RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 SMC1BQ8NDV3 1235 aa24.35■■□□□ 1.49
VSX1-205ENST00000429762 GPR20Q99678 358 aa24.35■■□□□ 1.49
VSX1-205ENST00000429762 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.35■■□□□ 1.49
VSX1-205ENST00000429762 FGFR1OPO95684 399 aaKnown RBP24.34■■□□□ 1.49
VSX1-205ENST00000429762 PLS3P13797 630 aa24.34■■□□□ 1.49
VSX1-205ENST00000429762 PEX3P56589 373 aa24.34■■□□□ 1.49
VSX1-205ENST00000429762 CCDC40Q4G0X9 1142 aa24.34■■□□□ 1.49
VSX1-205ENST00000429762 XKR3Q5GH77 459 aa24.34■■□□□ 1.49
VSX1-205ENST00000429762 TAPT1Q6NXT6 567 aa24.34■■□□□ 1.49
VSX1-205ENST00000429762 SEPT1Q8WYJ6 367 aa24.34■■□□□ 1.49
VSX1-205ENST00000429762 SPATA33Q96N06 139 aa24.34■■□□□ 1.49
VSX1-205ENST00000429762 EIF3DO15371 548 aaKnown RBP eCLIP24.34■■□□□ 1.49
VSX1-205ENST00000429762 TGFB1I1O43294 461 aa24.34■■□□□ 1.49
VSX1-205ENST00000429762 NR2F2P24468 414 aa24.34■■□□□ 1.49
VSX1-205ENST00000429762 MARK3P27448 753 aa24.34■■□□□ 1.49
VSX1-205ENST00000429762 ADAM9Q13443 819 aa24.34■■□□□ 1.49
VSX1-205ENST00000429762 KCNV1Q6PIU1 500 aa24.34■■□□□ 1.49
VSX1-205ENST00000429762 BSNDQ8WZ55 320 aa24.34■■□□□ 1.49
VSX1-205ENST00000429762 MAML3Q96JK9 1138 aa24.34■■□□□ 1.49
VSX1-205ENST00000429762 KIFC3Q9BVG8 833 aa24.34■■□□□ 1.49
VSX1-205ENST00000429762 XPNPEP1Q9NQW7 623 aa24.34■■□□□ 1.49
VSX1-205ENST00000429762 TYW1Q9NV66 732 aaKnown RBP24.34■■□□□ 1.49
VSX1-205ENST00000429762 NOP56O00567 594 aaKnown RBP24.33■■□□□ 1.49
VSX1-205ENST00000429762 SLC16A4O15374 487 aa24.33■■□□□ 1.49
VSX1-205ENST00000429762 SNAI1O95863 264 aaPredicted RBP24.33■■□□□ 1.49
VSX1-205ENST00000429762 KLK7P49862 253 aa24.33■■□□□ 1.49
VSX1-205ENST00000429762 RBL2Q08999 1139 aa24.33■■□□□ 1.49
VSX1-205ENST00000429762 TTLL4Q14679 1199 aa24.33■■□□□ 1.49
VSX1-205ENST00000429762 FOXR2Q6PJQ5 311 aa24.33■■□□□ 1.49
VSX1-205ENST00000429762 SCFD2Q8WU76 684 aa24.33■■□□□ 1.49
VSX1-205ENST00000429762 DRC1Q96MC2 740 aa24.33■■□□□ 1.49
VSX1-205ENST00000429762 LARSQ9P2J5 1176 aaKnown RBP24.33■■□□□ 1.49
VSX1-205ENST00000429762 TRAF3IP3Q9Y228 551 aa24.33■■□□□ 1.49
VSX1-205ENST00000429762 DOCK3Q8IZD9 2030 aa24.33■■□□□ 1.49
VSX1-205ENST00000429762 CALUO43852 315 aaPredicted RBP24.33■■□□□ 1.48
VSX1-205ENST00000429762 SKILP12757 684 aa24.33■■□□□ 1.48
VSX1-205ENST00000429762 STAT5BP51692 787 aa24.33■■□□□ 1.48
VSX1-205ENST00000429762 LOC102724159A0A0B4J2E5 919 aa24.32■■□□□ 1.48
VSX1-205ENST00000429762 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.32■■□□□ 1.48
VSX1-205ENST00000429762 PDXKO00764 312 aa24.32■■□□□ 1.48
VSX1-205ENST00000429762 PPP1R37O75864 691 aa24.32■■□□□ 1.48
VSX1-205ENST00000429762 NR3C1P04150 777 aa24.32■■□□□ 1.48
VSX1-205ENST00000429762 ADCYAP1R1P41586 468 aa24.32■■□□□ 1.48
VSX1-205ENST00000429762 PWP2Q15269 919 aaKnown RBP24.32■■□□□ 1.48
VSX1-205ENST00000429762 EDRF1Q3B7T1 1238 aa24.32■■□□□ 1.48
VSX1-205ENST00000429762 CYP4F22Q6NT55 531 aa24.32■■□□□ 1.48
VSX1-205ENST00000429762 PPP4R3CPQ6ZMV5 832 aa24.32■■□□□ 1.48
VSX1-205ENST00000429762 ZC3H3Q8IXZ2 948 aaKnown RBP24.32■■□□□ 1.48
VSX1-205ENST00000429762 KIAA1524Q8TCG1 905 aa24.32■■□□□ 1.48
VSX1-205ENST00000429762 CEP63Q96MT8 703 aa24.32■■□□□ 1.48
VSX1-205ENST00000429762 KATNBL1Q9H079 304 aa24.32■■□□□ 1.48
VSX1-205ENST00000429762 SLC15A5A6NIM6 579 aa24.31■■□□□ 1.48
VSX1-205ENST00000429762 TMEM88BA6NKF7 163 aa24.31■■□□□ 1.48
VSX1-205ENST00000429762 TPM2P07951 284 aa24.31■■□□□ 1.48
VSX1-205ENST00000429762 FAM160B1Q5W0V3 765 aa24.31■■□□□ 1.48
VSX1-205ENST00000429762 TC2NQ8N9U0 490 aa24.31■■□□□ 1.48
VSX1-205ENST00000429762 TIPINQ9BVW5 301 aa24.31■■□□□ 1.48
VSX1-205ENST00000429762 STRA6Q9BX79 667 aa24.31■■□□□ 1.48
VSX1-205ENST00000429762 DIS3Q9Y2L1 958 aaKnown RBP24.31■■□□□ 1.48
VSX1-205ENST00000429762 CCDC169A6NNP5 214 aa24.31■■□□□ 1.48
VSX1-205ENST00000429762 CETN3O15182 167 aa24.31■■□□□ 1.48
VSX1-205ENST00000429762 CRHR2Q13324 411 aa24.31■■□□□ 1.48
VSX1-205ENST00000429762 VWA3BQ502W6 1294 aa24.31■■□□□ 1.48
VSX1-205ENST00000429762 C17orf99Q6UX52 265 aa24.31■■□□□ 1.48
VSX1-205ENST00000429762 MAMDC4Q6UXC1 1216 aa24.31■■□□□ 1.48
VSX1-205ENST00000429762 PPFIBP1Q86W92 1011 aa24.31■■□□□ 1.48
VSX1-205ENST00000429762 GLG1Q92896 1179 aa24.31■■□□□ 1.48
VSX1-205ENST00000429762 ATP6V0A4Q9HBG4 840 aa24.31■■□□□ 1.48
VSX1-205ENST00000429762 VTA1Q9NP79 307 aa24.31■■□□□ 1.48
VSX1-205ENST00000429762 PDLIM7Q9NR12 457 aa24.31■■□□□ 1.48
VSX1-205ENST00000429762 PCDHB13Q9Y5F0 798 aa24.31■■□□□ 1.48
VSX1-205ENST00000429762 TISP43B9A030 160 aa24.3■■□□□ 1.48
VSX1-205ENST00000429762 RNF225M0QZC1 329 aaPredicted RBP24.3■■□□□ 1.48
VSX1-205ENST00000429762 TLR2O60603 784 aa24.3■■□□□ 1.48
VSX1-205ENST00000429762 DGAT1O75907 488 aa24.3■■□□□ 1.48
VSX1-205ENST00000429762 GYPCP04921 128 aa24.3■■□□□ 1.48
VSX1-205ENST00000429762 CASP4P49662 377 aa24.3■■□□□ 1.48
VSX1-205ENST00000429762 ARHGAP1Q07960 439 aa24.3■■□□□ 1.48
VSX1-205ENST00000429762 TBC1D8BQ0IIM8 1120 aa24.3■■□□□ 1.48
VSX1-205ENST00000429762 EMC2Q15006 297 aa24.3■■□□□ 1.48
VSX1-205ENST00000429762 MAN2A1Q16706 1144 aa24.3■■□□□ 1.48
VSX1-205ENST00000429762 STXBP4Q6ZWJ1 553 aa24.3■■□□□ 1.48
VSX1-205ENST00000429762 ZNF467Q7Z7K2 595 aaPredicted RBP24.3■■□□□ 1.48
VSX1-205ENST00000429762 CCDC102AQ96A19 550 aa24.3■■□□□ 1.48
VSX1-205ENST00000429762 POLR3FQ9H1D9 316 aaPredicted RBP24.3■■□□□ 1.48
VSX1-205ENST00000429762 ZCCHC17Q9NP64 241 aaKnown RBP24.3■■□□□ 1.48
VSX1-205ENST00000429762 UBE4BO95155 1302 aa24.3■■□□□ 1.48
VSX1-205ENST00000429762 ITIH6Q6UXX5 1313 aa24.3■■□□□ 1.48
VSX1-205ENST00000429762 CASP14P31944 242 aa24.29■■□□□ 1.48
VSX1-205ENST00000429762 DNM2P50570 870 aa24.29■■□□□ 1.48
VSX1-205ENST00000429762 FXR1P51114 621 aaKnown RBP eCLIP24.29■■□□□ 1.48
VSX1-205ENST00000429762 POLGP54098 1239 aaPredicted RBP24.29■■□□□ 1.48
VSX1-205ENST00000429762 HAUS6Q7Z4H7 955 aa24.29■■□□□ 1.48
VSX1-205ENST00000429762 SYCP3Q8IZU3 236 aa24.29■■□□□ 1.48
VSX1-205ENST00000429762 CCDC155Q8N6L0 562 aa24.29■■□□□ 1.48
VSX1-205ENST00000429762 AFAP1L1Q8TED9 768 aa24.29■■□□□ 1.48
VSX1-205ENST00000429762 TMEM143Q96AN5 459 aa24.29■■□□□ 1.48
VSX1-205ENST00000429762 AZI2Q9H6S1 392 aa24.29■■□□□ 1.48
VSX1-205ENST00000429762 ZHX1Q9UKY1 873 aaPredicted RBP24.29■■□□□ 1.48
VSX1-205ENST00000429762 ZNF236Q9UL36 1845 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms