RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 MCM2P49736 904 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 GUCY2FP51841 1108 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 CDR1P51861 262 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 EPHB1P54762 984 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 ACTN3Q08043 901 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 IFFO1Q0D2I5 559 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 DCTN1Q14203 1278 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 TTF1Q15361 905 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 SGSM1Q2NKQ1 1148 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 USH1GQ495M9 461 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 CEP85LQ5SZL2 805 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 WDR78Q5VTH9 848 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 ARMC3Q5W041 872 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 E4F1Q66K89 784 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 CAPRIN2Q6IMN6 1127 aaKnown RBP4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 TRIM65Q6PJ69 517 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 C6orf89Q6UWU4 347 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCDC73Q6ZRK6 1079 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 TXNRD3Q86VQ6 643 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCDC144CPQ8IYA2 1237 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 FMR1NBQ8N0W7 255 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 AHI1Q8N157 1196 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 PPM1KQ8N3J5 372 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 CNNM3Q8NE01 707 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 BVESQ8NE79 360 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 SLC7A14Q8TBB6 771 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 CYB5D2Q8WUJ1 264 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 RSPH1Q8WYR4 309 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 NCSTNQ92542 709 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 TSR2Q969E8 191 aaKnown RBP4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 RELTQ969Z4 430 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCDC47Q96A33 483 aaKnown RBP4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 MRGPRX3Q96LB0 322 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 FGD4Q96M96 766 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 SCLT1Q96NL6 688 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 SH3GL2Q99962 352 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 DPH2Q9BQC3 489 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 BPIFA3Q9BQP9 254 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 LGR4Q9BXB1 951 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 PCDH18Q9HCL0 1135 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 DDX21Q9NR30 783 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 PICK1Q9NRD5 415 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 TUBA8Q9NY65 449 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 ZNF451Q9Y4E5 1061 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 GRIN2BQ13224 1484 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 WDR7Q9Y4E6 1490 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 CROCC2H7BZ55 1655 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 IQGAP1P46940 1657 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 RGS12O14924 1447 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 NOS1P29475 1434 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 NUP160Q12769 1436 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 C9orf84Q5VXU9 1444 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 EIF2AK4Q9P2K8 1649 aaKnown RBP4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 NSD2O96028 1365 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 PIK3R4Q99570 1358 aa4.02□□□□□ -1.77
HMGB3P8-201ENST00000449709 KIAA0586Q9BVV6 1533 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 CDHR2Q9BYE9 1310 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 SYNJ2O15056 1496 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 KRTAP4-8A0A0G2JLE6 195 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 MEGF11A6BM72 1044 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 GOLGA8AA7E2F4 631 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 HMGB1P1B2RPK0 211 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 M0R2C6 588 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 EBAG9O00559 213 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 WDR46O15213 610 aaKnown RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 SHOXO15266 292 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 TBX1O43435 398 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 TSPAN6O43657 245 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 PEX14O75381 377 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 DEAF1O75398 565 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 KATNA1O75449 491 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 BCAR3O75815 825 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 CST3P01034 146 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 MMEP08473 750 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 VIMP08670 466 aaKnown RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCDC159P0C7I6 412 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCDC166P0CW27 439 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 ALADP13716 330 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 EZRP15311 586 aaKnown RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 CD247P20963 164 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 GSDMDP57764 484 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 SULT2A1Q06520 285 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 MCL1Q07820 350 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 NSUN2Q08J23 767 aaKnown RBP eCLIP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 DYNC1I2Q13409 638 aaKnown RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 XRCC4Q13426 336 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 CUL3Q13618 768 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 MVPQ14764 893 aaKnown RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 PCBP1Q15365 356 aaKnown RBP eCLIP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 Q4G0T1 1027 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 LRRC23Q53EV4 343 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 LACTB2Q53H82 288 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 SPDYCQ5MJ68 293 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 AKNAD1Q5T1N1 836 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 ARTNQ5T4W7 220 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 GORABQ5T7V8 394 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 THEMIS2Q5TEJ8 643 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 PRAMEF13Q5VWM6 474 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 DCAF15Q66K64 600 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 CREB3L3Q68CJ9 461 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms