RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 DDHD2O94830 711 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 OR5F1O95221 314 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 GLI1P08151 1106 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 C6orf222P0C671 652 aaPredicted RBP5.39□□□□□ -1.55
EPHA3-202ENST00000452448 S100A1P23297 94 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 ARHGDIBP52566 201 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 BPIFB4P59827 614 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 TUBA4AP68366 448 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 ACY1Q03154 408 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 NFE2L1Q14494 772 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 HABP4Q5JVS0 413 aaKnown RBP5.39□□□□□ -1.55
EPHA3-202ENST00000452448 RBM20Q5T481 1227 aaKnown RBP5.39□□□□□ -1.55
EPHA3-202ENST00000452448 C6orf118Q5T5N4 469 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 RSRC2Q7L4I2 434 aaKnown RBP5.39□□□□□ -1.55
EPHA3-202ENST00000452448 ZNF598Q86UK7 904 aaKnown RBP5.39□□□□□ -1.55
EPHA3-202ENST00000452448 FNIP1Q8TF40 1166 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 RTFDC1Q9BY42 306 aaPredicted RBP5.39□□□□□ -1.55
EPHA3-202ENST00000452448 KRTAP3-3Q9BYR6 98 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 KRTAP3-2Q9BYR7 98 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 NDEL1Q9GZM8 345 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 MMRN2Q9H8L6 949 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 VPS37BQ9H9H4 285 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 SCPEP1Q9HB40 452 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 ZFYVE28Q9HCC9 887 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 INIPQ9NRY2 104 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 SUCLA2Q9P2R7 463 aaPredicted RBP5.39□□□□□ -1.55
EPHA3-202ENST00000452448 PCDHB2Q9Y5E7 798 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 V9GY48 417 aaPredicted RBP5.39□□□□□ -1.55
EPHA3-202ENST00000452448 ERBINQ96RT1 1412 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 E2F3O00716 465 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 FYB1O15117 783 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 ZBTB24O43167 697 aaPredicted RBP5.39□□□□□ -1.55
EPHA3-202ENST00000452448 SMIM24O75264 130 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 ADCY5O95622 1261 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 IGHA2P01877 340 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 APOEP02649 317 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 RHOXF2BP0C7M4 288 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 TMEM11P17152 192 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 PSMA4P25789 261 aaKnown RBP5.39□□□□□ -1.55
EPHA3-202ENST00000452448 GALNSP34059 522 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 PLCD1P51178 756 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 RENBPP51606 427 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 GSTO1P78417 241 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 LSM11P83369 360 aaKnown RBP eCLIP5.39□□□□□ -1.55
EPHA3-202ENST00000452448 STIM1Q13586 685 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 SSPNQ14714 243 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 STK38Q15208 465 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 GPATCH4Q5T3I0 446 aaKnown RBP5.39□□□□□ -1.55
EPHA3-202ENST00000452448 KDELC1Q6UW63 502 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 LRSAM1Q6UWE0 723 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 SCUBE3Q8IX30 993 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 ARRDC4Q8NCT1 418 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 OR6C4Q8NGE1 309 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 NKX2-3Q8TAU0 364 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 ZNF516Q92618 1163 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 RHOXF2Q9BQY4 288 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 ERP44Q9BS26 406 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 PUS3Q9BZE2 481 aaKnown RBP5.39□□□□□ -1.55
EPHA3-202ENST00000452448 ASPSCR1Q9BZE9 553 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 FAM129AQ9BZQ8 928 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 UBXN6Q9BZV1 441 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 CCDC87Q9NVE4 849 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 GIMAP2Q9UG22 337 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 DDX20Q9UHI6 824 aaKnown RBP5.39□□□□□ -1.55
EPHA3-202ENST00000452448 ADAM21Q9UKJ8 722 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 DDX19BQ9UMR2 479 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 ZNF148Q9UQR1 794 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 ZBTB1Q9Y2K1 713 aa5.39□□□□□ -1.55
EPHA3-202ENST00000452448 ZNF142P52746 1687 aaPredicted RBP5.38□□□□□ -1.55
EPHA3-202ENST00000452448 CCDC171Q6TFL3 1326 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 CETN3O15182 167 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 HRO43593 1189 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 STX6O43752 255 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 ZBTB14O43829 449 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 CYP2E1P05181 493 aaPredicted RBP5.38□□□□□ -1.55
EPHA3-202ENST00000452448 TOP1P11387 765 aaKnown RBP5.38□□□□□ -1.55
EPHA3-202ENST00000452448 MPSTP25325 297 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 PRKAR1BP31321 381 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 IDUAP35475 653 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 MRPS5P82675 430 aaKnown RBP5.38□□□□□ -1.55
EPHA3-202ENST00000452448 KDSRQ06136 332 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 NIPAL4Q0D2K0 466 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 MLC1Q15049 377 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 SETMARQ53H47 684 aaPredicted RBP5.38□□□□□ -1.55
EPHA3-202ENST00000452448 FAM26DQ5JW98 314 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 SLC27A3Q5K4L6 730 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 CEP85LQ5SZL2 805 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 ZNF772Q68DY9 489 aaPredicted RBP5.38□□□□□ -1.55
EPHA3-202ENST00000452448 PDE12Q6L8Q7 609 aaKnown RBP5.38□□□□□ -1.55
EPHA3-202ENST00000452448 SHQ1Q6PI26 577 aaKnown RBP5.38□□□□□ -1.55
EPHA3-202ENST00000452448 ANGPTL8Q6UXH0 198 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 ZNF354CQ86Y25 554 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 TMEM57Q8N5G2 664 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 TRPM4Q8TD43 1214 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 PEX13Q92968 403 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 OPTNQ96CV9 577 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 CNDP2Q96KP4 475 aaKnown RBP5.38□□□□□ -1.55
EPHA3-202ENST00000452448 FAM167AQ96KS9 214 aa5.38□□□□□ -1.55
EPHA3-202ENST00000452448 API5Q9BZZ5 524 aaKnown RBP5.38□□□□□ -1.55
EPHA3-202ENST00000452448 KIAA1683Q9H0B3 1180 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms