RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 MTMR1Q13613 665 aa18.55■□□□□ 0.56
GABRB3-202ENST00000311550 THOC1Q96FV9 657 aaKnown RBP18.55■□□□□ 0.56
GABRB3-202ENST00000311550 EIF2AK1Q9BQI3 630 aaKnown RBP18.55■□□□□ 0.56
GABRB3-202ENST00000311550 MTMR4Q9NYA4 1195 aa18.55■□□□□ 0.56
GABRB3-202ENST00000311550 MMEP08473 750 aa18.55■□□□□ 0.56
GABRB3-202ENST00000311550 TPD52P55327 224 aaPredicted RBP18.55■□□□□ 0.56
GABRB3-202ENST00000311550 CCDC125Q86Z20 511 aa18.55■□□□□ 0.56
GABRB3-202ENST00000311550 PPP4R1Q8TF05 950 aa18.55■□□□□ 0.56
GABRB3-202ENST00000311550 C7orf25Q9BPX7 421 aa18.55■□□□□ 0.56
GABRB3-202ENST00000311550 ZNF233A6NK53 670 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 GPC5P78333 572 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 C6orf118Q5T5N4 469 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 NUGGCQ68CJ6 796 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 RNF169Q8NCN4 708 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 CFAP61Q8NHU2 1237 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 ANKRD36BP1Q96IX9 119 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 JPH2Q9BR39 696 aaPredicted RBP18.54■□□□□ 0.56
GABRB3-202ENST00000311550 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.54■□□□□ 0.56
GABRB3-202ENST00000311550 INTS2Q9H0H0 1204 aaKnown RBP18.54■□□□□ 0.56
GABRB3-202ENST00000311550 TROAPQ12815 778 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 ALCAMQ13740 583 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 ARHGEF28Q8N1W1 1705 aaKnown RBP18.54■□□□□ 0.56
GABRB3-202ENST00000311550 VCX3BQ9H321 246 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 ACTN1P12814 892 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 KLRK1P26718 216 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 NMT1P30419 496 aaKnown RBP18.54■□□□□ 0.56
GABRB3-202ENST00000311550 HDLBPQ00341 1268 aaKnown RBP18.54■□□□□ 0.56
GABRB3-202ENST00000311550 RNF207Q6ZRF8 634 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 GIMAP8Q8ND71 665 aaPredicted RBP18.54■□□□□ 0.56
GABRB3-202ENST00000311550 RAVER2Q9HCJ3 691 aaKnown RBP18.54■□□□□ 0.56
GABRB3-202ENST00000311550 KIF20BQ96Q89 1820 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 MAGEA9P43362 315 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 ITPK1Q13572 414 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 ARMC9Q7Z3E5 817 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 TADA2BQ86TJ2 420 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 CCT6BQ92526 530 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 HPSEQ9Y251 543 aa18.54■□□□□ 0.56
GABRB3-202ENST00000311550 PSAPP07602 524 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 ADCY2Q08462 1091 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 RINT1Q6NUQ1 792 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 MAP7D3Q8IWC1 876 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 TAF1DQ9H5J8 278 aaPredicted RBP18.53■□□□□ 0.56
GABRB3-202ENST00000311550 AMACRQ9UHK6 382 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 SYNGAP1Q96PV0 1343 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 K7ERI5 159 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 ECE2O60344 883 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 RASA1P20936 1047 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 SLC12A2P55011 1212 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 PDIA5Q14554 519 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 MLXIPLQ9NP71 852 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 DAGLAQ9Y4D2 1042 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 OVOS2A0A0G2JMS6 1433 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 FTLP02792 175 aaPredicted RBP18.53■□□□□ 0.56
GABRB3-202ENST00000311550 SRGAP2CP0DJJ0 459 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 MSH2P43246 934 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 MSTO1Q9BUK6 570 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 VCXQ9H320 206 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 TARSL2A2RTX5 802 aaKnown RBP18.53■□□□□ 0.56
GABRB3-202ENST00000311550 RCN2Q14257 317 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 BBS9Q3SYG4 887 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.53■□□□□ 0.56
GABRB3-202ENST00000311550 CFAP57Q96MR6 1250 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 MIF4GDA9UHW6 222 aaKnown RBP18.53■□□□□ 0.56
GABRB3-202ENST00000311550 RMDN3Q96TC7 470 aa18.53■□□□□ 0.56
GABRB3-202ENST00000311550 PODXLO00592 558 aa18.52■□□□□ 0.56
GABRB3-202ENST00000311550 IFRD2Q12894 506 aaPredicted RBP18.52■□□□□ 0.56
GABRB3-202ENST00000311550 SAAL1Q96ER3 474 aa18.52■□□□□ 0.56
GABRB3-202ENST00000311550 LXNQ9BS40 222 aa18.52■□□□□ 0.56
GABRB3-202ENST00000311550 AKT3Q9Y243 479 aa18.52■□□□□ 0.56
GABRB3-202ENST00000311550 PLEKHG2Q9H7P9 1386 aa18.52■□□□□ 0.56
GABRB3-202ENST00000311550 PXDNQ92626 1479 aa18.52■□□□□ 0.56
GABRB3-202ENST00000311550 VWDEQ8N2E2 1590 aa18.52■□□□□ 0.56
GABRB3-202ENST00000311550 A6NJR5 290 aa18.52■□□□□ 0.56
GABRB3-202ENST00000311550 SEMA3FQ13275 785 aa18.52■□□□□ 0.56
GABRB3-202ENST00000311550 SH2D3CQ8N5H7 860 aa18.52■□□□□ 0.56
GABRB3-202ENST00000311550 GRID2IPA4D2P6 1211 aa18.52■□□□□ 0.56
GABRB3-202ENST00000311550 MARK3P27448 753 aa18.52■□□□□ 0.56
GABRB3-202ENST00000311550 USP11P51784 963 aa18.52■□□□□ 0.56
GABRB3-202ENST00000311550 VAMP7P51809 220 aa18.52■□□□□ 0.56
GABRB3-202ENST00000311550 TFDP1Q14186 410 aa18.52■□□□□ 0.56
GABRB3-202ENST00000311550 EAPPQ56P03 285 aaPredicted RBP18.52■□□□□ 0.56
GABRB3-202ENST00000311550 PODNQ7Z5L7 613 aa18.52■□□□□ 0.56
GABRB3-202ENST00000311550 TBC1D1Q86TI0 1168 aaPredicted RBP18.52■□□□□ 0.56
GABRB3-202ENST00000311550 MCF2LO15068 1137 aa18.52■□□□□ 0.55
GABRB3-202ENST00000311550 ZNF543Q08ER8 600 aa18.52■□□□□ 0.55
GABRB3-202ENST00000311550 NXNQ6DKJ4 435 aa18.52■□□□□ 0.55
GABRB3-202ENST00000311550 SCYL3Q8IZE3 742 aa18.52■□□□□ 0.55
GABRB3-202ENST00000311550 CDHR1Q96JP9 859 aa18.52■□□□□ 0.55
GABRB3-202ENST00000311550 FAM81BQ96LP2 452 aa18.52■□□□□ 0.55
GABRB3-202ENST00000311550 MIS12Q9H081 205 aa18.52■□□□□ 0.55
GABRB3-202ENST00000311550 ADAM22Q9P0K1 906 aa18.52■□□□□ 0.55
GABRB3-202ENST00000311550 ASNSP08243 561 aa18.51■□□□□ 0.55
GABRB3-202ENST00000311550 CA4P22748 312 aa18.51■□□□□ 0.55
GABRB3-202ENST00000311550 SH2D3AQ9BRG2 576 aa18.51■□□□□ 0.55
GABRB3-202ENST00000311550 ZWILCHQ9H900 591 aa18.51■□□□□ 0.55
GABRB3-202ENST00000311550 CYP2C19P33261 490 aa18.51■□□□□ 0.55
GABRB3-202ENST00000311550 KCTD6Q8NC69 237 aa18.51■□□□□ 0.55
GABRB3-202ENST00000311550 RIOK1Q9BRS2 568 aaKnown RBP18.51■□□□□ 0.55
GABRB3-202ENST00000311550 FAM213AQ9BRX8 229 aa18.51■□□□□ 0.55
GABRB3-202ENST00000311550 FBXL5Q9UKA1 691 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms