RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 BTN3A3O00478 584 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 CSTF3Q12996 717 aaKnown RBP8.51□□□□□ -1.05
TRPS1-203ENST00000395715 GALNT4Q8N4A0 578 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 COPB2P35606 906 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 TALDO1P37837 337 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 ARL4AP40617 200 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 EMBQ6PCB8 327 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 NEK10Q6ZWH5 1172 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 METTL13Q8N6R0 699 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 DEPTORQ8TB45 409 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 HDHD2Q9H0R4 259 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 CENPXA8MT69 81 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 SUPT3HB4E1H0 165 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 PODXLO00592 558 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 KRT1P04264 644 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 UBTFL6P0CB48 400 aaPredicted RBP8.51□□□□□ -1.05
TRPS1-203ENST00000395715 MXD4Q14582 209 aaPredicted RBP8.51□□□□□ -1.05
TRPS1-203ENST00000395715 GPR162Q16538 588 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 RSBN1Q5VWQ0 802 aaPredicted RBP8.51□□□□□ -1.05
TRPS1-203ENST00000395715 SDE2Q6IQ49 451 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 P3H2Q8IVL5 708 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 BBS7Q8IWZ6 715 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 PANK4Q9NVE7 773 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 ERAP1Q9NZ08 941 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 NFU1Q9UMS0 254 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 FGD6Q6ZV73 1430 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 MAPKAPK2P49137 400 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 TCIRG1Q13488 830 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 TRIP13Q15645 432 aaPredicted RBP8.51□□□□□ -1.05
TRPS1-203ENST00000395715 ZYXQ15942 572 aaKnown RBP8.51□□□□□ -1.05
TRPS1-203ENST00000395715 FAM102BQ5T8I3 360 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 MNTQ99583 582 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 CALN1Q9BXU9 219 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 FKBP14Q9NWM8 211 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 DSEQ9UL01 958 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 GADD45BO75293 160 aaPredicted RBP8.51□□□□□ -1.05
TRPS1-203ENST00000395715 SNUPNO95149 360 aaKnown RBP8.51□□□□□ -1.05
TRPS1-203ENST00000395715 ATP6V1B1P15313 513 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 EFR3AQ14156 821 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 KRT39Q6A163 491 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 TPH2Q8IWU9 490 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 TTC8Q8TAM2 541 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 STAMQ92783 540 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 DDX17Q92841 729 aaKnown RBP8.51□□□□□ -1.05
TRPS1-203ENST00000395715 RGL1Q9NZL6 768 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 CCDC162PA2VCL2 907 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 ANGPT2O15123 496 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 IL6P05231 212 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 GSPT1P15170 499 aaKnown RBP8.51□□□□□ -1.05
TRPS1-203ENST00000395715 EIF6P56537 245 aaKnown RBP8.51□□□□□ -1.05
TRPS1-203ENST00000395715 SESN2P58004 480 aaPredicted RBP8.51□□□□□ -1.05
TRPS1-203ENST00000395715 FCHO2Q0JRZ9 810 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 KPNB1Q14974 876 aaKnown RBP8.51□□□□□ -1.05
TRPS1-203ENST00000395715 APOA5Q6Q788 366 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 BNIPLQ7Z465 357 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 REXO4Q9GZR2 422 aaKnown RBP8.51□□□□□ -1.05
TRPS1-203ENST00000395715 C8orf4Q9NR00 106 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 ATAD3AQ9NVI7 634 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 RNF113AO15541 343 aaKnown RBP8.51□□□□□ -1.05
TRPS1-203ENST00000395715 KRT38O76015 456 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 CDC25BP30305 580 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 MAGOHP61326 146 aaKnown RBP8.51□□□□□ -1.05
TRPS1-203ENST00000395715 PPIDQ08752 370 aaKnown RBP8.51□□□□□ -1.05
TRPS1-203ENST00000395715 CRYMQ14894 314 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 EXOC3L4Q17RC7 722 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 USP28Q96RU2 1077 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 SMAD5Q99717 465 aaKnown RBP8.51□□□□□ -1.05
TRPS1-203ENST00000395715 PLEKHA5Q9HAU0 1116 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 ABCB6Q9NP58 842 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 CCDC87Q9NVE4 849 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 PCDHB4Q9Y5E5 795 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 PEX1O43933 1283 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 CTCFP49711 727 aaPredicted RBP8.5□□□□□ -1.05
TRPS1-203ENST00000395715 BPIFB4P59827 614 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 DDIASQ8IXT1 998 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 RBM46Q8TBY0 533 aaKnown RBP8.5□□□□□ -1.05
TRPS1-203ENST00000395715 UBASH3BQ8TF42 649 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 GRAMD1AQ96CP6 724 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 RBM17Q96I25 401 aaKnown RBP8.5□□□□□ -1.05
TRPS1-203ENST00000395715 CHAMP1Q96JM3 812 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 EPS8L2Q9H6S3 715 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 MBIPQ9NS73 344 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 NSFL1CQ9UNZ2 370 aaKnown RBP8.5□□□□□ -1.05
TRPS1-203ENST00000395715 NUP107P57740 925 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 LRRC74AQ0VAA2 488 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 PDZK1Q5T2W1 519 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 DNAJC9Q8WXX5 260 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 DAPK2Q9UIK4 370 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 LCA5LO95447 670 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 CENPAP49450 140 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 PPP2R2AP63151 447 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 TTC33Q6PID6 262 aaPredicted RBP8.5□□□□□ -1.05
TRPS1-203ENST00000395715 KIAA0825Q8IV33 1275 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 GPBP1L1Q9HC44 474 aaPredicted RBP8.5□□□□□ -1.05
TRPS1-203ENST00000395715 ING3Q9NXR8 418 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 ANAPC7Q9UJX3 599 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 DMP1Q13316 513 aaPredicted RBP8.5□□□□□ -1.05
TRPS1-203ENST00000395715 USP39Q53GS9 565 aaKnown RBP8.5□□□□□ -1.05
TRPS1-203ENST00000395715 FAM47CQ5HY64 1035 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 ARMC4Q5T2S8 1044 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms