RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 SH2D3AQ9BRG2 576 aa19.62■□□□□ 0.73
UPK3A-202ENST00000396082 LXNQ9BS40 222 aa19.62■□□□□ 0.73
UPK3A-202ENST00000396082 TTC12Q9H892 705 aaPredicted RBP19.62■□□□□ 0.73
UPK3A-202ENST00000396082 NOC2LQ9Y3T9 749 aaKnown RBP19.62■□□□□ 0.73
UPK3A-202ENST00000396082 RFXAPO00287 272 aa19.61■□□□□ 0.73
UPK3A-202ENST00000396082 WNT7AO00755 349 aa19.61■□□□□ 0.73
UPK3A-202ENST00000396082 GPR182O15218 404 aa19.61■□□□□ 0.73
UPK3A-202ENST00000396082 CD2BP2O95400 341 aaKnown RBP19.61■□□□□ 0.73
UPK3A-202ENST00000396082 IBSPP21815 317 aaPredicted RBP19.61■□□□□ 0.73
UPK3A-202ENST00000396082 DNM2P50570 870 aa19.61■□□□□ 0.73
UPK3A-202ENST00000396082 CYP4A11Q02928 519 aa19.61■□□□□ 0.73
UPK3A-202ENST00000396082 TARBP2Q15633 366 aaKnown RBP19.61■□□□□ 0.73
UPK3A-202ENST00000396082 PLA2G4FQ68DD2 849 aa19.61■□□□□ 0.73
UPK3A-202ENST00000396082 SPRED2Q7Z698 418 aa19.61■□□□□ 0.73
UPK3A-202ENST00000396082 ZNF710Q8N1W2 664 aa19.61■□□□□ 0.73
UPK3A-202ENST00000396082 MICALL1Q8N3F8 863 aa19.61■□□□□ 0.73
UPK3A-202ENST00000396082 TMEM40Q8WWA1 233 aa19.61■□□□□ 0.73
UPK3A-202ENST00000396082 DYDC2Q96IM9 177 aa19.61■□□□□ 0.73
UPK3A-202ENST00000396082 CDHR5Q9HBB8 845 aa19.61■□□□□ 0.73
UPK3A-202ENST00000396082 NOL7Q9UMY1 257 aaKnown RBP19.61■□□□□ 0.73
UPK3A-202ENST00000396082 EPOPA6NHQ4 379 aa19.6■□□□□ 0.73
UPK3A-202ENST00000396082 STBD1O95210 358 aa19.6■□□□□ 0.73
UPK3A-202ENST00000396082 SPIRE1Q08AE8 756 aa19.6■□□□□ 0.73
UPK3A-202ENST00000396082 CTTNQ14247 550 aaKnown RBP19.6■□□□□ 0.73
UPK3A-202ENST00000396082 ANO5Q75V66 913 aa19.6■□□□□ 0.73
UPK3A-202ENST00000396082 NOSTRINQ8IVI9 506 aa19.6■□□□□ 0.73
UPK3A-202ENST00000396082 LINC01465Q8N7H1 131 aa19.6■□□□□ 0.73
UPK3A-202ENST00000396082 LINC01599Q8WXQ3 324 aa19.6■□□□□ 0.73
UPK3A-202ENST00000396082 ZNF668Q96K58 619 aaPredicted RBP19.6■□□□□ 0.73
UPK3A-202ENST00000396082 JPH2Q9BR39 696 aaPredicted RBP19.6■□□□□ 0.73
UPK3A-202ENST00000396082 ERVK-5Q9HDB9 667 aa19.6■□□□□ 0.73
UPK3A-202ENST00000396082 RGL1Q9NZL6 768 aa19.6■□□□□ 0.73
UPK3A-202ENST00000396082 ST3GAL5Q9UNP4 418 aa19.6■□□□□ 0.73
UPK3A-202ENST00000396082 TTC3P53804 2025 aa19.59■□□□□ 0.73
UPK3A-202ENST00000396082 COL4A4P53420 1690 aaPredicted RBP19.59■□□□□ 0.73
UPK3A-202ENST00000396082 CDH23Q9H251 3354 aa19.59■□□□□ 0.73
UPK3A-202ENST00000396082 DENND3A2RUS2 1198 aa19.59■□□□□ 0.73
UPK3A-202ENST00000396082 GPR32O75388 356 aa19.59■□□□□ 0.73
UPK3A-202ENST00000396082 ERVK-21P61565 698 aa19.59■□□□□ 0.73
UPK3A-202ENST00000396082 CCDC85BQ15834 202 aaPredicted RBP19.59■□□□□ 0.73
UPK3A-202ENST00000396082 TTC38Q5R3I4 469 aa19.59■□□□□ 0.73
UPK3A-202ENST00000396082 OTUD6AQ7L8S5 288 aa19.59■□□□□ 0.73
UPK3A-202ENST00000396082 TPH2Q8IWU9 490 aa19.59■□□□□ 0.73
UPK3A-202ENST00000396082 C4orf19Q8IY42 314 aa19.59■□□□□ 0.73
UPK3A-202ENST00000396082 SP7Q8TDD2 431 aaPredicted RBP19.59■□□□□ 0.73
UPK3A-202ENST00000396082 NLRP7Q8WX94 980 aa19.59■□□□□ 0.73
UPK3A-202ENST00000396082 SLC7A3Q8WY07 619 aa19.59■□□□□ 0.73
UPK3A-202ENST00000396082 CEP170P1Q96L14 293 aa19.59■□□□□ 0.73
UPK3A-202ENST00000396082 CCDC43Q96MW1 224 aaKnown RBP19.59■□□□□ 0.73
UPK3A-202ENST00000396082 TSPYL2Q9H2G4 693 aaPredicted RBP19.59■□□□□ 0.73
UPK3A-202ENST00000396082 ZSWIM4Q9H7M6 989 aa19.59■□□□□ 0.73
UPK3A-202ENST00000396082 CYP26B1Q9NR63 512 aa19.59■□□□□ 0.73
UPK3A-202ENST00000396082 LRFN2Q9ULH4 789 aa19.59■□□□□ 0.73
UPK3A-202ENST00000396082 MAFO75444 373 aaPredicted RBP19.58■□□□□ 0.72
UPK3A-202ENST00000396082 STAG3L1P0CL83 205 aa19.58■□□□□ 0.72
UPK3A-202ENST00000396082 YWHABP31946 246 aaKnown RBP19.58■□□□□ 0.72
UPK3A-202ENST00000396082 GPC3P51654 580 aa19.58■□□□□ 0.72
UPK3A-202ENST00000396082 POLGP54098 1239 aaPredicted RBP19.58■□□□□ 0.72
UPK3A-202ENST00000396082 NPEPPSP55786 919 aa19.58■□□□□ 0.72
UPK3A-202ENST00000396082 ORC2Q13416 577 aaPredicted RBP19.58■□□□□ 0.72
UPK3A-202ENST00000396082 ZNF174Q15697 407 aa19.58■□□□□ 0.72
UPK3A-202ENST00000396082 MCTP1Q6DN14 999 aa19.58■□□□□ 0.72
UPK3A-202ENST00000396082 FAM228AQ86W67 206 aa19.58■□□□□ 0.72
UPK3A-202ENST00000396082 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.58■□□□□ 0.72
UPK3A-202ENST00000396082 NEK9Q8TD19 979 aa19.58■□□□□ 0.72
UPK3A-202ENST00000396082 GDPD5Q8WTR4 605 aa19.58■□□□□ 0.72
UPK3A-202ENST00000396082 MTMR9Q96QG7 549 aa19.58■□□□□ 0.72
UPK3A-202ENST00000396082 EIF2AK1Q9BQI3 630 aaKnown RBP19.58■□□□□ 0.72
UPK3A-202ENST00000396082 C17orf80Q9BSJ5 609 aa19.58■□□□□ 0.72
UPK3A-202ENST00000396082 TMEM60Q9H2L4 133 aa19.58■□□□□ 0.72
UPK3A-202ENST00000396082 TMX1Q9H3N1 280 aa19.58■□□□□ 0.72
UPK3A-202ENST00000396082 WRAP73Q9P2S5 460 aaPredicted RBP19.58■□□□□ 0.72
UPK3A-202ENST00000396082 ADGRA3Q8IWK6 1321 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 NLRC5Q86WI3 1866 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 COL4A6Q14031 1691 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 POTEMA6NI47 508 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 H3BQV1 296 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 OR52Z1P0C646 297 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 GJB2P29033 226 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 TRAPPC10P48553 1259 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 CDC42EP1Q00587 391 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 GRB10Q13322 594 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 DRP2Q13474 957 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 XKR9Q5GH70 373 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 FAM43BQ6ZT52 329 aaPredicted RBP19.57■□□□□ 0.72
UPK3A-202ENST00000396082 RTN4RL1Q86UN2 441 aaPredicted RBP19.57■□□□□ 0.72
UPK3A-202ENST00000396082 NPAS4Q8IUM7 802 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 EXOC8Q8IYI6 725 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 FIBCD1Q8N539 461 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 FBXO22Q8NEZ5 403 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 SAMD11Q96NU1 681 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 CEP89Q96ST8 783 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 ADAM2Q99965 735 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 BACH2Q9BYV9 841 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 ADAMTS10Q9H324 1103 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 C1orf112Q9NSG2 853 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 SUCLA2Q9P2R7 463 aaPredicted RBP19.57■□□□□ 0.72
UPK3A-202ENST00000396082 SMC3Q9UQE7 1217 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 PPME1Q9Y570 386 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms