RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 UBE2Q2Q8WVN8 375 aa25.41■■□□□ 1.66
RAB40B-201ENST00000269347 SYT17Q9BSW7 474 aa25.41■■□□□ 1.66
RAB40B-201ENST00000269347 FHOD1Q9Y613 1164 aa25.41■■□□□ 1.66
RAB40B-201ENST00000269347 ARID2Q68CP9 1835 aa25.4■■□□□ 1.66
RAB40B-201ENST00000269347 A0A0G2JMZ2 1700 aa25.4■■□□□ 1.66
RAB40B-201ENST00000269347 IRF6O14896 467 aa25.4■■□□□ 1.66
RAB40B-201ENST00000269347 TCERG1LQ5VWI1 586 aa25.4■■□□□ 1.66
RAB40B-201ENST00000269347 KIAA1328Q86T90 577 aa25.4■■□□□ 1.66
RAB40B-201ENST00000269347 ZNF526Q8TF50 670 aaPredicted RBP25.4■■□□□ 1.66
RAB40B-201ENST00000269347 ACAD9Q9H845 621 aa25.4■■□□□ 1.66
RAB40B-201ENST00000269347 SEL1LQ9UBV2 794 aa25.4■■□□□ 1.66
RAB40B-201ENST00000269347 PUF60Q9UHX1 559 aaKnown RBP25.4■■□□□ 1.66
RAB40B-201ENST00000269347 LCA5LO95447 670 aa25.39■■□□□ 1.66
RAB40B-201ENST00000269347 ATP1A1P05023 1023 aaKnown RBP25.39■■□□□ 1.66
RAB40B-201ENST00000269347 ARID5AQ03989 594 aa25.39■■□□□ 1.66
RAB40B-201ENST00000269347 RSRC2Q7L4I2 434 aaKnown RBP25.39■■□□□ 1.66
RAB40B-201ENST00000269347 C4orf19Q8IY42 314 aa25.39■■□□□ 1.66
RAB40B-201ENST00000269347 MNS1Q8NEH6 495 aa25.39■■□□□ 1.66
RAB40B-201ENST00000269347 RBM46Q8TBY0 533 aaKnown RBP25.39■■□□□ 1.66
RAB40B-201ENST00000269347 IQCDQ96DY2 449 aa25.39■■□□□ 1.66
RAB40B-201ENST00000269347 ELP3Q9H9T3 547 aa25.39■■□□□ 1.66
RAB40B-201ENST00000269347 MLXIPQ9HAP2 919 aa25.39■■□□□ 1.66
RAB40B-201ENST00000269347 PCDHA13Q9Y5I0 950 aa25.39■■□□□ 1.66
RAB40B-201ENST00000269347 MACROD2A1Z1Q3 448 aa25.39■■□□□ 1.65
RAB40B-201ENST00000269347 K7ENM7 598 aa25.39■■□□□ 1.65
RAB40B-201ENST00000269347 PNMA6AP0CW24 399 aaPredicted RBP25.39■■□□□ 1.65
RAB40B-201ENST00000269347 XRCC5P13010 732 aaKnown RBP25.39■■□□□ 1.65
RAB40B-201ENST00000269347 ZSCAN20P17040 1043 aaPredicted RBP25.39■■□□□ 1.65
RAB40B-201ENST00000269347 VAV2P52735 878 aa25.39■■□□□ 1.65
RAB40B-201ENST00000269347 KRT83P78385 493 aa25.39■■□□□ 1.65
RAB40B-201ENST00000269347 NSUN6Q8TEA1 469 aaKnown RBP25.39■■□□□ 1.65
RAB40B-201ENST00000269347 NAPGQ99747 312 aaPredicted RBP25.39■■□□□ 1.65
RAB40B-201ENST00000269347 CDC23Q9UJX2 597 aa25.39■■□□□ 1.65
RAB40B-201ENST00000269347 CTAGE9A4FU28 777 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 SLC16A3O15427 465 aaKnown RBP25.38■■□□□ 1.65
RAB40B-201ENST00000269347 ENOX2Q16206 610 aaKnown RBP25.38■■□□□ 1.65
RAB40B-201ENST00000269347 ZNF662Q6ZS27 426 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 DNAAF5Q86Y56 855 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 FAM133AQ8N9E0 248 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 KIFC3Q9BVG8 833 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 ZNF446Q9NWS9 450 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 CAPN6Q9Y6Q1 641 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 WDR64B1ANS9 1081 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 LRRN2O75325 713 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 TRIM49P0CI25 452 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 TRIM49CP0CI26 452 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 PSMC5P62195 406 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 C9orf131Q5VYM1 1079 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 FAM186BQ8IYM0 893 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 ANKRD13CQ8N6S4 541 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 RDH13Q8NBN7 331 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 GPRASP2Q96D09 838 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 MOV10L1Q9BXT6 1211 aaKnown RBP25.38■■□□□ 1.65
RAB40B-201ENST00000269347 EDEM3Q9BZQ6 932 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 GBP3Q9H0R5 595 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 PCIF1Q9H4Z3 704 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 HOXC10Q9NYD6 342 aa25.38■■□□□ 1.65
RAB40B-201ENST00000269347 CGNQ9P2M7 1197 aaKnown RBP25.38■■□□□ 1.65
RAB40B-201ENST00000269347 SRGAP2O75044 1071 aa25.37■■□□□ 1.65
RAB40B-201ENST00000269347 EPB41P11171 864 aaKnown RBP25.37■■□□□ 1.65
RAB40B-201ENST00000269347 CBWD6Q4V339 395 aa25.37■■□□□ 1.65
RAB40B-201ENST00000269347 CBWD3Q5JTY5 395 aa25.37■■□□□ 1.65
RAB40B-201ENST00000269347 CBWD5Q5RIA9 395 aa25.37■■□□□ 1.65
RAB40B-201ENST00000269347 KLHDC7AQ5VTJ3 777 aa25.37■■□□□ 1.65
RAB40B-201ENST00000269347 BSNDQ8WZ55 320 aa25.37■■□□□ 1.65
RAB40B-201ENST00000269347 GABBR1Q9UBS5 961 aa25.37■■□□□ 1.65
RAB40B-201ENST00000269347 EFCAB8A8MWE9 144 aa25.37■■□□□ 1.65
RAB40B-201ENST00000269347 H2AFXP16104 143 aaPredicted RBP25.37■■□□□ 1.65
RAB40B-201ENST00000269347 RPL13P26373 211 aaKnown RBP25.37■■□□□ 1.65
RAB40B-201ENST00000269347 MAPK8IP2Q13387 824 aaPredicted RBP25.37■■□□□ 1.65
RAB40B-201ENST00000269347 RAPGEF1Q13905 1077 aa25.37■■□□□ 1.65
RAB40B-201ENST00000269347 NFIL3Q16649 462 aa25.37■■□□□ 1.65
RAB40B-201ENST00000269347 SFMBT2Q5VUG0 894 aa25.37■■□□□ 1.65
RAB40B-201ENST00000269347 LBX2Q6XYB7 198 aa25.37■■□□□ 1.65
RAB40B-201ENST00000269347 CCDC60Q8IWA6 550 aaPredicted RBP25.37■■□□□ 1.65
RAB40B-201ENST00000269347 DCPSQ96C86 337 aaKnown RBP25.37■■□□□ 1.65
RAB40B-201ENST00000269347 IFIH1Q9BYX4 1025 aaKnown RBP25.37■■□□□ 1.65
RAB40B-201ENST00000269347 MYO1AQ9UBC5 1043 aa25.37■■□□□ 1.65
RAB40B-201ENST00000269347 UCHL3P15374 230 aa25.36■■□□□ 1.65
RAB40B-201ENST00000269347 DLG4P78352 724 aa25.36■■□□□ 1.65
RAB40B-201ENST00000269347 KRT76Q01546 638 aa25.36■■□□□ 1.65
RAB40B-201ENST00000269347 EXOC3L4Q17RC7 722 aa25.36■■□□□ 1.65
RAB40B-201ENST00000269347 XKR9Q5GH70 373 aa25.36■■□□□ 1.65
RAB40B-201ENST00000269347 OTUD5Q96G74 571 aa25.36■■□□□ 1.65
RAB40B-201ENST00000269347 CBWD1Q9BRT8 395 aa25.36■■□□□ 1.65
RAB40B-201ENST00000269347 SLC16A4O15374 487 aa25.35■■□□□ 1.65
RAB40B-201ENST00000269347 AKR1B10O60218 316 aa25.35■■□□□ 1.65
RAB40B-201ENST00000269347 PLS3P13797 630 aa25.35■■□□□ 1.65
RAB40B-201ENST00000269347 TDRD12Q587J7 1177 aaKnown RBP25.35■■□□□ 1.65
RAB40B-201ENST00000269347 TEX35Q5T0J7 233 aa25.35■■□□□ 1.65
RAB40B-201ENST00000269347 NLRX1Q86UT6 975 aa25.35■■□□□ 1.65
RAB40B-201ENST00000269347 SULF1Q8IWU6 871 aa25.35■■□□□ 1.65
RAB40B-201ENST00000269347 PNMA2Q9UL42 364 aa25.35■■□□□ 1.65
RAB40B-201ENST00000269347 MYH9P35579 1960 aaKnown RBP25.35■■□□□ 1.65
RAB40B-201ENST00000269347 PSMC2P35998 433 aaKnown RBP25.35■■□□□ 1.65
RAB40B-201ENST00000269347 JAK3P52333 1124 aa25.35■■□□□ 1.65
RAB40B-201ENST00000269347 PEX3P56589 373 aa25.35■■□□□ 1.65
RAB40B-201ENST00000269347 IRF2BP2Q7Z5L9 587 aa25.35■■□□□ 1.65
RAB40B-201ENST00000269347 UBXN4Q92575 508 aa25.35■■□□□ 1.65
RAB40B-201ENST00000269347 PCDHA10Q9Y5I2 948 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms