RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 MTERF2Q49AM1 385 aa19.76■□□□□ 0.75
NUP50-208ENST00000430547 EPC2Q52LR7 807 aa19.76■□□□□ 0.75
NUP50-208ENST00000430547 TJAP1Q5JTD0 557 aa19.76■□□□□ 0.75
NUP50-208ENST00000430547 B3GNT9Q6UX72 402 aa19.76■□□□□ 0.75
NUP50-208ENST00000430547 POTEDQ86YR6 584 aa19.76■□□□□ 0.75
NUP50-208ENST00000430547 NPAS4Q8IUM7 802 aa19.76■□□□□ 0.75
NUP50-208ENST00000430547 DIS3L2Q8IYB7 885 aaKnown RBP19.76■□□□□ 0.75
NUP50-208ENST00000430547 SLFN12Q8IYM2 578 aa19.76■□□□□ 0.75
NUP50-208ENST00000430547 ZNF710Q8N1W2 664 aa19.76■□□□□ 0.75
NUP50-208ENST00000430547 BANK1Q8NDB2 785 aa19.76■□□□□ 0.75
NUP50-208ENST00000430547 IL27Q8NEV9 243 aa19.76■□□□□ 0.75
NUP50-208ENST00000430547 LINC01599Q8WXQ3 324 aa19.76■□□□□ 0.75
NUP50-208ENST00000430547 ZSCAN31Q96LW9 406 aaPredicted RBP19.76■□□□□ 0.75
NUP50-208ENST00000430547 COL25A1Q9BXS0 654 aaPredicted RBP19.76■□□□□ 0.75
NUP50-208ENST00000430547 CDHR5Q9HBB8 845 aa19.76■□□□□ 0.75
NUP50-208ENST00000430547 RNF216Q9NWF9 866 aaPredicted RBP19.76■□□□□ 0.75
NUP50-208ENST00000430547 RWDD3Q9Y3V2 267 aa19.76■□□□□ 0.75
NUP50-208ENST00000430547 KIAA1671Q9BY89 1806 aa19.75■□□□□ 0.75
NUP50-208ENST00000430547 FAM205CA6NFA0 338 aa19.75■□□□□ 0.75
NUP50-208ENST00000430547 NLRP11P59045 1033 aaKnown RBP19.75■□□□□ 0.75
NUP50-208ENST00000430547 PSMC5P62195 406 aa19.75■□□□□ 0.75
NUP50-208ENST00000430547 BTG3Q14201 252 aaPredicted RBP19.75■□□□□ 0.75
NUP50-208ENST00000430547 EARS2Q5JPH6 523 aaKnown RBP19.75■□□□□ 0.75
NUP50-208ENST00000430547 TMEM192Q8IY95 271 aa19.75■□□□□ 0.75
NUP50-208ENST00000430547 TMEM40Q8WWA1 233 aa19.75■□□□□ 0.75
NUP50-208ENST00000430547 LLPHQ9BRT6 129 aaKnown RBP19.75■□□□□ 0.75
NUP50-208ENST00000430547 UPF2Q9HAU5 1272 aaKnown RBP19.75■□□□□ 0.75
NUP50-208ENST00000430547 ERVK-5Q9HDB9 667 aa19.75■□□□□ 0.75
NUP50-208ENST00000430547 VAV3Q9UKW4 847 aa19.75■□□□□ 0.75
NUP50-208ENST00000430547 ST3GAL5Q9UNP4 418 aa19.75■□□□□ 0.75
NUP50-208ENST00000430547 CUL9Q8IWT3 2517 aa19.74■□□□□ 0.75
NUP50-208ENST00000430547 DDX11L8A8MPP1 907 aa19.74■□□□□ 0.75
NUP50-208ENST00000430547 BTBD18B2RXH4 712 aa19.74■□□□□ 0.75
NUP50-208ENST00000430547 GPR32O75388 356 aa19.74■□□□□ 0.75
NUP50-208ENST00000430547 CTNNB1P35222 781 aa19.74■□□□□ 0.75
NUP50-208ENST00000430547 QARSP47897 775 aaKnown RBP19.74■□□□□ 0.75
NUP50-208ENST00000430547 DNM2P50570 870 aa19.74■□□□□ 0.75
NUP50-208ENST00000430547 MRPS5P82675 430 aaKnown RBP19.74■□□□□ 0.75
NUP50-208ENST00000430547 PTPROQ16827 1216 aa19.74■□□□□ 0.75
NUP50-208ENST00000430547 RTN4RL1Q86UN2 441 aaPredicted RBP19.74■□□□□ 0.75
NUP50-208ENST00000430547 TNFRSF25Q93038 417 aa19.74■□□□□ 0.75
NUP50-208ENST00000430547 NIFKQ9BYG3 293 aaKnown RBP19.74■□□□□ 0.75
NUP50-208ENST00000430547 TMX1Q9H3N1 280 aa19.74■□□□□ 0.75
NUP50-208ENST00000430547 SH2B1Q9NRF2 756 aaPredicted RBP19.74■□□□□ 0.75
NUP50-208ENST00000430547 ARID2Q68CP9 1835 aa19.74■□□□□ 0.75
NUP50-208ENST00000430547 EML1O00423 815 aa19.73■□□□□ 0.75
NUP50-208ENST00000430547 DGKIO75912 1065 aa19.73■□□□□ 0.75
NUP50-208ENST00000430547 ST3GAL1Q11201 340 aa19.73■□□□□ 0.75
NUP50-208ENST00000430547 GPM6BQ13491 265 aa19.73■□□□□ 0.75
NUP50-208ENST00000430547 AAK1Q2M2I8 961 aa19.73■□□□□ 0.75
NUP50-208ENST00000430547 NCAPH2Q6IBW4 605 aa19.73■□□□□ 0.75
NUP50-208ENST00000430547 LINC01465Q8N7H1 131 aa19.73■□□□□ 0.75
NUP50-208ENST00000430547 NLRP7Q8WX94 980 aa19.73■□□□□ 0.75
NUP50-208ENST00000430547 HAS1Q92839 578 aa19.73■□□□□ 0.75
NUP50-208ENST00000430547 C8orf76Q96K31 380 aa19.73■□□□□ 0.75
NUP50-208ENST00000430547 ADAM2Q99965 735 aa19.73■□□□□ 0.75
NUP50-208ENST00000430547 JPH2Q9BR39 696 aaPredicted RBP19.73■□□□□ 0.75
NUP50-208ENST00000430547 C1orf112Q9NSG2 853 aa19.73■□□□□ 0.75
NUP50-208ENST00000430547 PCDHB7Q9Y5E2 793 aa19.73■□□□□ 0.75
NUP50-208ENST00000430547 FNDC1Q4ZHG4 1894 aaPredicted RBP19.73■□□□□ 0.75
NUP50-208ENST00000430547 TMEM150BA6NC51 233 aa19.72■□□□□ 0.75
NUP50-208ENST00000430547 H3BNC9 293 aa19.72■□□□□ 0.75
NUP50-208ENST00000430547 P4HBP07237 508 aaKnown RBP19.72■□□□□ 0.75
NUP50-208ENST00000430547 SARSP49591 514 aaKnown RBP19.72■□□□□ 0.75
NUP50-208ENST00000430547 HMGN5P82970 282 aaKnown RBP19.72■□□□□ 0.75
NUP50-208ENST00000430547 GUCY1B3Q02153 619 aa19.72■□□□□ 0.75
NUP50-208ENST00000430547 TARBP2Q15633 366 aaKnown RBP19.72■□□□□ 0.75
NUP50-208ENST00000430547 CALCRLQ16602 461 aa19.72■□□□□ 0.75
NUP50-208ENST00000430547 FAM228AQ86W67 206 aa19.72■□□□□ 0.75
NUP50-208ENST00000430547 FAM184AQ8NB25 1140 aa19.72■□□□□ 0.75
NUP50-208ENST00000430547 ZNF689Q96CS4 500 aaPredicted RBP19.72■□□□□ 0.75
NUP50-208ENST00000430547 ASB2Q96Q27 587 aa19.72■□□□□ 0.75
NUP50-208ENST00000430547 SH2D3AQ9BRG2 576 aa19.72■□□□□ 0.75
NUP50-208ENST00000430547 RC3H2Q9HBD1 1191 aaKnown RBP19.72■□□□□ 0.75
NUP50-208ENST00000430547 COG5Q9UP83 839 aa19.72■□□□□ 0.75
NUP50-208ENST00000430547 NEMFO60524 1076 aa19.71■□□□□ 0.75
NUP50-208ENST00000430547 EIF4BP23588 611 aaKnown RBP19.71■□□□□ 0.75
NUP50-208ENST00000430547 RBM25P49756 843 aaKnown RBP19.71■□□□□ 0.75
NUP50-208ENST00000430547 GPC3P51654 580 aa19.71■□□□□ 0.75
NUP50-208ENST00000430547 CDC42EP1Q00587 391 aa19.71■□□□□ 0.75
NUP50-208ENST00000430547 GNL2Q13823 731 aaKnown RBP19.71■□□□□ 0.75
NUP50-208ENST00000430547 EPHA7Q15375 998 aa19.71■□□□□ 0.75
NUP50-208ENST00000430547 PAN2Q504Q3 1202 aaKnown RBP19.71■□□□□ 0.75
NUP50-208ENST00000430547 PLA2G4FQ68DD2 849 aa19.71■□□□□ 0.75
NUP50-208ENST00000430547 SLC24A5Q71RS6 500 aa19.71■□□□□ 0.75
NUP50-208ENST00000430547 CMTR2Q8IYT2 770 aaKnown RBP19.71■□□□□ 0.75
NUP50-208ENST00000430547 ZNF668Q96K58 619 aaPredicted RBP19.71■□□□□ 0.75
NUP50-208ENST00000430547 KIF2CQ99661 725 aa19.71■□□□□ 0.75
NUP50-208ENST00000430547 LXNQ9BS40 222 aa19.71■□□□□ 0.75
NUP50-208ENST00000430547 C11orf84Q9BUA3 381 aaPredicted RBP19.71■□□□□ 0.75
NUP50-208ENST00000430547 RGS18Q9NS28 235 aa19.71■□□□□ 0.75
NUP50-208ENST00000430547 ST18O60284 1047 aa19.7■□□□□ 0.74
NUP50-208ENST00000430547 MGEA5O60502 916 aa19.7■□□□□ 0.74
NUP50-208ENST00000430547 RB1P06400 928 aa19.7■□□□□ 0.74
NUP50-208ENST00000430547 ZSCAN20P17040 1043 aaPredicted RBP19.7■□□□□ 0.74
NUP50-208ENST00000430547 BMPR1AP36894 532 aa19.7■□□□□ 0.74
NUP50-208ENST00000430547 RABEP1Q15276 862 aa19.7■□□□□ 0.74
NUP50-208ENST00000430547 TIGD5Q53EQ6 642 aa19.7■□□□□ 0.74
NUP50-208ENST00000430547 ANO5Q75V66 913 aa19.7■□□□□ 0.74
NUP50-208ENST00000430547 EXOC8Q8IYI6 725 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms