RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 USP17L2Q6R6M4 530 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 MARCH10Q8NA82 808 aaPredicted RBP15.12■□□□□ 0.01
VPS52-212ENST00000445902 NSUN4Q96CB9 384 aaKnown RBP15.12■□□□□ 0.01
VPS52-212ENST00000445902 C6orf50Q9HD87 102 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 TMOD4Q9NZQ9 345 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 SUCLA2Q9P2R7 463 aaPredicted RBP15.12■□□□□ 0.01
VPS52-212ENST00000445902 CORO1CQ9ULV4 474 aaPredicted RBP15.12■□□□□ 0.01
VPS52-212ENST00000445902 RREB1Q92766 1687 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 FLOT1O75955 427 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 PDHA1P08559 390 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 NUDT17P0C025 328 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 PDE6CP51160 858 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 ADCY2Q08462 1091 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 BLMHQ13867 455 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 TMEM266Q2M3C6 531 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 DUPD1Q68J44 220 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 ZDHHC24Q6UX98 284 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 JAMLQ86YT9 394 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 ZNF34Q8IZ26 560 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 FITM2Q8N6M3 262 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 DNAJC19Q96DA6 116 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 HDAC9Q9UKV0 1011 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 TOGARAM1Q9Y4F4 1720 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 NHSL1Q5SYE7 1610 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 BTNL10A8MVZ5 291 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 LACTBP83111 547 aaPredicted RBP15.12■□□□□ 0.01
VPS52-212ENST00000445902 LONRF1Q17RB8 773 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 HERC4Q5GLZ8 1057 aaPredicted RBP15.12■□□□□ 0.01
VPS52-212ENST00000445902 GALNT17Q6IS24 598 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 REXO1Q8N1G1 1221 aaKnown RBP15.12■□□□□ 0.01
VPS52-212ENST00000445902 HES6Q96HZ4 224 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 RMDN2Q96LZ7 410 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 PLCD4Q9BRC7 762 aa15.12■□□□□ 0.01
VPS52-212ENST00000445902 NKX1-2Q9UD57 310 aaPredicted RBP15.12■□□□□ 0.01
VPS52-212ENST00000445902 ZMYND8Q9ULU4 1186 aaPredicted RBP15.12■□□□□ 0.01
VPS52-212ENST00000445902 IGSF9BQ9UPX0 1349 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 E9PMD0 336 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 MAP3K13O43283 966 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 GFPT2O94808 682 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 GALCP54803 685 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 PTENP60484 403 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 ATP11AP98196 1134 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 KIAA1755Q5JYT7 1200 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 BARGINQ6ZT62 677 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 CNKSR1Q969H4 720 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 PIGSQ96S52 555 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 TMEM47Q9BQJ4 181 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 UBA5Q9GZZ9 404 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 LAMB1P07942 1786 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 DDX3XO00571 662 aaKnown RBP eCLIP15.11■□□□□ 0.019e-9■□□□□ 9.1
VPS52-212ENST00000445902 PLCG2P16885 1265 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 NR2F2P24468 414 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 CTCFP49711 727 aaPredicted RBP15.11■□□□□ 0.01
VPS52-212ENST00000445902 GNAQP50148 359 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 BNIP1Q12981 228 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 KSR1Q8IVT5 923 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 KCNK9Q9NPC2 374 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 ZFATQ9P243 1243 aa15.11■□□□□ 0.01
VPS52-212ENST00000445902 RASGRF2O14827 1237 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 SUN1O94901 812 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 ADAMTS2O95450 1211 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 AGTP01019 485 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 GH1P01241 217 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 RPL21P46778 160 aaKnown RBP15.1■□□□□ 0.01
VPS52-212ENST00000445902 ICA1Q05084 483 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 LLGL1Q15334 1064 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 CAVIN4Q5BKX8 364 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 C10orf76Q5T2E6 689 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 SPTY2D1Q68D10 685 aaPredicted RBP15.1■□□□□ 0.01
VPS52-212ENST00000445902 ARHGAP27Q6ZUM4 889 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 SLFN11Q7Z7L1 901 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 DGKHQ86XP1 1220 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 SLC35G2Q8TBE7 412 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 NAF1Q96HR8 494 aaKnown RBP15.1■□□□□ 0.01
VPS52-212ENST00000445902 MTMR9Q96QG7 549 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 TFCP2L1Q9NZI6 479 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 ARPP21Q9UBL0 812 aaPredicted RBP15.1■□□□□ 0.01
VPS52-212ENST00000445902 PTPN22Q9Y2R2 807 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 ZNF804BA4D1E1 1349 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 DPPA5A6NC42 116 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 KIAA0391O15091 583 aaKnown RBP15.1■□□□□ 0.01
VPS52-212ENST00000445902 ATP4AP20648 1035 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 PON1P27169 355 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 TUBP50607 506 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 PSMD2Q13200 908 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 AUHQ13825 339 aaKnown RBP15.1■□□□□ 0.01
VPS52-212ENST00000445902 EXOC3L4Q17RC7 722 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 GALNTL6Q49A17 601 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 C6orf118Q5T5N4 469 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 EXOC3L1Q86VI1 746 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 GLYCTKQ8IVS8 523 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 SCFD1Q8WVM8 642 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 SEPT11Q9NVA2 429 aaKnown RBP15.1■□□□□ 0.01
VPS52-212ENST00000445902 ETAA1Q9NY74 926 aa15.1■□□□□ 0.01
VPS52-212ENST00000445902 KLHL33A6NCF5 533 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 MARCH6O60337 910 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 SNUPNO95149 360 aaKnown RBP15.09■□□□□ 0.01
VPS52-212ENST00000445902 OAS1P00973 400 aaKnown RBP15.09■□□□□ 0.01
VPS52-212ENST00000445902 GNA11P29992 359 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 SLMAPQ14BN4 828 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms