RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 PLXNA4Q9HCM2 1894 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.95□□□□□ -0.66
C9orf85-202ENST00000377027 NOP56O00567 594 aaKnown RBP10.95□□□□□ -0.66
C9orf85-202ENST00000377027 EFCAB14O75071 495 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 TCF7P36402 384 aaPredicted RBP10.95□□□□□ -0.66
C9orf85-202ENST00000377027 LIFRP42702 1097 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 RAB15P59190 212 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 ARHGAP4P98171 946 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 TRAF1Q13077 416 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 WWC2Q6AWC2 1192 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 SGMS1Q86VZ5 419 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 CCDC82Q8N4S0 544 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 CTCFLQ8NI51 663 aaPredicted RBP10.95□□□□□ -0.66
C9orf85-202ENST00000377027 SMARCC2Q8TAQ2 1214 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 CYP2W1Q8TAV3 490 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 GPRASP2Q96D09 838 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 PGBD1Q96JS3 809 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 TMEM87BQ96K49 555 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 TCEANC2Q96MN5 208 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 EPHX3Q9H6B9 360 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 EHMT1Q9H9B1 1298 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 C11orf16Q9NQ32 467 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 LMCD1Q9NZU5 365 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 BRPF3Q9ULD4 1205 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 COG5Q9UP83 839 aa10.95□□□□□ -0.66
C9orf85-202ENST00000377027 EVPLQ92817 2033 aa10.94□□□□□ -0.66
C9orf85-202ENST00000377027 FNDC1Q4ZHG4 1894 aaPredicted RBP10.94□□□□□ -0.66
C9orf85-202ENST00000377027 MBLAC1A4D2B0 266 aaPredicted RBP10.94□□□□□ -0.66
C9orf85-202ENST00000377027 ERVH48-1M5A8F1 160 aa10.94□□□□□ -0.66
C9orf85-202ENST00000377027 CAND2O75155 1236 aa10.94□□□□□ -0.66
C9orf85-202ENST00000377027 MARK3P27448 753 aa10.94□□□□□ -0.66
C9orf85-202ENST00000377027 KIF5BP33176 963 aa10.94□□□□□ -0.66
C9orf85-202ENST00000377027 MCM5P33992 734 aa10.94□□□□□ -0.66
C9orf85-202ENST00000377027 EXOSC10Q01780 885 aaKnown RBP10.94□□□□□ -0.66
C9orf85-202ENST00000377027 LPIN1Q14693 890 aa10.94□□□□□ -0.66
C9orf85-202ENST00000377027 ADCK5Q3MIX3 580 aa10.94□□□□□ -0.66
C9orf85-202ENST00000377027 EPC2Q52LR7 807 aa10.94□□□□□ -0.66
C9orf85-202ENST00000377027 XRRA1Q6P2D8 792 aa10.94□□□□□ -0.66
C9orf85-202ENST00000377027 UBE2ZQ9H832 354 aaPredicted RBP10.94□□□□□ -0.66
C9orf85-202ENST00000377027 PCDHA6Q9UN73 950 aa10.94□□□□□ -0.66
C9orf85-202ENST00000377027 INSL6Q9Y581 213 aa10.94□□□□□ -0.66
C9orf85-202ENST00000377027 PCDHA8Q9Y5H6 950 aa10.94□□□□□ -0.66
C9orf85-202ENST00000377027 CCDC69A6NI79 296 aa10.93□□□□□ -0.66
C9orf85-202ENST00000377027 UPP2O95045 317 aa10.93□□□□□ -0.66
C9orf85-202ENST00000377027 AMHP03971 560 aa10.93□□□□□ -0.66
C9orf85-202ENST00000377027 GHRP10912 638 aa10.93□□□□□ -0.66
C9orf85-202ENST00000377027 ITGB3BPQ13352 177 aaPredicted RBP10.93□□□□□ -0.66
C9orf85-202ENST00000377027 GRIK4Q16099 956 aa10.93□□□□□ -0.66
C9orf85-202ENST00000377027 APOA5Q6Q788 366 aa10.93□□□□□ -0.66
C9orf85-202ENST00000377027 CASC1Q6TDU7 716 aa10.93□□□□□ -0.66
C9orf85-202ENST00000377027 NFXL1Q6ZNB6 911 aa10.93□□□□□ -0.66
C9orf85-202ENST00000377027 RPAINQ86UA6 219 aa10.93□□□□□ -0.66
C9orf85-202ENST00000377027 MICU3Q86XE3 530 aa10.93□□□□□ -0.66
C9orf85-202ENST00000377027 FANCBQ8NB91 859 aa10.93□□□□□ -0.66
C9orf85-202ENST00000377027 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.93□□□□□ -0.66
C9orf85-202ENST00000377027 SEPT8Q92599 483 aa10.93□□□□□ -0.66
C9orf85-202ENST00000377027 LZTS2Q9BRK4 669 aa10.93□□□□□ -0.66
C9orf85-202ENST00000377027 PSTPIP2Q9H939 334 aa10.93□□□□□ -0.66
C9orf85-202ENST00000377027 AGO3Q9H9G7 860 aaKnown RBP10.93□□□□□ -0.66
C9orf85-202ENST00000377027 JADE2Q9NQC1 790 aa10.93□□□□□ -0.66
C9orf85-202ENST00000377027 PGPEP1Q9NXJ5 209 aa10.93□□□□□ -0.66
C9orf85-202ENST00000377027 SEC63Q9UGP8 760 aaKnown RBP10.93□□□□□ -0.66
C9orf85-202ENST00000377027 NRCAMQ92823 1304 aa10.92□□□□□ -0.66
C9orf85-202ENST00000377027 H3BNC9 293 aa10.92□□□□□ -0.66
C9orf85-202ENST00000377027 ARP10275 920 aa10.92□□□□□ -0.66
C9orf85-202ENST00000377027 IL9P15248 144 aa10.92□□□□□ -0.66
C9orf85-202ENST00000377027 SOX11P35716 441 aa10.92□□□□□ -0.66
C9orf85-202ENST00000377027 PPFIA1Q13136 1202 aa10.92□□□□□ -0.66
C9orf85-202ENST00000377027 MTMR1Q13613 665 aa10.92□□□□□ -0.66
C9orf85-202ENST00000377027 COL19A1Q14993 1142 aa10.92□□□□□ -0.66
C9orf85-202ENST00000377027 AAK1Q2M2I8 961 aa10.92□□□□□ -0.66
C9orf85-202ENST00000377027 FBXO47Q5MNV8 452 aa10.92□□□□□ -0.66
C9orf85-202ENST00000377027 RNF20Q5VTR2 975 aa10.92□□□□□ -0.66
C9orf85-202ENST00000377027 RTN4RL1Q86UN2 441 aaPredicted RBP10.92□□□□□ -0.66
C9orf85-202ENST00000377027 TRAPPC12Q8WVT3 735 aa10.92□□□□□ -0.66
C9orf85-202ENST00000377027 SEPT1Q8WYJ6 367 aa10.92□□□□□ -0.66
C9orf85-202ENST00000377027 CUL5Q93034 780 aa10.92□□□□□ -0.66
C9orf85-202ENST00000377027 IFIH1Q9BYX4 1025 aaKnown RBP10.92□□□□□ -0.66
C9orf85-202ENST00000377027 ATP13A2Q9NQ11 1180 aa10.92□□□□□ -0.66
C9orf85-202ENST00000377027 ANO2Q9NQ90 1003 aa10.92□□□□□ -0.66
C9orf85-202ENST00000377027 TMPRSS4Q9NRS4 437 aa10.92□□□□□ -0.66
C9orf85-202ENST00000377027 TMEM260Q9NX78 707 aa10.92□□□□□ -0.66
C9orf85-202ENST00000377027 ZNF215Q9UL58 517 aaPredicted RBP10.92□□□□□ -0.66
C9orf85-202ENST00000377027 MYH9P35579 1960 aaKnown RBP10.91□□□□□ -0.66
C9orf85-202ENST00000377027 STXBP3O00186 592 aa10.91□□□□□ -0.66
C9orf85-202ENST00000377027 CCNE2O96020 404 aa10.91□□□□□ -0.66
C9orf85-202ENST00000377027 CPA1P15085 419 aa10.91□□□□□ -0.66
C9orf85-202ENST00000377027 CDC27P30260 824 aa10.91□□□□□ -0.66
C9orf85-202ENST00000377027 GNAQP50148 359 aa10.91□□□□□ -0.66
C9orf85-202ENST00000377027 BMP2KLQ5H9B9 411 aa10.91□□□□□ -0.66
C9orf85-202ENST00000377027 HEATR3Q7Z4Q2 680 aa10.91□□□□□ -0.66
C9orf85-202ENST00000377027 NLRX1Q86UT6 975 aa10.91□□□□□ -0.66
C9orf85-202ENST00000377027 TMEM192Q8IY95 271 aa10.91□□□□□ -0.66
C9orf85-202ENST00000377027 NEK9Q8TD19 979 aa10.91□□□□□ -0.66
C9orf85-202ENST00000377027 DNAJB3Q8WWF6 145 aa10.91□□□□□ -0.66
C9orf85-202ENST00000377027 CRYGNQ8WXF5 182 aa10.91□□□□□ -0.66
C9orf85-202ENST00000377027 ZNF689Q96CS4 500 aaPredicted RBP10.91□□□□□ -0.66
C9orf85-202ENST00000377027 MRPL38Q96DV4 380 aaKnown RBP10.91□□□□□ -0.66
C9orf85-202ENST00000377027 YME1L1Q96TA2 773 aa10.91□□□□□ -0.66
C9orf85-202ENST00000377027 MXRA8Q9BRK3 442 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms