RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 USP17L15C9J2P7 530 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 USP17L13C9JLJ4 530 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 USP17L11C9JVI0 530 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 USP17L18D6R9N7 530 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 USP17L22D6RA61 530 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 USP17L17D6RBQ6 530 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 USP17L19D6RCP7 530 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 USP17L20D6RJB6 530 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 CA4P22748 312 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 USP17L24Q0WX57 530 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 ANKRD40Q6AI12 368 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 PPP1R2P3Q6NXS1 205 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 USP17L6PQ6QN14 398 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 ANKRD36BP1Q96IX9 119 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 SCYL1Q96KG9 808 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 USP17L10C9JJH3 530 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 NYAP1Q6ZVC0 841 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 SRBD1Q8N5C6 995 aaKnown RBP17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 N4BP2L2Q92802 583 aaPredicted RBP17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 TPX2Q9ULW0 747 aaKnown RBP17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 MCF2LO15068 1137 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 SAT1P21673 171 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 DPYDQ12882 1025 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 SEMA3FQ13275 785 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 MAP7Q14244 749 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 CEP95Q96GE4 821 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 A6NJR5 290 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 ALCAMQ13740 583 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 TAF11Q15544 211 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 RAD9BQ6WBX8 426 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 TRIM42Q8IWZ5 723 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 ENGASEQ8NFI3 743 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 NLRP7Q8WX94 980 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 Q9H521 79 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 TAF1DQ9H5J8 278 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 GARSP41250 739 aaKnown RBP17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 ORC2Q13416 577 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 ZNF449Q6P9G9 518 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 WDR91A4D1P6 747 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 GMNCA6NCL1 334 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 OATP04181 439 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 SPP2Q13103 211 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 METTL23Q86XA0 190 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 POLD4Q9HCU8 107 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 PCDHA6Q9UN73 950 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 PCDHA8Q9Y5H6 950 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 RPS6KA2Q15349 733 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 PDXDC1Q6P996 788 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 USP49Q70CQ1 688 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 RSRC2Q7L4I2 434 aaKnown RBP17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.24■□□□□ 0.352e-6■■□□□ 12.3
ARHGEF28-201ENST00000296794 LRRC1Q9BTT6 524 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 SNX12Q9UMY4 172 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 ZNF185O15231 689 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 ORC4O43929 436 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 PPP2R2AP63151 447 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 ATP6V1G3Q96LB4 118 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 PHF20Q9BVI0 1012 aa17.24■□□□□ 0.35
ARHGEF28-201ENST00000296794 PTPRMP28827 1452 aa17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 ITIH6Q6UXX5 1313 aa17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 HDLBPQ00341 1268 aaKnown RBP17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 KNOP1Q1ED39 458 aaKnown RBP17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 BEND6Q5SZJ8 279 aaPredicted RBP17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 NLRP14Q86W24 1093 aa17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 UTYO14607 1347 aa17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 SMIM24O75264 130 aa17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 ZNF211Q13398 564 aaPredicted RBP17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 BBS9Q3SYG4 887 aa17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 STAG2Q8N3U4 1231 aa17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 CALN1Q9BXU9 219 aa17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 TDP2O95551 362 aa17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 CPP00450 1065 aa17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 SYNJ2BP-COX16A0A087WUM0 186 aa17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 A0A0G2JLW4 131 aa17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 CHUKO15111 745 aa17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 PLS3P13797 630 aa17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 ADSSL1Q8N142 457 aa17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 BANK1Q8NDB2 785 aa17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 COX16Q9P0S2 106 aa17.23■□□□□ 0.35
ARHGEF28-201ENST00000296794 GPC5P78333 572 aa17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 GPSM2P81274 684 aa17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 GBP7Q8N8V2 638 aaPredicted RBP17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 AFG3L2Q9Y4W6 797 aa17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 TFAMQ00059 246 aaKnown RBP17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 R3HDM1Q15032 1099 aaKnown RBP17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 RMDN3Q96TC7 470 aa17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 PITPNM3Q9BZ71 974 aa17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 ANAPC7Q9UJX3 599 aa17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 CD58P19256 250 aa17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 PMS2P54278 862 aa17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 PEX3P56589 373 aa17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 STXBP2Q15833 593 aa17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 DARS2Q6PI48 645 aaKnown RBP17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 TRIM9Q9C026 710 aa17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 CNOT8Q9UFF9 292 aaKnown RBP17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 FEM1BQ9UK73 627 aa17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 POTEFA5A3E0 1075 aa17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 POTEIP0CG38 1075 aa17.22■□□□□ 0.35
ARHGEF28-201ENST00000296794 DBN1Q16643 649 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms