RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 AP2B1P63010 937 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 KRT24Q2M2I5 525 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 CDKL3Q8IVW4 592 aaPredicted RBP15.81■□□□□ 0.12
SEC16A-202ENST00000290037 CLEC11AQ9Y240 323 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 ROBO2Q9HCK4 1378 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 THOC5Q13769 683 aaKnown RBP15.81■□□□□ 0.12
SEC16A-202ENST00000290037 CMTM5Q96DZ9 223 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 ACAP3Q96P50 834 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 BEGAINQ9BUH8 593 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 USP21Q9UK80 565 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 PITPNM2Q9BZ72 1349 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 ABCB4P21439 1286 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 PNMA6AP0CW24 399 aaPredicted RBP15.81■□□□□ 0.12
SEC16A-202ENST00000290037 BYSLQ13895 437 aaKnown RBP15.81■□□□□ 0.12
SEC16A-202ENST00000290037 NELFCDQ8IXH7 590 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 PSPC1Q8WXF1 523 aaKnown RBP15.81■□□□□ 0.12
SEC16A-202ENST00000290037 SGSM3Q96HU1 749 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 STRBPQ96SI9 672 aaKnown RBP15.81■□□□□ 0.12
SEC16A-202ENST00000290037 APOBEC2Q9Y235 224 aaKnown RBP15.81■□□□□ 0.12
SEC16A-202ENST00000290037 ESYT2A0FGR8 921 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 LRRIQ4A6NIV6 560 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 HSPA13P48723 471 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 TRMT44Q8IYL2 757 aaKnown RBP15.81■□□□□ 0.12
SEC16A-202ENST00000290037 SLC39A2Q9NP94 309 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 MPP6Q9NZW5 540 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 MAPK8IP1Q9UQF2 711 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 NCKAP5LQ9HCH0 1330 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 IQCB1Q15051 598 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 PYROXD1Q8WU10 500 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 RFFLQ8WZ73 363 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 PCDHB8Q9UN66 801 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 PIK3C2BO00750 1634 aa15.81■□□□□ 0.12
SEC16A-202ENST00000290037 GUCY2FP51841 1108 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 PRELPP51888 382 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 CAPN11Q9UMQ6 739 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 RIMBP2O15034 1052 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 EFCAB14O75071 495 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 RSBN1LQ6PCB5 846 aaPredicted RBP15.8■□□□□ 0.12
SEC16A-202ENST00000290037 CD163L1Q9NR16 1453 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 ABCE1P61221 599 aaKnown RBP15.8■□□□□ 0.12
SEC16A-202ENST00000290037 MED21Q13503 144 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 SNF8Q96H20 258 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 SIKE1Q9BRV8 207 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 SLC38A10Q9HBR0 1119 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 RABL6Q3YEC7 729 aaPredicted RBP15.8■□□□□ 0.12
SEC16A-202ENST00000290037 AGBL2Q5U5Z8 902 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 GCNAQ96QF7 691 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 TSSK1BQ9BXA7 367 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 MROH1Q8NDA8 1641 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 SBK1Q52WX2 424 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 MOXD1Q6UVY6 613 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 SIX6OS1Q8N1H7 587 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 MORC2Q9Y6X9 1032 aaPredicted RBP15.8■□□□□ 0.12
SEC16A-202ENST00000290037 ZRANB2O95218 330 aaKnown RBP eCLIP15.8■□□□□ 0.123e-7■■□□□ 14
SEC16A-202ENST00000290037 CPA1P15085 419 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 RANBP1P43487 201 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 FBXL16Q8N461 479 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 UTP6Q9NYH9 597 aaKnown RBP15.8■□□□□ 0.12
SEC16A-202ENST00000290037 AGTP01019 485 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 KRT1P04264 644 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 SERPINB9P50453 376 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 PTPN12Q05209 780 aaKnown RBP15.8■□□□□ 0.12
SEC16A-202ENST00000290037 SCYL1Q96KG9 808 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 UBN1Q9NPG3 1134 aa15.8■□□□□ 0.12
SEC16A-202ENST00000290037 A0A1B0GW55 424 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 DUX4L2P0CJ85 424 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 DUX4L3P0CJ86 424 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 DUX4L4P0CJ87 422 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 DUX4L5P0CJ88 424 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 DUX4L6P0CJ89 424 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 DUX4L7P0CJ90 424 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 TRAIPQ9BWF2 469 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 EPC1Q9H2F5 836 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 DUX4Q9UBX2 424 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 SPAG7O75391 227 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 GTF2IP78347 998 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 ST7Q9NRC1 585 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 PRDM1O75626 825 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 ART3Q13508 389 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 RFX6Q8HWS3 928 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 PDCD7Q8N8D1 485 aaKnown RBP15.79■□□□□ 0.12
SEC16A-202ENST00000290037 LRRC4Q9HBW1 653 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 SYNPO2Q9UMS6 1093 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 ZBED1O96006 694 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 NBPF3Q9H094 633 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 NWD1Q149M9 1564 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 M0R2C6 588 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 JARID2Q92833 1246 aaPredicted RBP15.79■□□□□ 0.12
SEC16A-202ENST00000290037 PIK3R2O00459 728 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 PYGLP06737 847 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 THEM5Q8N1Q8 247 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 HARSP12081 509 aaKnown RBP15.79■□□□□ 0.12
SEC16A-202ENST00000290037 ANO3Q9BYT9 981 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 MAF1Q9H063 256 aa15.79■□□□□ 0.12
SEC16A-202ENST00000290037 EIF4A3P38919 411 aaKnown RBP15.78■□□□□ 0.12
SEC16A-202ENST00000290037 RAD54LQ92698 747 aa15.78■□□□□ 0.12
SEC16A-202ENST00000290037 INPP1P49441 399 aa15.78■□□□□ 0.12
SEC16A-202ENST00000290037 SNX1Q13596 522 aa15.78■□□□□ 0.12
SEC16A-202ENST00000290037 KNOP1Q1ED39 458 aaKnown RBP15.78■□□□□ 0.12
SEC16A-202ENST00000290037 RHOT1Q8IXI2 618 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms