RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 CYP21A2P08686 494 aa17.15■□□□□ 0.34
COL18A1-203ENST00000359759 ZNF211Q13398 564 aaPredicted RBP17.15■□□□□ 0.34
COL18A1-203ENST00000359759 MXD4Q14582 209 aaPredicted RBP17.15■□□□□ 0.34
COL18A1-203ENST00000359759 SLC26A7Q8TE54 656 aa17.15■□□□□ 0.34
COL18A1-203ENST00000359759 TTC25Q96NG3 672 aa17.15■□□□□ 0.34
COL18A1-203ENST00000359759 FSD1LQ9BXM9 530 aa17.15■□□□□ 0.34
COL18A1-203ENST00000359759 RNF26Q9BY78 433 aaPredicted RBP17.15■□□□□ 0.34
COL18A1-203ENST00000359759 ANTXR1Q9H6X2 564 aa17.15■□□□□ 0.34
COL18A1-203ENST00000359759 EDC4Q6P2E9 1401 aaKnown RBP17.15■□□□□ 0.34
COL18A1-203ENST00000359759 ATP8B3O60423 1300 aa17.15■□□□□ 0.34
COL18A1-203ENST00000359759 A2MP01023 1474 aa17.15■□□□□ 0.34
COL18A1-203ENST00000359759 AFF4Q9UHB7 1163 aaKnown RBP17.15■□□□□ 0.34
COL18A1-203ENST00000359759 LARGE1O95461 756 aa17.14■□□□□ 0.34
COL18A1-203ENST00000359759 SKOR1P84550 965 aa17.14■□□□□ 0.34
COL18A1-203ENST00000359759 MKRN3Q13064 507 aaKnown RBP17.14■□□□□ 0.34
COL18A1-203ENST00000359759 ARL13BQ3SXY8 428 aa17.14■□□□□ 0.34
COL18A1-203ENST00000359759 MAP4K1Q92918 833 aa17.14■□□□□ 0.34
COL18A1-203ENST00000359759 PLEKHG3A1L390 1219 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 IPO5O00410 1097 aaKnown RBP17.14■□□□□ 0.33
COL18A1-203ENST00000359759 MFAP3LO75121 409 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 HAUS5O94927 633 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 HNRNPCP07910 306 aaKnown RBP eCLIP17.14■□□□□ 0.336e-7■□□□□ 8.9
COL18A1-203ENST00000359759 PMS2P54278 862 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 ARL4CP56559 192 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 NKX1-1Q15270 411 aaPredicted RBP17.14■□□□□ 0.33
COL18A1-203ENST00000359759 PARP9Q8IXQ6 854 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 B4GALNT2Q8NHY0 566 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 EPC1Q9H2F5 836 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 KIF24Q5T7B8 1368 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 ZNF804BA4D1E1 1349 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 CYP2D7A0A087X1C5 515 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 FAM95CA0A1B0GW59 222 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 LRRC8EQ6NSJ5 796 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 ARHGAP27Q6ZUM4 889 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 DYNLL2Q96FJ2 89 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 IFT43Q96FT9 208 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 KRT37O76014 449 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 VCAM1P19320 739 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 MAP3K7CLP57077 242 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 DSTYKQ6XUX3 929 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 AP5M1Q9H0R1 490 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 TRIM49BA6NDI0 452 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 SERPINI2O75830 405 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 CARSP49589 748 aaKnown RBP17.14■□□□□ 0.33
COL18A1-203ENST00000359759 MORF4L2Q15014 288 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 ALKBH5Q6P6C2 394 aaKnown RBP17.14■□□□□ 0.33
COL18A1-203ENST00000359759 BTBD6Q96KE9 485 aa17.14■□□□□ 0.33
COL18A1-203ENST00000359759 PJA2O43164 708 aa17.13■□□□□ 0.33
COL18A1-203ENST00000359759 CASP1P29466 404 aa17.13■□□□□ 0.33
COL18A1-203ENST00000359759 AARSP49588 968 aaKnown RBP eCLIP17.13■□□□□ 0.333e-6■■■■■ 35.7
COL18A1-203ENST00000359759 CHCHD3Q9NX63 227 aaKnown RBP17.13■□□□□ 0.33
COL18A1-203ENST00000359759 ZMYM1Q5SVZ6 1142 aa17.13■□□□□ 0.33
COL18A1-203ENST00000359759 ZCWPW1Q9H0M4 648 aa17.13■□□□□ 0.33
COL18A1-203ENST00000359759 SEPT2Q15019 361 aa17.13■□□□□ 0.33
COL18A1-203ENST00000359759 TERF2Q15554 542 aa17.13■□□□□ 0.33
COL18A1-203ENST00000359759 NBPF10Q6P3W6 841 aaKnown RBP17.13■□□□□ 0.33
COL18A1-203ENST00000359759 ADAM21Q9UKJ8 722 aa17.13■□□□□ 0.33
COL18A1-203ENST00000359759 YEATS2Q9ULM3 1422 aa17.13■□□□□ 0.33
COL18A1-203ENST00000359759 PEX3P56589 373 aa17.13■□□□□ 0.33
COL18A1-203ENST00000359759 LCORLQ8N3X6 602 aa17.13■□□□□ 0.33
COL18A1-203ENST00000359759 CCNE1P24864 410 aa17.13■□□□□ 0.33
COL18A1-203ENST00000359759 CYTH1Q15438 398 aa17.13■□□□□ 0.33
COL18A1-203ENST00000359759 CDCA7Q9BWT1 371 aaPredicted RBP17.13■□□□□ 0.33
COL18A1-203ENST00000359759 DBNLQ9UJU6 430 aaKnown RBP17.13■□□□□ 0.33
COL18A1-203ENST00000359759 PAPOLAP51003 745 aaKnown RBP17.12■□□□□ 0.33
COL18A1-203ENST00000359759 ATXN7L3BQ96GX2 97 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 LRRC37BQ96QE4 947 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 ESYT3A0FGR9 886 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 SYDE2Q5VT97 1194 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 PIGOQ8TEQ8 1089 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 ALG13Q9NP73 1137 aaKnown RBP17.12■□□□□ 0.33
COL18A1-203ENST00000359759 FBXL5Q9UKA1 691 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 TRIM33Q9UPN9 1127 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 MRPS15P82914 257 aaKnown RBP17.12■□□□□ 0.33
COL18A1-203ENST00000359759 RFWD2Q8NHY2 731 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 FAM81BQ96LP2 452 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 WDR11Q9BZH6 1224 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 CDV3Q9UKY7 258 aaKnown RBP17.12■□□□□ 0.33
COL18A1-203ENST00000359759 SLC9A5Q14940 896 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 PPM1NQ8N819 430 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 DNAJC12Q9UKB3 198 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 GDAQ9Y2T3 454 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 SRPRBQ9Y5M8 271 aaKnown RBP17.12■□□□□ 0.33
COL18A1-203ENST00000359759 ARHGEF10O15013 1369 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 ICE2Q659A1 982 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 NLRP14Q86W24 1093 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 POLIQ9UNA4 740 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 USP17L3A6NCW0 530 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 USP17L4A6NCW7 530 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 KPNA7A9QM74 516 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 PODXLO00592 558 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 IFNA8P32881 189 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 NFRKBQ6P4R8 1299 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 EMBQ6PCB8 327 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 USP17L1Q7RTZ2 530 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 VPS39Q96JC1 886 aa17.12■□□□□ 0.33
COL18A1-203ENST00000359759 BICRAQ9NZM4 1560 aa17.11■□□□□ 0.33
COL18A1-203ENST00000359759 GMNCA6NCL1 334 aa17.11■□□□□ 0.33
COL18A1-203ENST00000359759 USP17L8P0C7I0 530 aa17.11■□□□□ 0.33
COL18A1-203ENST00000359759 ATG3Q9NT62 314 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms