UNP4 418 aa21.28■■□□□ 1
COL5A1-203ENST00000460264 FNDC1Q4ZHG4 1894 aaPredicted RBP21.28■■□□□ 1
COL5A1-203ENST00000460264 GPR182O15218 404 aa21.27■■□□□ 1
COL5A1-203ENST00000460264 NLRP11P59045 1033 aaKnown RBP21.27■■□□□ 1
COL5A1-203ENST00000460264 TFF2Q03403 129 aa21.27■■□□□ 1
COL5A1-203ENST00000460264 BTG3Q14201 252 aaPredicted RBP21.27■■□□□ 1
COL5A1-203ENST00000460264 MTERF2Q49AM1 385 aa21.27■■□□□ 1
COL5A1-203ENST00000460264 ODR4Q5SWX8 454 aa21.27■■□□□ 1
COL5A1-203ENST00000460264 CEP89Q96ST8 783 aa21.27■■□□□ 1
COL5A1-203ENST00000460264 ADAMTS10Q9H324 1103 aa21.27■■□□□ 1
COL5A1-203ENST00000460264 XIRP2A4UGR9 3374 aa21.26■□□□□ 0.99
COL5A1-203ENST00000460264 H3BNC9 293 aa21.26■□□□□ 0.99
COL5A1-203ENST00000460264 STAG3L1P0CL83 205 aa21.26■□□□□ 0.99
COL5A1-203ENST00000460264 CTNNB1P35222 781 aa21.26■□□□□ 0.99
COL5A1-203ENST00000460264 SARSP49591 514 aaKnown RBP21.26■□□□□ 0.99
COL5A1-203ENST00000460264 PSMC5P62195 406 aa21.26■□□□□ 0.99
COL5A1-203ENST00000460264 GPM6BQ13491 265 aa21.26■□□□□ 0.99
COL5A1-203ENST00000460264 TRIM29Q14134 588 aa21.26■□□□□ 0.99
COL5A1-203ENST00000460264 DIS3L2Q8IYB7 885 aaKnown RBP21.26■□□□□ 0.99
COL5A1-203ENST00000460264 ZNF710Q8N1W2 664 aa21.26■□□□□ 0.99
COL5A1-203ENST00000460264 CLP1Q92989 425 aaKnown RBP21.26■□□□□ 0.99
COL5A1-203ENST00000460264 MRPL38Q96DV4 380 aaKnown RBP21.26■□□□□ 0.99
COL5A1-203ENST00000460264 DENND3A2RUS2 1198 aa21.25■□□□□ 0.99
COL5A1-203ENST00000460264 BTBD18B2RXH4 712 aa21.25■□□□□ 0.99
COL5A1-203ENST00000460264 C5orf67F2Z3F1 127 aa21.25■□□□□ 0.99
COL5A1-203ENST00000460264 ANO5Q75V66 913 aa21.25■□□□□ 0.99
COL5A1-203ENST00000460264 CCDC83Q8IWF9 413 aa21.25■□□□□ 0.99
COL5A1-203ENST00000460264 CMTR2Q8IYT2 770 aaKnown RBP21.25■□□□□ 0.99
COL5A1-203ENST00000460264 ADAM2Q99965 735 aa21.25■□□□□ 0.99
COL5A1-203ENST00000460264 SH2D3AQ9BRG2 576 aa21.25■□□□□ 0.99
COL5A1-203ENST00000460264 RGS18Q9NS28 235 aa21.25■□□□□ 0.99
COL5A1-203ENST00000460264 C1orf112Q9NSG2 853 aa21.25■□□□□ 0.99
COL5A1-203ENST00000460264 RWDD3Q9Y3V2 267 aa21.25■□□□□ 0.99
COL5A1-203ENST00000460264 TCF20Q9UGU0 1960 aaKnown RBP21.25■□□□□ 0.99
COL5A1-203ENST00000460264 DDX11L8A8MPP1 907 aa21.24■□□□□ 0.99
COL5A1-203ENST00000460264 BMPR1AP36894 532 aa21.24■□□□□ 0.99
COL5A1-203ENST00000460264 QARSP47897 775 aaKnown RBP21.24■□□□□ 0.99
COL5A1-203ENST00000460264 GPC3P51654 580 aa21.24■□□□□ 0.99
COL5A1-203ENST00000460264 SPIRE1Q08AE8 756 aa21.24■□□□□ 0.99
COL5A1-203ENST00000460264 DRP2Q13474 957 aa21.24■□□□□ 0.99
COL5A1-203ENST00000460264 PTPROQ16827 1216 aa21.24■□□□□ 0.99
COL5A1-203ENST00000460264 SLC24A5Q71RS6 500 aa21.24■□□□□ 0.99
COL5A1-203ENST00000460264 SLFN12Q8IYM2 578 aa21.24■□□□□ 0.99
COL5A1-203ENST00000460264 ZNF668Q96K58 619 aaPredicted RBP21.24■□□□□ 0.99
COL5A1-203ENST00000460264 LRFN2Q9ULH4 789 aa21.24■□□□□ 0.99
COL5A1-203ENST00000460264 COG5Q9UP83 839 aa21.24■□□□□ 0.99
COL5A1-203ENST00000460264 IGKV6-21A0A0C4DH24 114 aa21.23■□□□□ 0.99
COL5A1-203ENST00000460264 C9IYK1 514 aa21.23■□□□□ 0.99
COL5A1-203ENST00000460264 WNT7AO00755 349 aa21.23■□□□□ 0.99
COL5A1-203ENST00000460264 MARCH6O60337 910 aa21.23■□□□□ 0.99
COL5A1-203ENST00000460264 RB1P06400 928 aa21.23■□□□□ 0.99
COL5A1-203ENST00000460264 EIF4BP23588 611 aaKnown RBP21.23■□□□□ 0.99
COL5A1-203ENST00000460264 GATMP50440 423 aa21.23■□□□□ 0.99
COL5A1-203ENST00000460264 DSC3Q14574 896 aa21.23■□□□□ 0.99
COL5A1-203ENST00000460264 AAK1Q2M2I8 961 aa21.23■□□□□ 0.99
COL5A1-203ENST00000460264 PLA2G4FQ68DD2 849 aa21.23■□□□□ 0.99
COL5A1-203ENST00000460264 HLA-CQ95604 372 aa21.23■□□□□ 0.99
COL5A1-203ENST00000460264 LLPHQ9BRT6 129 aaKnown RBP21.23■□□□□ 0.99
COL5A1-203ENST00000460264 C11orf84Q9BUA3 381 aaPredicted RBP21.23■□□□□ 0.99
COL5A1-203ENST00000460264 WRAP73Q9P2S5 460 aaPredicted RBP21.23■□□□□ 0.99
COL5A1-203ENST00000460264 MRPL42Q9Y6G3 142 aaKnown RBP21.23■□□□□ 0.99
COL5A1-203ENST00000460264 NCOR1O75376 2440 aa21.23■□□□□ 0.99
COL5A1-203ENST00000460264 BAG4O95429 457 aaKnown RBP21.22■□□□□ 0.99
COL5A1-203ENST00000460264 P4HBP07237 508 aaKnown RBP21.22■□□□□ 0.99
COL5A1-203ENST00000460264 DARSP14868 501 aaKnown RBP21.22■□□□□ 0.99
COL5A1-203ENST00000460264 IBSPP21815 317 aaPredicted RBP21.22■□□□□ 0.99
COL5A1-203ENST00000460264 RBM25P49756 843 aaKnown RBP21.22■□□□□ 0.99
COL5A1-203ENST00000460264 PAN2Q504Q3 1202 aaKnown RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms