RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 MAML3Q96JK9 1138 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 TMEM106CQ9BVX2 250 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 VTA1Q9NP79 307 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 SAMSN1Q9NSI8 373 aaKnown RBP13.34□□□□□ -0.27
USF1-203ENST00000368021 SLC5A4Q9NY91 659 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 GABBR1Q9UBS5 961 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 IGKV6D-21A0A0A0MT36 114 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 SERPINC1P01008 464 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 CACNB1Q02641 598 aaPredicted RBP13.34□□□□□ -0.27
USF1-203ENST00000368021 LRRC63Q05C16 580 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 SPAG1Q07617 926 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 CACNB2Q08289 660 aaPredicted RBP13.34□□□□□ -0.27
USF1-203ENST00000368021 SWSAP1Q6NVH7 229 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 PADI6Q6TGC4 694 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 OTUD6AQ7L8S5 288 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 EEPD1Q7L9B9 569 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 CCDC60Q8IWA6 550 aaPredicted RBP13.34□□□□□ -0.27
USF1-203ENST00000368021 MSL3Q8N5Y2 521 aaKnown RBP13.34□□□□□ -0.27
USF1-203ENST00000368021 SCFD2Q8WU76 684 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 CTAGE1Q96RT6 745 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 THAP9Q9H5L6 903 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 PARVGQ9HBI0 331 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 IFNKQ9P0W0 207 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 MAFBQ9Y5Q3 323 aaPredicted RBP13.34□□□□□ -0.27
USF1-203ENST00000368021 GOLGA6L6A8MZA4 724 aa13.33□□□□□ -0.28
USF1-203ENST00000368021 ZNF862O60290 1169 aa13.33□□□□□ -0.28
USF1-203ENST00000368021 FAM13AO94988 1023 aa13.33□□□□□ -0.28
USF1-203ENST00000368021 GGPS1O95749 300 aa13.33□□□□□ -0.28
USF1-203ENST00000368021 TPM3P06753 285 aa13.33□□□□□ -0.28
USF1-203ENST00000368021 CNGA1P29973 690 aa13.33□□□□□ -0.28
USF1-203ENST00000368021 PMS1P54277 932 aaKnown RBP13.33□□□□□ -0.28
USF1-203ENST00000368021 UBASH3AP57075 661 aa13.33□□□□□ -0.28
USF1-203ENST00000368021 TTLL4Q14679 1199 aa13.33□□□□□ -0.28
USF1-203ENST00000368021 MFSD14CQ5VZR4 134 aa13.33□□□□□ -0.28
USF1-203ENST00000368021 FBXO16Q8IX29 292 aaPredicted RBP13.33□□□□□ -0.28
USF1-203ENST00000368021 CCDC43Q96MW1 224 aaKnown RBP13.33□□□□□ -0.28
USF1-203ENST00000368021 DEFB118Q96PH6 123 aa13.33□□□□□ -0.28
USF1-203ENST00000368021 XPO4Q9C0E2 1151 aaKnown RBP13.33□□□□□ -0.28
USF1-203ENST00000368021 MYH11P35749 1972 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 TRIM49BA6NDI0 452 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 LRRC10BA6NIK2 292 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 RSPH10B2B2RC85 870 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 STBD1O95210 358 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 ARIH2O95376 493 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 RSPH10BP0C881 870 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 EN2P19622 333 aaPredicted RBP13.32□□□□□ -0.28
USF1-203ENST00000368021 CCND3P30281 292 aaPredicted RBP13.32□□□□□ -0.28
USF1-203ENST00000368021 LY6KQ17RY6 165 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 CELF3Q5SZQ8 465 aaKnown RBP13.32□□□□□ -0.28
USF1-203ENST00000368021 ANO5Q75V66 913 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 EPM2AIP1Q7L775 607 aaPredicted RBP13.32□□□□□ -0.28
USF1-203ENST00000368021 SFR1Q86XK3 245 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 AFAP1L1Q8TED9 768 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 SEPT1Q8WYJ6 367 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 DUSP9Q99956 384 aaKnown RBP13.32□□□□□ -0.28
USF1-203ENST00000368021 SEMA6BQ9H3T3 888 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 ZHX3Q9H4I2 956 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 MLXIPQ9HAP2 919 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 HMX1Q9NP08 348 aaPredicted RBP13.32□□□□□ -0.28
USF1-203ENST00000368021 GSTTP1A0A1W2PQM5 241 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 RBM47A0AV96 593 aaKnown RBP13.32□□□□□ -0.28
USF1-203ENST00000368021 BACH1O14867 736 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 PRKCEQ02156 737 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 SP4Q02446 784 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 BMT2Q1RMZ1 405 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 XKR3Q5GH77 459 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 ANKRD40Q6AI12 368 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 APTXQ7Z2E3 356 aaKnown RBP13.32□□□□□ -0.28
USF1-203ENST00000368021 CSGALNACT2Q8N6G5 542 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 GLIS3Q8NEA6 775 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 ANKRD20A12PQ8NF67 263 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 SCFD1Q8WVM8 642 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 TINF2Q9BSI4 451 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 KATNBL1Q9H079 304 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 ZNF302Q9NR11 478 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 CALCOCO1Q9P1Z2 691 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 TELO2Q9Y4R8 837 aa13.32□□□□□ -0.28
USF1-203ENST00000368021 A0A1B0GTH6 734 aa13.31□□□□□ -0.28
USF1-203ENST00000368021 EIF3DO15371 548 aaKnown RBP eCLIP13.31□□□□□ -0.28
USF1-203ENST00000368021 TNRC18O15417 2968 aaPredicted RBP13.31□□□□□ -0.28
USF1-203ENST00000368021 FGFR1OPO95684 399 aaKnown RBP13.31□□□□□ -0.28
USF1-203ENST00000368021 PTMAP06454 111 aaKnown RBP13.31□□□□□ -0.28
USF1-203ENST00000368021 TXNP10599 105 aaKnown RBP13.31□□□□□ -0.28
USF1-203ENST00000368021 EEF1GP26641 437 aaKnown RBP13.31□□□□□ -0.28
USF1-203ENST00000368021 MAPK7Q13164 816 aa13.31□□□□□ -0.28
USF1-203ENST00000368021 ZCWPW2Q504Y3 356 aa13.31□□□□□ -0.28
USF1-203ENST00000368021 HSP90AA4PQ58FG1 418 aa13.31□□□□□ -0.28
USF1-203ENST00000368021 XKR9Q5GH70 373 aa13.31□□□□□ -0.28
USF1-203ENST00000368021 FAM160B1Q5W0V3 765 aa13.31□□□□□ -0.28
USF1-203ENST00000368021 OLFML2BQ68BL8 750 aa13.31□□□□□ -0.28
USF1-203ENST00000368021 TAPT1Q6NXT6 567 aa13.31□□□□□ -0.28
USF1-203ENST00000368021 PPP4R3CPQ6ZMV5 832 aa13.31□□□□□ -0.28
USF1-203ENST00000368021 FAM114A1Q8IWE2 563 aa13.31□□□□□ -0.28
USF1-203ENST00000368021 DAW1Q8N136 415 aa13.31□□□□□ -0.28
USF1-203ENST00000368021 MYCT1Q8N699 235 aa13.31□□□□□ -0.28
USF1-203ENST00000368021 TSG101Q99816 390 aa13.31□□□□□ -0.28
USF1-203ENST00000368021 ARID3AQ99856 593 aa13.31□□□□□ -0.28
USF1-203ENST00000368021 FGFBP2Q9BYJ0 223 aa13.31□□□□□ -0.28
USF1-203ENST00000368021 MRPL44Q9H9J2 332 aaKnown RBP13.31□□□□□ -0.28
USF1-203ENST00000368021 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms