RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 PDHA1P08559 390 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 MRPS25P82663 173 aaKnown RBP18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 LLGL1Q15334 1064 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 ANO5Q75V66 913 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 COG1Q8WTW3 980 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 INO80BQ9C086 356 aaPredicted RBP18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 SUN2Q9UH99 717 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 HNRNPCL1O60812 293 aaKnown RBP18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 PLEKHA8P1O95397 391 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 PRCPP42785 496 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 ARFIP2P53365 341 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 TBC1D9BQ66K14 1250 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 TMED8Q6PL24 325 aaPredicted RBP18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 LRRC4Q9HBW1 653 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 CALB1P05937 261 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 CD58P19256 250 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 KCNJ6P48051 423 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 ARHGDIAP52565 204 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 DHX34Q14147 1143 aaKnown RBP18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 PFKFB3Q16875 520 aaPredicted RBP18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 DGKHQ86XP1 1220 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 CYP26B1Q9NR63 512 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 SUCLA2Q9P2R7 463 aaPredicted RBP18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 NXF1Q9UBU9 619 aaKnown RBP18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 RASSF10A6NK89 507 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 FAM47CQ5HY64 1035 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 PPP1R18Q6NYC8 613 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 FLAD1Q8NFF5 587 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 APOL6Q9BWW8 343 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 WNT8AQ9H1J5 351 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 MAGED2Q9UNF1 606 aaPredicted RBP18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 L3MBTL1Q9Y468 752 aa18.29■□□□□ 0.52
SNAPC3-202ENST00000380821 ZBTB33Q86T24 672 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 VPS39Q96JC1 886 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 ADD3Q9UEY8 706 aaKnown RBP18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 TRPC5Q9UL62 973 aaPredicted RBP18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 ANKRD65E5RJM6 399 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 NR3C1P04150 777 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 RFX1P22670 979 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 USP17L2Q6R6M4 530 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 RSRC2Q7L4I2 434 aaKnown RBP18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 ICA1LQ8NDH6 482 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 THOC1Q96FV9 657 aaKnown RBP18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 MSTO1Q9BUK6 570 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 CPSF3Q9UKF6 684 aaKnown RBP18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 ARHGEF37A1IGU5 675 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 ZBTB24O43167 697 aaPredicted RBP18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 CRKLP46109 303 aaKnown RBP18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 COPS2P61201 443 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 LCA5Q86VQ0 697 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 KCNV2Q8TDN2 545 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 F8W8V4 182 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 PRR29P0C7W0 189 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 TFDP2Q14188 446 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 CTTNQ14247 550 aaKnown RBP18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 LRIG3Q6UXM1 1119 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 FAM160B2Q86V87 743 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 HIPK4Q8NE63 616 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 OSBPL1AQ9BXW6 950 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 SERPINB13Q9UIV8 391 aa18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 NOC2LQ9Y3T9 749 aaKnown RBP18.28■□□□□ 0.52
SNAPC3-202ENST00000380821 ACTN3Q08043 901 aaPredicted RBP18.27■□□□□ 0.52
SNAPC3-202ENST00000380821 TSTA3Q13630 321 aaPredicted RBP18.27■□□□□ 0.52
SNAPC3-202ENST00000380821 ARMCX2Q7L311 632 aa18.27■□□□□ 0.52
SNAPC3-202ENST00000380821 RPF1Q9H9Y2 349 aaKnown RBP18.27■□□□□ 0.52
SNAPC3-202ENST00000380821 KIAA1586Q9HCI6 787 aa18.27■□□□□ 0.52
SNAPC3-202ENST00000380821 ASNSD1Q9NWL6 643 aa18.27■□□□□ 0.52
SNAPC3-202ENST00000380821 SNX5Q9Y5X3 404 aa18.27■□□□□ 0.52
SNAPC3-202ENST00000380821 PPARGP37231 505 aaPredicted RBP18.27■□□□□ 0.52
SNAPC3-202ENST00000380821 PAPOLAP51003 745 aaKnown RBP18.27■□□□□ 0.52
SNAPC3-202ENST00000380821 STRIP2Q9ULQ0 834 aa18.27■□□□□ 0.52
SNAPC3-202ENST00000380821 ZRANB2O95218 330 aaKnown RBP eCLIP18.27■□□□□ 0.52
SNAPC3-202ENST00000380821 JAK3P52333 1124 aa18.27■□□□□ 0.52
SNAPC3-202ENST00000380821 RAD23BP54727 409 aa18.27■□□□□ 0.52
SNAPC3-202ENST00000380821 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.27■□□□□ 0.52
SNAPC3-202ENST00000380821 GFM2Q969S9 779 aaKnown RBP18.27■□□□□ 0.52
SNAPC3-202ENST00000380821 SMYD3Q9H7B4 428 aa18.27■□□□□ 0.52
SNAPC3-202ENST00000380821 ZC4H2Q9NQZ6 224 aa18.27■□□□□ 0.52
SNAPC3-202ENST00000380821 ADAM22Q9P0K1 906 aa18.27■□□□□ 0.52
SNAPC3-202ENST00000380821 MAN1A2O60476 641 aa18.27■□□□□ 0.51
SNAPC3-202ENST00000380821 SOX5P35711 763 aa18.27■□□□□ 0.51
SNAPC3-202ENST00000380821 HSPA9P38646 679 aaKnown RBP18.27■□□□□ 0.51
SNAPC3-202ENST00000380821 KCTD2Q14681 263 aa18.27■□□□□ 0.51
SNAPC3-202ENST00000380821 CAPRIN2Q6IMN6 1127 aaKnown RBP18.27■□□□□ 0.51
SNAPC3-202ENST00000380821 SPICE1Q8N0Z3 855 aa18.27■□□□□ 0.51
SNAPC3-202ENST00000380821 DCAF4Q8WV16 495 aa18.27■□□□□ 0.51
SNAPC3-202ENST00000380821 SCG3Q8WXD2 468 aaKnown RBP18.27■□□□□ 0.51
SNAPC3-202ENST00000380821 MTA3Q9BTC8 594 aa18.27■□□□□ 0.51
SNAPC3-202ENST00000380821 EPN3Q9H201 632 aa18.27■□□□□ 0.51
SNAPC3-202ENST00000380821 NCK2O43639 380 aa18.27■□□□□ 0.51
SNAPC3-202ENST00000380821 CATSPER1Q8NEC5 780 aa18.27■□□□□ 0.51
SNAPC3-202ENST00000380821 DTNBP1Q96EV8 351 aa18.27■□□□□ 0.51
SNAPC3-202ENST00000380821 FOXP2O15409 715 aa18.26■□□□□ 0.51
SNAPC3-202ENST00000380821 CCDC22O60826 627 aa18.26■□□□□ 0.51
SNAPC3-202ENST00000380821 BRAFP15056 766 aa18.26■□□□□ 0.51
SNAPC3-202ENST00000380821 RANBP1P43487 201 aa18.26■□□□□ 0.51
SNAPC3-202ENST00000380821 COASYQ13057 564 aa18.26■□□□□ 0.51
SNAPC3-202ENST00000380821 ZNF564Q8TBZ8 553 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms