RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 BORCS6Q96GS4 357 aa17.12■□□□□ 0.33
TSC22D3-201ENST00000315660 KIAA1683Q9H0B3 1180 aa17.12■□□□□ 0.33
TSC22D3-201ENST00000315660 ACBD3Q9H3P7 528 aa17.12■□□□□ 0.33
TSC22D3-201ENST00000315660 FBXL5Q9UKA1 691 aa17.12■□□□□ 0.33
TSC22D3-201ENST00000315660 A0A087X0T9 212 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 GTPBP10A4D1E9 387 aaKnown RBP17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 DDX39AO00148 427 aaKnown RBP17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 BUB1O43683 1085 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 FAM228BP0C875 321 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 GUCY2CP25092 1073 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 ODR4Q5SWX8 454 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 FAM186BQ8IYM0 893 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 FAM71BQ8TC56 605 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 COG1Q8WTW3 980 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 MKNK1Q9BUB5 465 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 TAOK3Q9H2K8 898 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 KCNH7Q9NS40 1196 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 FAN1Q9Y2M0 1017 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 N4BP1O75113 896 aaKnown RBP17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 EGFRP00533 1210 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 PAFAH1B1P43034 410 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 GHRHRQ02643 423 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 NAB2Q15742 525 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 KIAA0753Q2KHM9 967 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 NFRKBQ6P4R8 1299 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 NIPA1Q7RTP0 329 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 ZNF572Q7Z3I7 529 aaPredicted RBP17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 MIER3Q7Z3K6 550 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 IRF2BP2Q7Z5L9 587 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 GINM1Q9NU53 330 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 PKD2L1Q9P0L9 805 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 GCNT4Q9P109 453 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 FRMD4BQ9Y2L6 1034 aa17.11■□□□□ 0.33
TSC22D3-201ENST00000315660 IVLP07476 585 aa17.1■□□□□ 0.33
TSC22D3-201ENST00000315660 ALAS1P13196 640 aa17.1■□□□□ 0.33
TSC22D3-201ENST00000315660 ZNF280AP59817 542 aaPredicted RBP17.1■□□□□ 0.33
TSC22D3-201ENST00000315660 DGKZQ13574 1117 aa17.1■□□□□ 0.33
TSC22D3-201ENST00000315660 KSR1Q8IVT5 923 aa17.1■□□□□ 0.33
TSC22D3-201ENST00000315660 CPXCR1Q8N123 301 aa17.1■□□□□ 0.33
TSC22D3-201ENST00000315660 CCDC102AQ96A19 550 aa17.1■□□□□ 0.33
TSC22D3-201ENST00000315660 SIX2Q9NPC8 291 aa17.1■□□□□ 0.33
TSC22D3-201ENST00000315660 MYH10P35580 1976 aa17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 NCK2O43639 380 aa17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 ANXA13P27216 316 aa17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 TGFB2P61812 414 aa17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 PTK2Q05397 1052 aa17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 C2orf54Q08AI8 447 aa17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 COG2Q14746 738 aa17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 DALRD3Q5D0E6 543 aaKnown RBP17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 VPS36Q86VN1 386 aa17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 TLR10Q9BXR5 811 aa17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 SLC38A10Q9HBR0 1119 aa17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 RAVER2Q9HCJ3 691 aaKnown RBP17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 MED4Q9NPJ6 270 aa17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 MAP3K20Q9NYL2 800 aaKnown RBP17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 CTDP1Q9Y5B0 961 aaPredicted RBP17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 DHX15O43143 795 aaKnown RBP17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 P4HBP07237 508 aaKnown RBP17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 KLRC1P26715 233 aa17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 TKFCQ3LXA3 575 aa17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 ZNF571Q7Z3V5 609 aaPredicted RBP17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 MMGT1Q8N4V1 131 aa17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 RBM46Q8TBY0 533 aaKnown RBP17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 SYTL5Q8TDW5 730 aaPredicted RBP17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 RNF14Q9UBS8 474 aa17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 UBIAD1Q9Y5Z9 338 aa17.09■□□□□ 0.33
TSC22D3-201ENST00000315660 HIP1RO75146 1068 aa17.08■□□□□ 0.33
TSC22D3-201ENST00000315660 FLOT1O75955 427 aa17.08■□□□□ 0.33
TSC22D3-201ENST00000315660 MAPK7Q13164 816 aa17.08■□□□□ 0.33
TSC22D3-201ENST00000315660 ITGB3BPQ13352 177 aaPredicted RBP17.08■□□□□ 0.33
TSC22D3-201ENST00000315660 PCNX4Q63HM2 1172 aa17.08■□□□□ 0.33
TSC22D3-201ENST00000315660 DAW1Q8N136 415 aa17.08■□□□□ 0.33
TSC22D3-201ENST00000315660 SPATA4Q8NEY3 305 aa17.08■□□□□ 0.33
TSC22D3-201ENST00000315660 PSMB7Q99436 277 aa17.08■□□□□ 0.33
TSC22D3-201ENST00000315660 PACSIN1Q9BY11 444 aa17.08■□□□□ 0.33
TSC22D3-201ENST00000315660 AGO4Q9HCK5 861 aaKnown RBP17.08■□□□□ 0.33
TSC22D3-201ENST00000315660 AGPAT3Q9NRZ7 376 aa17.08■□□□□ 0.33
TSC22D3-201ENST00000315660 HOMER2Q9NSB8 354 aa17.08■□□□□ 0.33
TSC22D3-201ENST00000315660 DMAC2Q9NW81 257 aa17.08■□□□□ 0.33
TSC22D3-201ENST00000315660 AJAP1Q9UKB5 411 aaPredicted RBP17.08■□□□□ 0.33
TSC22D3-201ENST00000315660 PNMA2Q9UL42 364 aa17.08■□□□□ 0.33
TSC22D3-201ENST00000315660 MYO1CO00159 1063 aa17.08■□□□□ 0.32
TSC22D3-201ENST00000315660 CTNND1O60716 968 aaKnown RBP17.08■□□□□ 0.32
TSC22D3-201ENST00000315660 PALMO75781 387 aa17.08■□□□□ 0.32
TSC22D3-201ENST00000315660 CXCR5P32302 372 aa17.08■□□□□ 0.32
TSC22D3-201ENST00000315660 PRKCIP41743 596 aa17.08■□□□□ 0.32
TSC22D3-201ENST00000315660 JAM2P57087 298 aa17.08■□□□□ 0.32
TSC22D3-201ENST00000315660 MRPS9P82933 396 aaKnown RBP17.08■□□□□ 0.32
TSC22D3-201ENST00000315660 SYCP3Q8IZU3 236 aa17.08■□□□□ 0.32
TSC22D3-201ENST00000315660 SAMD3Q8N6K7 520 aa17.08■□□□□ 0.32
TSC22D3-201ENST00000315660 RUBCNQ92622 972 aa17.08■□□□□ 0.32
TSC22D3-201ENST00000315660 RASSF4Q9H2L5 321 aa17.08■□□□□ 0.32
TSC22D3-201ENST00000315660 LARSQ9P2J5 1176 aaKnown RBP17.08■□□□□ 0.32
TSC22D3-201ENST00000315660 SAMM50Q9Y512 469 aa17.08■□□□□ 0.32
TSC22D3-201ENST00000315660 PCDHGC5Q9Y5F6 944 aa17.08■□□□□ 0.32
TSC22D3-201ENST00000315660 RPS6KA5O75582 802 aa17.07■□□□□ 0.32
TSC22D3-201ENST00000315660 RPS12P25398 132 aaKnown RBP17.07■□□□□ 0.32
TSC22D3-201ENST00000315660 MTMR1Q13613 665 aa17.07■□□□□ 0.32
TSC22D3-201ENST00000315660 IFI16Q16666 785 aaKnown RBP17.07■□□□□ 0.32
TSC22D3-201ENST00000315660 CFAP221Q4G0U5 840 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms