RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 ZNRF3Q9ULT6 936 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 YDJCA8MPS7 323 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 FAM13AO94988 1023 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 FERP16591 822 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 FAM160B2Q86V87 743 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 RBM46Q8TBY0 533 aaKnown RBP27.38■■□□□ 1.97
ROM1-201ENST00000278833 CHURC1Q8WUH1 139 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 FIZ1Q96SL8 496 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 PACSIN1Q9BY11 444 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.38■■□□□ 1.97
ROM1-201ENST00000278833 TMOD2Q9NZR1 351 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 MRPL11Q9Y3B7 192 aaKnown RBP27.38■■□□□ 1.97
ROM1-201ENST00000278833 VIL1P09327 827 aaKnown RBP27.37■■□□□ 1.97
ROM1-201ENST00000278833 PSMC2P35998 433 aaKnown RBP27.37■■□□□ 1.97
ROM1-201ENST00000278833 MYBPC2Q14324 1141 aa27.37■■□□□ 1.97
ROM1-201ENST00000278833 VPS36Q86VN1 386 aa27.37■■□□□ 1.97
ROM1-201ENST00000278833 TMEM174Q8WUU8 243 aa27.37■■□□□ 1.97
ROM1-201ENST00000278833 FAM151AQ8WW52 585 aa27.37■■□□□ 1.97
ROM1-201ENST00000278833 PARVGQ9HBI0 331 aa27.37■■□□□ 1.97
ROM1-201ENST00000278833 DMAC2Q9NW81 257 aa27.37■■□□□ 1.97
ROM1-201ENST00000278833 EHD2Q9NZN4 543 aa27.37■■□□□ 1.97
ROM1-201ENST00000278833 PPP1R12BO60237 982 aaPredicted RBP27.36■■□□□ 1.97
ROM1-201ENST00000278833 OPA1O60313 960 aa27.36■■□□□ 1.97
ROM1-201ENST00000278833 ZBTB48P10074 688 aaPredicted RBP27.36■■□□□ 1.97
ROM1-201ENST00000278833 PAK2Q13177 524 aa27.36■■□□□ 1.97
ROM1-201ENST00000278833 SLFN11Q7Z7L1 901 aa27.36■■□□□ 1.97
ROM1-201ENST00000278833 GPIHBP1Q8IV16 184 aa27.36■■□□□ 1.97
ROM1-201ENST00000278833 CALR3Q96L12 384 aaKnown RBP27.36■■□□□ 1.97
ROM1-201ENST00000278833 SMARCAL1Q9NZC9 954 aa27.36■■□□□ 1.97
ROM1-201ENST00000278833 RGL1Q9NZL6 768 aa27.36■■□□□ 1.97
ROM1-201ENST00000278833 GCNT4Q9P109 453 aa27.36■■□□□ 1.97
ROM1-201ENST00000278833 SHTN1A0MZ66 631 aa27.36■■□□□ 1.97
ROM1-201ENST00000278833 FTCDO95954 541 aa27.36■■□□□ 1.97
ROM1-201ENST00000278833 GUCY2CP25092 1073 aa27.36■■□□□ 1.97
ROM1-201ENST00000278833 TNNC1P63316 161 aa27.36■■□□□ 1.97
ROM1-201ENST00000278833 FKBP1CQ5VVH2 108 aa27.36■■□□□ 1.97
ROM1-201ENST00000278833 USP38Q8NB14 1042 aa27.36■■□□□ 1.97
ROM1-201ENST00000278833 ACTRT1Q8TDG2 376 aa27.36■■□□□ 1.97
ROM1-201ENST00000278833 NACC1Q96RE7 527 aa27.36■■□□□ 1.97
ROM1-201ENST00000278833 PSMB7Q99436 277 aa27.36■■□□□ 1.97
ROM1-201ENST00000278833 ZBTB21Q9ULJ3 1066 aa27.36■■□□□ 1.97
ROM1-201ENST00000278833 SMCHD1A6NHR9 2005 aa27.35■■□□□ 1.97
ROM1-201ENST00000278833 SPDYE2BA6NHP3 402 aa27.35■■□□□ 1.97
ROM1-201ENST00000278833 BHMG1C9JSJ3 638 aaPredicted RBP27.35■■□□□ 1.97
ROM1-201ENST00000278833 TBC1D12O60347 775 aa27.35■■□□□ 1.97
ROM1-201ENST00000278833 PHACTR2O75167 634 aa27.35■■□□□ 1.97
ROM1-201ENST00000278833 KIF4AO95239 1232 aa27.35■■□□□ 1.97
ROM1-201ENST00000278833 SPDYE6P0CI01 402 aa27.35■■□□□ 1.97
ROM1-201ENST00000278833 CASP4P49662 377 aa27.35■■□□□ 1.97
ROM1-201ENST00000278833 PPP2R5AQ15172 486 aa27.35■■□□□ 1.97
ROM1-201ENST00000278833 CEP55Q53EZ4 464 aa27.35■■□□□ 1.97
ROM1-201ENST00000278833 DCAF17Q5H9S7 520 aaPredicted RBP27.35■■□□□ 1.97
ROM1-201ENST00000278833 ALKBH5Q6P6C2 394 aaKnown RBP27.35■■□□□ 1.97
ROM1-201ENST00000278833 SLC9A9Q8IVB4 645 aa27.35■■□□□ 1.97
ROM1-201ENST00000278833 DYDC2Q96IM9 177 aa27.35■■□□□ 1.97
ROM1-201ENST00000278833 MS4A14Q96JA4 679 aa27.35■■□□□ 1.97
ROM1-201ENST00000278833 ARID5AQ03989 594 aa27.34■■□□□ 1.97
ROM1-201ENST00000278833 PPFIA1Q13136 1202 aa27.34■■□□□ 1.97
ROM1-201ENST00000278833 FAM186BQ8IYM0 893 aa27.34■■□□□ 1.97
ROM1-201ENST00000278833 TAF4BQ92750 862 aa27.34■■□□□ 1.97
ROM1-201ENST00000278833 STRA6Q9BX79 667 aa27.34■■□□□ 1.97
ROM1-201ENST00000278833 ZNF541Q9H0D2 1346 aa27.34■■□□□ 1.97
ROM1-201ENST00000278833 RPS6KA1Q15418 735 aa27.34■■□□□ 1.97
ROM1-201ENST00000278833 KIAA1755Q5JYT7 1200 aa27.34■■□□□ 1.97
ROM1-201ENST00000278833 FAM76AQ8TAV0 307 aa27.34■■□□□ 1.97
ROM1-201ENST00000278833 VCPKMTQ9H867 229 aa27.34■■□□□ 1.97
ROM1-201ENST00000278833 NCANO14594 1321 aa27.33■■□□□ 1.97
ROM1-201ENST00000278833 TAL1P17542 331 aaPredicted RBP27.33■■□□□ 1.97
ROM1-201ENST00000278833 RFX1P22670 979 aa27.33■■□□□ 1.97
ROM1-201ENST00000278833 STAT1P42224 750 aa27.33■■□□□ 1.97
ROM1-201ENST00000278833 ECE1P42892 770 aa27.33■■□□□ 1.97
ROM1-201ENST00000278833 SLC7A5Q01650 507 aa27.33■■□□□ 1.97
ROM1-201ENST00000278833 CTTNQ14247 550 aaKnown RBP27.33■■□□□ 1.97
ROM1-201ENST00000278833 ZNF720Q7Z2F6 126 aa27.33■■□□□ 1.97
ROM1-201ENST00000278833 C1orf131Q8NDD1 294 aaKnown RBP27.33■■□□□ 1.97
ROM1-201ENST00000278833 OLIG1Q8TAK6 271 aa27.33■■□□□ 1.97
ROM1-201ENST00000278833 LMBR1Q8WVP7 490 aa27.33■■□□□ 1.97
ROM1-201ENST00000278833 RIT2Q99578 217 aa27.33■■□□□ 1.97
ROM1-201ENST00000278833 MYH11P35749 1972 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 GAS7O60861 476 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 PPP1R37O75864 691 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 RAD17O75943 681 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 BCRP11274 1271 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 MATR3P43243 847 aaKnown RBP eCLIP27.32■■□□□ 1.96
ROM1-201ENST00000278833 GHRHRQ02643 423 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 CXCL9Q07325 125 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 MYCT1Q8N699 235 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 TPCN2Q8NHX9 752 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 WHAMMQ8TF30 809 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 SCFD2Q8WU76 684 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 AJAP1Q9UKB5 411 aaPredicted RBP27.32■■□□□ 1.96
ROM1-201ENST00000278833 STXBP5LQ9Y2K9 1186 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 CNTNAP1P78357 1384 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 GOLGA6CA6NDK9 693 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 HEXIM1O94992 359 aaKnown RBP27.32■■□□□ 1.96
ROM1-201ENST00000278833 H2AFZP0C0S5 128 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 GOLGA6DP0CG33 693 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 MAPTP10636 758 aaKnown RBP27.32■■□□□ 1.96
ROM1-201ENST00000278833 H2AFVQ71UI9 128 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 HS2ST1Q7LGA3 356 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms