RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 TUT1Q9H6E5 874 aaKnown RBP12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 ARHGAP28Q9P2N2 729 aa12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 ARVCFO00192 962 aa12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 NAMPTP43490 491 aa12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 GTF2BQ00403 316 aa12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 MXD4Q14582 209 aaPredicted RBP12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 SLC9A9Q8IVB4 645 aa12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 DAW1Q8N136 415 aa12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 SYAP1Q96A49 352 aaPredicted RBP12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 BCAS3Q9H6U6 928 aa12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 A0A1W2PQ45 241 aaPredicted RBP12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 A0A1W2PQY0 241 aa12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 POTEB3A0JP26 581 aa12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 LONRF3Q496Y0 759 aa12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 POTEBQ6S5H4 581 aa12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 ZNF507Q8TCN5 953 aa12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 COPS5Q92905 334 aa12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 ADAMTS10Q9H324 1103 aa12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 ATP6V0A4Q9HBG4 840 aa12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 ANK1P16157 1881 aa12.42□□□□□ -0.42
CSGALNACT2-201ENST00000374466 LIG1P18858 919 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 TMEM63BQ5T3F8 832 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 SWSAP1Q6NVH7 229 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 ANP32EQ9BTT0 268 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 MYADML2A6NDP7 307 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 DTNBO60941 627 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 CXCL10P02778 98 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 SMIM10L2AP0DMW4 78 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 SMIM10L2BP0DMW5 78 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 CDC25AP30304 524 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 PPP2R5AQ15172 486 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 KCNA10Q16322 511 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 FAM126BQ8IXS8 530 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 KIAA0355O15063 1070 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 NR1I2O75469 434 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 PLS3P13797 630 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 AXLP30530 894 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 STAT6P42226 847 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 POSTNQ15063 836 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 SRGAP1Q7Z6B7 1085 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 PRIMPOLQ96LW4 560 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 USP20Q9Y2K6 914 aa12.41□□□□□ -0.42
CSGALNACT2-201ENST00000374466 PROZP22891 400 aa12.4□□□□□ -0.42
CSGALNACT2-201ENST00000374466 PRAMEF19Q5SWL8 479 aa12.4□□□□□ -0.42
CSGALNACT2-201ENST00000374466 WDR78Q5VTH9 848 aa12.4□□□□□ -0.42
CSGALNACT2-201ENST00000374466 C2orf40Q9H1Z8 148 aa12.4□□□□□ -0.42
CSGALNACT2-201ENST00000374466 KIAA1024Q9UPX6 916 aa12.4□□□□□ -0.42
CSGALNACT2-201ENST00000374466 MYMKA6NI61 221 aa12.4□□□□□ -0.42
CSGALNACT2-201ENST00000374466 NOP56O00567 594 aaKnown RBP12.4□□□□□ -0.42
CSGALNACT2-201ENST00000374466 PMM2O15305 246 aa12.4□□□□□ -0.42
CSGALNACT2-201ENST00000374466 GPR32O75388 356 aa12.4□□□□□ -0.42
CSGALNACT2-201ENST00000374466 KARSQ15046 597 aaKnown RBP12.4□□□□□ -0.42
CSGALNACT2-201ENST00000374466 NFKBIBQ15653 356 aa12.4□□□□□ -0.42
CSGALNACT2-201ENST00000374466 KIAA1468Q9P260 1216 aa12.4□□□□□ -0.42
CSGALNACT2-201ENST00000374466 TELO2Q9Y4R8 837 aa12.4□□□□□ -0.42
CSGALNACT2-201ENST00000374466 SRCAPQ6ZRS2 3230 aa12.4□□□□□ -0.42
CSGALNACT2-201ENST00000374466 BACH1O14867 736 aa12.4□□□□□ -0.42
CSGALNACT2-201ENST00000374466 PRPF40AO75400 957 aaKnown RBP12.4□□□□□ -0.42
CSGALNACT2-201ENST00000374466 MARSP56192 900 aaKnown RBP12.4□□□□□ -0.42
CSGALNACT2-201ENST00000374466 GRIK4Q16099 956 aa12.4□□□□□ -0.42
CSGALNACT2-201ENST00000374466 CEP57L1Q8IYX8 460 aa12.4□□□□□ -0.42
CSGALNACT2-201ENST00000374466 PP2D1A8MPX8 630 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 POLR2DO15514 142 aaKnown RBP12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 DYNC1LI2O43237 492 aaPredicted RBP12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 ASGR1P07306 291 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 NCLP19338 710 aaKnown RBP12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 GRM1Q13255 1194 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 ZNF658Q5TYW1 1059 aaPredicted RBP12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 PADI6Q6TGC4 694 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 CCDC155Q8N6L0 562 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 RGL1Q9NZL6 768 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 SERTAD1Q9UHV2 236 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 COL4A3BPQ9Y5P4 624 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 C17orf102A2RUQ5 167 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 SMC2O95347 1197 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 EFNA5P52803 228 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 PSMC6P62333 389 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 ZCWPW2Q504Y3 356 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 POTEGQ6S5H5 508 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 GUF1Q8N442 669 aaKnown RBP12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 RETREG2Q8NC44 543 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 U2AF1L4Q8WU68 220 aaKnown RBP12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 FZD8Q9H461 694 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 RNPEPQ9H4A4 650 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 KBTBD13C9JR72 458 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 ERCC5P28715 1186 aaPredicted RBP12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 EMC2Q15006 297 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 KYAT1Q16773 422 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 ODR4Q5SWX8 454 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 SLC39A5Q6ZMH5 540 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 TRAF3IP3Q9Y228 551 aa12.39□□□□□ -0.43
CSGALNACT2-201ENST00000374466 HIC1Q14526 733 aa12.38□□□□□ -0.43
CSGALNACT2-201ENST00000374466 L1TD1Q5T7N2 865 aaKnown RBP12.38□□□□□ -0.43
CSGALNACT2-201ENST00000374466 SAMD1Q6SPF0 538 aaPredicted RBP12.38□□□□□ -0.43
CSGALNACT2-201ENST00000374466 ZPBP2Q6X784 338 aa12.38□□□□□ -0.43
CSGALNACT2-201ENST00000374466 LMBR1Q8WVP7 490 aa12.38□□□□□ -0.43
CSGALNACT2-201ENST00000374466 CHST12Q9NRB3 414 aa12.38□□□□□ -0.43
CSGALNACT2-201ENST00000374466 A0A1B0GVL5 298 aa12.38□□□□□ -0.43
CSGALNACT2-201ENST00000374466 PFKMP08237 780 aa12.38□□□□□ -0.43
CSGALNACT2-201ENST00000374466 CTTNQ14247 550 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms