RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 PDXKO00764 312 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 ZNF263O14978 683 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 FAM13AO94988 1023 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 RPL13P26373 211 aaKnown RBP13.28□□□□□ -0.28
HMGCL-202ENST00000374487 KCNH2Q12809 1159 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 SLC9C1Q4G0N8 1177 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 SH3D19Q5HYK7 790 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 SFMBT2Q5VUG0 894 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 RINT1Q6NUQ1 792 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 FASTKD5Q7L8L6 764 aaKnown RBP13.28□□□□□ -0.28
HMGCL-202ENST00000374487 TXLNBQ8N3L3 684 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 WDR11Q9BZH6 1224 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 ZFYVE28Q9HCC9 887 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 JADE2Q9NQC1 790 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 FAM53CQ9NYF3 392 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 CCPG1Q9ULG6 757 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 ZSWIM8A7E2V4 1837 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 CCDC151A5D8V7 595 aa13.27□□□□□ -0.28
HMGCL-202ENST00000374487 SFI1A8K8P3 1242 aa13.27□□□□□ -0.28
HMGCL-202ENST00000374487 ATP8B1O43520 1251 aa13.27□□□□□ -0.28
HMGCL-202ENST00000374487 TLR2O60603 784 aa13.27□□□□□ -0.28
HMGCL-202ENST00000374487 RHOXF2BP0C7M4 288 aa13.27□□□□□ -0.28
HMGCL-202ENST00000374487 GAP43P17677 238 aa13.27□□□□□ -0.28
HMGCL-202ENST00000374487 MAGEA1P43355 309 aa13.27□□□□□ -0.28
HMGCL-202ENST00000374487 SETQ01105 290 aaPredicted RBP13.27□□□□□ -0.28
HMGCL-202ENST00000374487 BRD3Q15059 726 aa13.27□□□□□ -0.28
HMGCL-202ENST00000374487 PAPD7Q5XG87 772 aaKnown RBP13.27□□□□□ -0.28
HMGCL-202ENST00000374487 EPM2AIP1Q7L775 607 aaPredicted RBP13.27□□□□□ -0.28
HMGCL-202ENST00000374487 FRMD5Q7Z6J6 570 aa13.27□□□□□ -0.28
HMGCL-202ENST00000374487 ZC3H3Q8IXZ2 948 aaKnown RBP13.27□□□□□ -0.28
HMGCL-202ENST00000374487 MYCT1Q8N699 235 aa13.27□□□□□ -0.28
HMGCL-202ENST00000374487 TRIM58Q8NG06 486 aa13.27□□□□□ -0.28
HMGCL-202ENST00000374487 AGBL1Q96MI9 1066 aa13.27□□□□□ -0.28
HMGCL-202ENST00000374487 RHOXF2Q9BQY4 288 aa13.27□□□□□ -0.28
HMGCL-202ENST00000374487 ADGRA2Q96PE1 1338 aa13.27□□□□□ -0.29
HMGCL-202ENST00000374487 FKTNO75072 461 aa13.27□□□□□ -0.29
HMGCL-202ENST00000374487 TACC1O75410 805 aa13.27□□□□□ -0.29
HMGCL-202ENST00000374487 LCA5LO95447 670 aa13.27□□□□□ -0.29
HMGCL-202ENST00000374487 XRCC5P13010 732 aaKnown RBP13.27□□□□□ -0.29
HMGCL-202ENST00000374487 C17orf99Q6UX52 265 aa13.27□□□□□ -0.29
HMGCL-202ENST00000374487 PRPF38AQ8NAV1 312 aaKnown RBP13.27□□□□□ -0.29
HMGCL-202ENST00000374487 SYN2Q92777 582 aaPredicted RBP13.27□□□□□ -0.29
HMGCL-202ENST00000374487 PURBQ96QR8 312 aaKnown RBP13.27□□□□□ -0.29
HMGCL-202ENST00000374487 NACC1Q96RE7 527 aa13.27□□□□□ -0.29
HMGCL-202ENST00000374487 CFHR5Q9BXR6 569 aa13.27□□□□□ -0.29
HMGCL-202ENST00000374487 ASCC2Q9H1I8 757 aaPredicted RBP13.27□□□□□ -0.29
HMGCL-202ENST00000374487 ANKZF1Q9H8Y5 726 aa13.27□□□□□ -0.29
HMGCL-202ENST00000374487 TYW1Q9NV66 732 aaKnown RBP13.27□□□□□ -0.29
HMGCL-202ENST00000374487 SSU72P8A0A1W2PR75 194 aa13.26□□□□□ -0.29
HMGCL-202ENST00000374487 ANO9A1A5B4 782 aa13.26□□□□□ -0.29
HMGCL-202ENST00000374487 IPO5O00410 1097 aaKnown RBP13.26□□□□□ -0.29
HMGCL-202ENST00000374487 SRGAP2O75044 1071 aa13.26□□□□□ -0.29
HMGCL-202ENST00000374487 NOL4O94818 638 aa13.26□□□□□ -0.29
HMGCL-202ENST00000374487 SERPING1P05155 500 aa13.26□□□□□ -0.29
HMGCL-202ENST00000374487 ICAM1P05362 532 aa13.26□□□□□ -0.29
HMGCL-202ENST00000374487 ARP10275 920 aa13.26□□□□□ -0.29
HMGCL-202ENST00000374487 VCAM1P19320 739 aa13.26□□□□□ -0.29
HMGCL-202ENST00000374487 HOXD13P35453 343 aa13.26□□□□□ -0.29
HMGCL-202ENST00000374487 GFPT1Q06210 699 aaPredicted RBP13.26□□□□□ -0.29
HMGCL-202ENST00000374487 TEKT3Q9BXF9 490 aa13.26□□□□□ -0.29
HMGCL-202ENST00000374487 OLFML3Q9NRN5 406 aa13.26□□□□□ -0.29
HMGCL-202ENST00000374487 TMOD4Q9NZQ9 345 aa13.26□□□□□ -0.29
HMGCL-202ENST00000374487 ERLIN1O75477 346 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 NR3C1P04150 777 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 EPB41P11171 864 aaKnown RBP13.25□□□□□ -0.29
HMGCL-202ENST00000374487 SP3Q02447 781 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 ARID5AQ03989 594 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 CKAP4Q07065 602 aaKnown RBP13.25□□□□□ -0.29
HMGCL-202ENST00000374487 RAPGEF1Q13905 1077 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 BMT2Q1RMZ1 405 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 DCAF17Q5H9S7 520 aaPredicted RBP13.25□□□□□ -0.29
HMGCL-202ENST00000374487 TCERG1LQ5VWI1 586 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 C1orf186Q6ZWK4 172 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 ANKRD13CQ8N6S4 541 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 PROCA1Q8NCQ7 364 aaPredicted RBP13.25□□□□□ -0.29
HMGCL-202ENST00000374487 CAGE1Q8TC20 777 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 CAPZA3Q96KX2 299 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 ALS2CR12Q96Q35 445 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 KIAA1683Q9H0B3 1180 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 UNC45AQ9H3U1 944 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 PARVGQ9HBI0 331 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 METTL14Q9HCE5 456 aaKnown RBP13.25□□□□□ -0.29
HMGCL-202ENST00000374487 TXNRD2Q9NNW7 524 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 LUC7LQ9NQ29 371 aaKnown RBP13.25□□□□□ -0.29
HMGCL-202ENST00000374487 JRKLQ9Y4A0 524 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 C19orf81C9J6K1 198 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 ZBTB39O15060 712 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 AFPP02771 609 aaKnown RBP13.25□□□□□ -0.29
HMGCL-202ENST00000374487 TUBBP07437 444 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 MUTP22033 750 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 MAPK8IP2Q13387 824 aaPredicted RBP13.25□□□□□ -0.29
HMGCL-202ENST00000374487 EPHA7Q15375 998 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 HGSNATQ68CP4 663 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 MCF2L2Q86YR7 1114 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 TNS4Q8IZW8 715 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 CPXCR1Q8N123 301 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 MSANTD4Q8NCY6 345 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 LPAR1Q92633 364 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 MXRA8Q9BRK3 442 aa13.25□□□□□ -0.29
HMGCL-202ENST00000374487 RPAP3Q9H6T3 665 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms