RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 C12orf65Q9H3J6 166 aaKnown RBP5.09□□□□□ -1.59
TRAV40-201ENST00000390467 PIF1Q9H611 641 aa5.09□□□□□ -1.59
TRAV40-201ENST00000390467 MAGEL2Q9UJ55 1249 aa5.09□□□□□ -1.59
TRAV40-201ENST00000390467 TESMINQ9Y4I5 508 aa5.09□□□□□ -1.59
TRAV40-201ENST00000390467 OPA1O60313 960 aa5.08□□□□□ -1.6
TRAV40-201ENST00000390467 MAFO75444 373 aaPredicted RBP5.08□□□□□ -1.6
TRAV40-201ENST00000390467 FSHBP01225 129 aa5.08□□□□□ -1.6
TRAV40-201ENST00000390467 AMHP03971 560 aa5.08□□□□□ -1.6
TRAV40-201ENST00000390467 ACO1P21399 889 aaKnown RBP5.08□□□□□ -1.6
TRAV40-201ENST00000390467 RGS3P49796 1198 aa5.08□□□□□ -1.6
TRAV40-201ENST00000390467 MEOX1P50221 254 aa5.08□□□□□ -1.6
TRAV40-201ENST00000390467 CCDC144BQ3MJ40 725 aa5.08□□□□□ -1.6
TRAV40-201ENST00000390467 HS1BP3Q53T59 392 aa5.08□□□□□ -1.6
TRAV40-201ENST00000390467 PIK3R6Q5UE93 754 aa5.08□□□□□ -1.6
TRAV40-201ENST00000390467 CREB3L3Q68CJ9 461 aa5.08□□□□□ -1.6
TRAV40-201ENST00000390467 GPR135Q8IZ08 494 aa5.08□□□□□ -1.6
TRAV40-201ENST00000390467 CALML6Q8TD86 181 aa5.08□□□□□ -1.6
TRAV40-201ENST00000390467 MRFAP1L1Q96HT8 127 aa5.08□□□□□ -1.6
TRAV40-201ENST00000390467 TMEM260Q9NX78 707 aa5.08□□□□□ -1.6
TRAV40-201ENST00000390467 PUF60Q9UHX1 559 aaKnown RBP5.08□□□□□ -1.6
TRAV40-201ENST00000390467 FAM184BQ9ULE4 1060 aa5.08□□□□□ -1.6
TRAV40-201ENST00000390467 PTPDC1A2A3K4 754 aa5.07□□□□□ -1.6
TRAV40-201ENST00000390467 B4E1Z4 1266 aa5.07□□□□□ -1.6
TRAV40-201ENST00000390467 CBX4O00257 560 aa5.07□□□□□ -1.6
TRAV40-201ENST00000390467 ASMTLO95671 621 aa5.07□□□□□ -1.6
TRAV40-201ENST00000390467 PTX3P26022 381 aaPredicted RBP5.07□□□□□ -1.6
TRAV40-201ENST00000390467 STAT3P40763 770 aa5.07□□□□□ -1.6
TRAV40-201ENST00000390467 FNTBP49356 437 aa5.07□□□□□ -1.6
TRAV40-201ENST00000390467 SLC6A3Q01959 620 aa5.07□□□□□ -1.6
TRAV40-201ENST00000390467 FOXL1Q12952 345 aa5.07□□□□□ -1.6
TRAV40-201ENST00000390467 SAFB2Q14151 953 aaKnown RBP eCLIP5.07□□□□□ -1.6
TRAV40-201ENST00000390467 PRKD1Q15139 912 aaPredicted RBP5.07□□□□□ -1.6
TRAV40-201ENST00000390467 ESRP1Q6NXG1 681 aaKnown RBP5.07□□□□□ -1.6
TRAV40-201ENST00000390467 RNF207Q6ZRF8 634 aa5.07□□□□□ -1.6
TRAV40-201ENST00000390467 POLNQ7Z5Q5 900 aa5.07□□□□□ -1.6
TRAV40-201ENST00000390467 ZNF808Q8N4W9 903 aaPredicted RBP5.07□□□□□ -1.6
TRAV40-201ENST00000390467 OR5AN1Q8NGI8 311 aa5.07□□□□□ -1.6
TRAV40-201ENST00000390467 EDAQ92838 391 aa5.07□□□□□ -1.6
TRAV40-201ENST00000390467 SEMA4AQ9H3S1 761 aa5.07□□□□□ -1.6
TRAV40-201ENST00000390467 AGO3Q9H9G7 860 aaKnown RBP5.07□□□□□ -1.6
TRAV40-201ENST00000390467 SLPIP03973 132 aa5.06□□□□□ -1.6
TRAV40-201ENST00000390467 JMJD7P0C870 316 aa5.06□□□□□ -1.6
TRAV40-201ENST00000390467 MSX2P35548 267 aaPredicted RBP5.06□□□□□ -1.6
TRAV40-201ENST00000390467 ANTXR2P58335 489 aa5.06□□□□□ -1.6
TRAV40-201ENST00000390467 PABPC4Q13310 644 aaKnown RBP eCLIP5.06□□□□□ -1.6
TRAV40-201ENST00000390467 ADAM15Q13444 863 aa5.06□□□□□ -1.6
TRAV40-201ENST00000390467 ACAP1Q15027 740 aa5.06□□□□□ -1.6
TRAV40-201ENST00000390467 ARHGAP44Q17R89 818 aa5.06□□□□□ -1.6
TRAV40-201ENST00000390467 MAMDC4Q6UXC1 1216 aa5.06□□□□□ -1.6
TRAV40-201ENST00000390467 KIAA1958Q8N8K9 716 aa5.06□□□□□ -1.6
TRAV40-201ENST00000390467 C16orf92Q96LL3 132 aa5.06□□□□□ -1.6
TRAV40-201ENST00000390467 B4GALT6Q9UBX8 382 aa5.06□□□□□ -1.6
TRAV40-201ENST00000390467 CTDP1Q9Y5B0 961 aaPredicted RBP5.06□□□□□ -1.6
TRAV40-201ENST00000390467 UBA6A0AVT1 1052 aaPredicted RBP5.05□□□□□ -1.6
TRAV40-201ENST00000390467 FAM83GA6ND36 823 aa5.05□□□□□ -1.6
TRAV40-201ENST00000390467 PLSCR1O15162 318 aa5.05□□□□□ -1.6
TRAV40-201ENST00000390467 SLC26A4O43511 780 aa5.05□□□□□ -1.6
TRAV40-201ENST00000390467 MYBPC3Q14896 1274 aa5.05□□□□□ -1.6
TRAV40-201ENST00000390467 C21orf62-AS1Q17RA5 79 aa5.05□□□□□ -1.6
TRAV40-201ENST00000390467 TKFCQ3LXA3 575 aa5.05□□□□□ -1.6
TRAV40-201ENST00000390467 CDCA2Q69YH5 1023 aaPredicted RBP5.05□□□□□ -1.6
TRAV40-201ENST00000390467 IGFL4Q6B9Z1 124 aa5.05□□□□□ -1.6
TRAV40-201ENST00000390467 SLFN12LQ6IEE8 588 aa5.05□□□□□ -1.6
TRAV40-201ENST00000390467 SHCBP1Q8NEM2 672 aa5.05□□□□□ -1.6
TRAV40-201ENST00000390467 UBXN4Q92575 508 aa5.05□□□□□ -1.6
TRAV40-201ENST00000390467 EXTL1Q92935 676 aa5.05□□□□□ -1.6
TRAV40-201ENST00000390467 RNPC3Q96LT9 517 aaKnown RBP5.05□□□□□ -1.6
TRAV40-201ENST00000390467 PCIF1Q9H4Z3 704 aa5.05□□□□□ -1.6
TRAV40-201ENST00000390467 H2AFY2Q9P0M6 372 aaPredicted RBP5.05□□□□□ -1.6
TRAV40-201ENST00000390467 CD2APQ9Y5K6 639 aa5.05□□□□□ -1.6
TRAV40-201ENST00000390467 H7C1D1 291 aa5.04□□□□□ -1.6
TRAV40-201ENST00000390467 SLC9A1P19634 815 aa5.04□□□□□ -1.6
TRAV40-201ENST00000390467 ACVRL1P37023 503 aa5.04□□□□□ -1.6
TRAV40-201ENST00000390467 RPS19P39019 145 aaKnown RBP5.04□□□□□ -1.6
TRAV40-201ENST00000390467 ADAM8P78325 824 aa5.04□□□□□ -1.6
TRAV40-201ENST00000390467 ROM1Q03395 351 aa5.04□□□□□ -1.6
TRAV40-201ENST00000390467 MAP3K12Q12852 859 aa5.04□□□□□ -1.6
TRAV40-201ENST00000390467 RIN1Q13671 783 aa5.04□□□□□ -1.6
TRAV40-201ENST00000390467 NRN1LQ496H8 165 aa5.04□□□□□ -1.6
TRAV40-201ENST00000390467 USP39Q53GS9 565 aaKnown RBP5.04□□□□□ -1.6
TRAV40-201ENST00000390467 NKD2Q969F2 451 aaPredicted RBP5.04□□□□□ -1.6
TRAV40-201ENST00000390467 TMEM176AQ96HP8 235 aa5.04□□□□□ -1.6
TRAV40-201ENST00000390467 MAML3Q96JK9 1138 aa5.04□□□□□ -1.6
TRAV40-201ENST00000390467 DRC1Q96MC2 740 aa5.04□□□□□ -1.6
TRAV40-201ENST00000390467 ELF4Q99607 663 aaPredicted RBP5.04□□□□□ -1.6
TRAV40-201ENST00000390467 CABP5Q9NP86 173 aa5.04□□□□□ -1.6
TRAV40-201ENST00000390467 ACSS2Q9NR19 701 aa5.04□□□□□ -1.6
TRAV40-201ENST00000390467 PLA2G3Q9NZ20 509 aa5.04□□□□□ -1.6
TRAV40-201ENST00000390467 SRRDQ9UH36 339 aa5.04□□□□□ -1.6
TRAV40-201ENST00000390467 RFPL3O75679 317 aa5.03□□□□□ -1.6
TRAV40-201ENST00000390467 DGCR2P98153 550 aa5.03□□□□□ -1.6
TRAV40-201ENST00000390467 ATP2C1P98194 919 aaPredicted RBP5.03□□□□□ -1.6
TRAV40-201ENST00000390467 GRM7Q14831 915 aa5.03□□□□□ -1.6
TRAV40-201ENST00000390467 EPHA7Q15375 998 aa5.03□□□□□ -1.6
TRAV40-201ENST00000390467 CFAP100Q494V2 611 aa5.03□□□□□ -1.6
TRAV40-201ENST00000390467 MIIPQ5JXC2 388 aa5.03□□□□□ -1.6
TRAV40-201ENST00000390467 PRAMEF9Q5VWM5 478 aa5.03□□□□□ -1.6
TRAV40-201ENST00000390467 KLHDC10Q6PID8 442 aa5.03□□□□□ -1.6
TRAV40-201ENST00000390467 ZFPM1Q8IX07 1006 aa5.03□□□□□ -1.6
TRAV40-201ENST00000390467 IL17DQ8TAD2 202 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms