RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 CCNJLQ8IV13 435 aa17.86■□□□□ 0.45
VSX2-201ENST00000261980 LMNTD2Q8IXW0 634 aa17.86■□□□□ 0.45
VSX2-201ENST00000261980 TPCN2Q8NHX9 752 aa17.86■□□□□ 0.45
VSX2-201ENST00000261980 SPOCK2Q92563 424 aa17.86■□□□□ 0.45
VSX2-201ENST00000261980 DDX12PQ92771 950 aa17.86■□□□□ 0.45
VSX2-201ENST00000261980 ERP27Q96DN0 273 aa17.86■□□□□ 0.45
VSX2-201ENST00000261980 POP1Q99575 1024 aaKnown RBP17.86■□□□□ 0.45
VSX2-201ENST00000261980 ISCA1Q9BUE6 129 aa17.86■□□□□ 0.45
VSX2-201ENST00000261980 LMCD1Q9NZU5 365 aa17.86■□□□□ 0.45
VSX2-201ENST00000261980 PPP1R9AQ9ULJ8 1098 aa17.86■□□□□ 0.45
VSX2-201ENST00000261980 SMAPO00193 183 aa17.86■□□□□ 0.45
VSX2-201ENST00000261980 PYGBP11216 843 aa17.86■□□□□ 0.45
VSX2-201ENST00000261980 GYG1P46976 350 aa17.86■□□□□ 0.45
VSX2-201ENST00000261980 NKX1-1Q15270 411 aaPredicted RBP17.86■□□□□ 0.45
VSX2-201ENST00000261980 EAPPQ56P03 285 aaPredicted RBP17.86■□□□□ 0.45
VSX2-201ENST00000261980 EXOC3L1Q86VI1 746 aa17.86■□□□□ 0.45
VSX2-201ENST00000261980 DTX3LQ8TDB6 740 aa17.86■□□□□ 0.45
VSX2-201ENST00000261980 ACTRT1Q8TDG2 376 aa17.86■□□□□ 0.45
VSX2-201ENST00000261980 MRRFQ96E11 262 aaKnown RBP17.86■□□□□ 0.45
VSX2-201ENST00000261980 IFT74Q96LB3 600 aa17.86■□□□□ 0.45
VSX2-201ENST00000261980 QTRT2Q9H974 415 aaKnown RBP17.86■□□□□ 0.45
VSX2-201ENST00000261980 CBX6O95503 412 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 CSF1RP07333 972 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 EPHB2P29323 1055 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 CNGA1P29973 690 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 ZC2HC1CQ53FD0 456 aaPredicted RBP17.85■□□□□ 0.45
VSX2-201ENST00000261980 CALML4Q96GE6 196 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 MMTAG2Q9BU76 263 aaKnown RBP17.85■□□□□ 0.45
VSX2-201ENST00000261980 ARHGEF3Q9NR81 526 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 COL4A3BPQ9Y5P4 624 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 RNF8O76064 485 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 OR52Z1P0C646 297 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 ROR2Q01974 943 aaKnown RBP17.85■□□□□ 0.45
VSX2-201ENST00000261980 ARHGEF2Q92974 986 aaKnown RBP17.85■□□□□ 0.45
VSX2-201ENST00000261980 CCSER1Q9C0I3 900 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.85■□□□□ 0.45
VSX2-201ENST00000261980 NAGPAQ9UK23 515 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 STX8Q9UNK0 236 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 PARP4Q9UKK3 1724 aaKnown RBP17.85■□□□□ 0.45
VSX2-201ENST00000261980 MYH1P12882 1939 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 PPFIA2O75334 1257 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 SLC5A1P13866 664 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 PTDSS1P48651 473 aaKnown RBP17.85■□□□□ 0.45
VSX2-201ENST00000261980 KIF6Q6ZMV9 814 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 LRRC57Q8N9N7 239 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 PWWP2AQ96N64 755 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 UBE2OQ9C0C9 1292 aaKnown RBP17.85■□□□□ 0.45
VSX2-201ENST00000261980 FAM114A2Q9NRY5 505 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 PCMTD2Q9NV79 361 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 TMEM260Q9NX78 707 aa17.85■□□□□ 0.45
VSX2-201ENST00000261980 ETS2P15036 469 aa17.84■□□□□ 0.45
VSX2-201ENST00000261980 VPS41P49754 854 aa17.84■□□□□ 0.45
VSX2-201ENST00000261980 AMPD3Q01432 767 aa17.84■□□□□ 0.45
VSX2-201ENST00000261980 MPP2Q14168 576 aa17.84■□□□□ 0.45
VSX2-201ENST00000261980 DNAJC10Q8IXB1 793 aa17.84■□□□□ 0.45
VSX2-201ENST00000261980 TGS1Q96RS0 853 aaKnown RBP17.84■□□□□ 0.45
VSX2-201ENST00000261980 TSG101Q99816 390 aa17.84■□□□□ 0.45
VSX2-201ENST00000261980 RGS17Q9UGC6 210 aaPredicted RBP17.84■□□□□ 0.45
VSX2-201ENST00000261980 RPTORQ8N122 1335 aa17.84■□□□□ 0.45
VSX2-201ENST00000261980 ANKRD63C9JTQ0 380 aa17.84■□□□□ 0.45
VSX2-201ENST00000261980 RBAK-RBAKDNI3L0D1 243 aa17.84■□□□□ 0.45
VSX2-201ENST00000261980 PRPHP41219 470 aa17.84■□□□□ 0.45
VSX2-201ENST00000261980 TRIP13Q15645 432 aaPredicted RBP17.84■□□□□ 0.45
VSX2-201ENST00000261980 POTEAQ6S8J7 498 aa17.84■□□□□ 0.45
VSX2-201ENST00000261980 APBB1IPQ7Z5R6 666 aaPredicted RBP17.84■□□□□ 0.45
VSX2-201ENST00000261980 TRIM74Q86UV6 250 aa17.84■□□□□ 0.45
VSX2-201ENST00000261980 TRIM73Q86UV7 250 aa17.84■□□□□ 0.45
VSX2-201ENST00000261980 ZC3H18Q86VM9 953 aaKnown RBP17.84■□□□□ 0.45
VSX2-201ENST00000261980 ANKLE1Q8NAG6 615 aa17.84■□□□□ 0.45
VSX2-201ENST00000261980 ITFG2Q969R8 447 aa17.84■□□□□ 0.45
VSX2-201ENST00000261980 C7orf25Q9BPX7 421 aa17.84■□□□□ 0.45
VSX2-201ENST00000261980 TMEM165Q9HC07 324 aa17.84■□□□□ 0.45
VSX2-201ENST00000261980 AHDC1Q5TGY3 1603 aaPredicted RBP17.84■□□□□ 0.45
VSX2-201ENST00000261980 SP100P23497 879 aaPredicted RBP17.83■□□□□ 0.45
VSX2-201ENST00000261980 AUHQ13825 339 aaKnown RBP17.83■□□□□ 0.45
VSX2-201ENST00000261980 RCN2Q14257 317 aa17.83■□□□□ 0.45
VSX2-201ENST00000261980 PLS1Q14651 629 aa17.83■□□□□ 0.45
VSX2-201ENST00000261980 DCAF12L1Q5VU92 463 aa17.83■□□□□ 0.45
VSX2-201ENST00000261980 JAMLQ86YT9 394 aa17.83■□□□□ 0.45
VSX2-201ENST00000261980 ERP44Q9BS26 406 aa17.83■□□□□ 0.45
VSX2-201ENST00000261980 AJAP1Q9UKB5 411 aaPredicted RBP17.83■□□□□ 0.45
VSX2-201ENST00000261980 MYH7P12883 1935 aa17.83■□□□□ 0.45
VSX2-201ENST00000261980 DISP2A7MBM2 1401 aa17.83■□□□□ 0.44
VSX2-201ENST00000261980 USP17L3A6NCW0 530 aa17.83■□□□□ 0.44
VSX2-201ENST00000261980 USP17L4A6NCW7 530 aa17.83■□□□□ 0.44
VSX2-201ENST00000261980 GFPT2O94808 682 aa17.83■□□□□ 0.44
VSX2-201ENST00000261980 FGFR1OPO95684 399 aaKnown RBP17.83■□□□□ 0.44
VSX2-201ENST00000261980 ZCCHC18P0CG32 403 aa17.83■□□□□ 0.44
VSX2-201ENST00000261980 GNAT2P19087 354 aa17.83■□□□□ 0.44
VSX2-201ENST00000261980 CALML3P27482 149 aa17.83■□□□□ 0.44
VSX2-201ENST00000261980 GBP1P32455 592 aa17.83■□□□□ 0.44
VSX2-201ENST00000261980 EIF3BP55884 814 aaKnown RBP17.83■□□□□ 0.44
VSX2-201ENST00000261980 SLMAPQ14BN4 828 aa17.83■□□□□ 0.44
VSX2-201ENST00000261980 PTF1AQ7RTS3 328 aa17.83■□□□□ 0.44
VSX2-201ENST00000261980 USP17L1Q7RTZ2 530 aa17.83■□□□□ 0.44
VSX2-201ENST00000261980 ECHDC2Q86YB7 292 aa17.83■□□□□ 0.44
VSX2-201ENST00000261980 LARP4BQ92615 738 aaKnown RBP17.83■□□□□ 0.44
VSX2-201ENST00000261980 UBA5Q9GZZ9 404 aa17.83■□□□□ 0.44
VSX2-201ENST00000261980 BLOC1S4Q9NUP1 217 aa17.83■□□□□ 0.44
VSX2-201ENST00000261980 KLHL14Q9P2G3 628 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms