RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 NXPE3Q969Y0 559 aa7.34□□□□□ -1.23
SDCBP-203ENST00000424270 ADAM2Q99965 735 aa7.34□□□□□ -1.23
SDCBP-203ENST00000424270 ADAM33Q9BZ11 813 aa7.34□□□□□ -1.23
SDCBP-203ENST00000424270 C1orf112Q9NSG2 853 aa7.34□□□□□ -1.23
SDCBP-203ENST00000424270 MRPL11Q9Y3B7 192 aaKnown RBP7.34□□□□□ -1.23
SDCBP-203ENST00000424270 PCDHA1Q9Y5I3 950 aa7.34□□□□□ -1.23
SDCBP-203ENST00000424270 TAF4O00268 1085 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 GPAA1O43292 621 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 HOXA2O43364 376 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 LILRB5O75023 590 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 RPS6KA5O75582 802 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 KCNK5O95279 499 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 GOLGA8HP0CJ92 632 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 MYBP10242 640 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 MAGEA9P43362 315 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 NOVA1P51513 510 aaKnown RBP7.33□□□□□ -1.24
SDCBP-203ENST00000424270 SP2Q02086 613 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 GIT2Q14161 759 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 ODR4Q5SWX8 454 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 C19orf48Q6RUI8 117 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 SLC24A5Q71RS6 500 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 CEP68Q76N32 757 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 GET4Q7L5D6 327 aaPredicted RBP7.33□□□□□ -1.24
SDCBP-203ENST00000424270 IFNL3Q8IZI9 196 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 RHPN1Q8TCX5 695 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 BBXQ8WY36 941 aaPredicted RBP7.33□□□□□ -1.24
SDCBP-203ENST00000424270 PHKBQ93100 1093 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 EMILIN2Q9BXX0 1053 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 FAM126AQ9BYI3 521 aaPredicted RBP7.33□□□□□ -1.24
SDCBP-203ENST00000424270 CWH43Q9H720 699 aa7.33□□□□□ -1.24
SDCBP-203ENST00000424270 EPB41L4AQ9HCS5 686 aaPredicted RBP7.33□□□□□ -1.24
SDCBP-203ENST00000424270 CLUHO75153 1309 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 NT5C1B-RDH14C9J2C7 533 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 PATL2C9JE40 543 aaKnown RBP7.32□□□□□ -1.24
SDCBP-203ENST00000424270 SSBP05455 408 aaKnown RBP eCLIP7.32□□□□□ -1.24
SDCBP-203ENST00000424270 CT47B1P0C2W7 299 aaPredicted RBP7.32□□□□□ -1.24
SDCBP-203ENST00000424270 TRIM27P14373 513 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 CD72P21854 359 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 STARD6P59095 220 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 KRT76Q01546 638 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 CTDSPL2Q05D32 466 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 SLFN5Q08AF3 891 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 ZNF252P-AS1Q0IIN9 211 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 MLF2Q15773 248 aaPredicted RBP7.32□□□□□ -1.24
SDCBP-203ENST00000424270 METTL7BQ6UX53 244 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 ITPRIPQ8IWB1 547 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 FTSJ3Q8IY81 847 aaKnown RBP7.32□□□□□ -1.24
SDCBP-203ENST00000424270 TMEM57Q8N5G2 664 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 GPKOWQ92917 476 aaPredicted RBP eCLIP7.32□□□□□ -1.241e-6■□□□□ 11.3
SDCBP-203ENST00000424270 ZBTB10Q96DT7 871 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 KLHL5Q96PQ7 755 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 TMEM47Q9BQJ4 181 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 PDCD2LQ9BRP1 358 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 CELF4Q9BZC1 486 aaKnown RBP7.32□□□□□ -1.24
SDCBP-203ENST00000424270 UBA5Q9GZZ9 404 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 TMEM117Q9H0C3 514 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 TMX1Q9H3N1 280 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 VAT1LQ9HCJ6 419 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 SCUBE2Q9NQ36 999 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 IL17RBQ9NRM6 502 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 TMEM161AQ9NX61 479 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 MTF2Q9Y483 593 aaPredicted RBP7.32□□□□□ -1.24
SDCBP-203ENST00000424270 SQORQ9Y6N5 450 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 NUMBLQ9Y6R0 609 aa7.32□□□□□ -1.24
SDCBP-203ENST00000424270 GCN1Q92616 2671 aaKnown RBP7.32□□□□□ -1.24
SDCBP-203ENST00000424270 IGSF9BQ9UPX0 1349 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 ZFYVE26Q68DK2 2539 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 CCDC195A0A1B0GUA6 201 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 GPR182O15218 404 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 ZC3H11AO75152 810 aaKnown RBP eCLIP7.31□□□□□ -1.24
SDCBP-203ENST00000424270 PDHBP11177 359 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 ATP5JP18859 108 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 HOXA13P31271 388 aaPredicted RBP7.31□□□□□ -1.24
SDCBP-203ENST00000424270 TCF7P36402 384 aaPredicted RBP7.31□□□□□ -1.24
SDCBP-203ENST00000424270 TTC3P53804 2025 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 GPC5P78333 572 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 ADAM17P78536 824 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 PRKCQQ04759 706 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 ZNF543Q08ER8 600 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 PGM5Q15124 567 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 SF3A2Q15428 464 aaKnown RBP7.31□□□□□ -1.24
SDCBP-203ENST00000424270 CCDC6Q16204 474 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 SLC44A4Q53GD3 710 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 SOWAHCQ53LP3 525 aaPredicted RBP7.31□□□□□ -1.24
SDCBP-203ENST00000424270 STPG1Q5TH74 334 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 C15orf39Q6ZRI6 1047 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 PDZD3Q86UT5 571 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 FCHSD1Q86WN1 690 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 FEZF2Q8TBJ5 459 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 SMG7Q92540 1137 aaKnown RBP7.31□□□□□ -1.24
SDCBP-203ENST00000424270 APPBP2Q92624 585 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 TNPO1Q92973 898 aaKnown RBP7.31□□□□□ -1.24
SDCBP-203ENST00000424270 KIF1BPQ96EK5 621 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 MYADMQ96S97 322 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 MKNK1Q9BUB5 465 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 MAF1Q9H063 256 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 CPVLQ9H3G5 476 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 LTB4R2Q9NPC1 389 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 SLC2A4RGQ9NR83 387 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 RGS18Q9NS28 235 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms