RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 DEFB132Q7Z7B7 95 aa19.2■□□□□ 0.66
CDKN1B-201ENST00000228872 DNAAF5Q86Y56 855 aa19.2■□□□□ 0.66
CDKN1B-201ENST00000228872 WDR66Q8TBY9 1149 aa19.2■□□□□ 0.66
CDKN1B-201ENST00000228872 LARP4BQ92615 738 aaKnown RBP19.2■□□□□ 0.66
CDKN1B-201ENST00000228872 PRCCQ92733 491 aaPredicted RBP19.2■□□□□ 0.66
CDKN1B-201ENST00000228872 PRMT1Q99873 361 aaKnown RBP19.2■□□□□ 0.66
CDKN1B-201ENST00000228872 TRAF5O00463 557 aa19.2■□□□□ 0.66
CDKN1B-201ENST00000228872 LIN7AO14910 233 aaPredicted RBP19.2■□□□□ 0.66
CDKN1B-201ENST00000228872 IL1R1P14778 569 aa19.2■□□□□ 0.66
CDKN1B-201ENST00000228872 PTK2Q05397 1052 aa19.2■□□□□ 0.66
CDKN1B-201ENST00000228872 SPTY2D1Q68D10 685 aaPredicted RBP19.2■□□□□ 0.66
CDKN1B-201ENST00000228872 ZNF571Q7Z3V5 609 aaPredicted RBP19.2■□□□□ 0.66
CDKN1B-201ENST00000228872 PEX26Q7Z412 305 aa19.2■□□□□ 0.66
CDKN1B-201ENST00000228872 NSRP1Q9H0G5 558 aaKnown RBP19.2■□□□□ 0.66
CDKN1B-201ENST00000228872 ECT2Q9H8V3 914 aa19.2■□□□□ 0.66
CDKN1B-201ENST00000228872 POLLQ9UGP5 575 aa19.2■□□□□ 0.66
CDKN1B-201ENST00000228872 STXBP5LQ9Y2K9 1186 aa19.2■□□□□ 0.66
CDKN1B-201ENST00000228872 IGF2BP3O00425 579 aaKnown RBP eCLIP19.19■□□□□ 0.66
CDKN1B-201ENST00000228872 ADCY2Q08462 1091 aa19.19■□□□□ 0.66
CDKN1B-201ENST00000228872 SPICE1Q8N0Z3 855 aa19.19■□□□□ 0.66
CDKN1B-201ENST00000228872 AZI2Q9H6S1 392 aa19.19■□□□□ 0.66
CDKN1B-201ENST00000228872 CYP2D6P10635 497 aa19.19■□□□□ 0.66
CDKN1B-201ENST00000228872 MAP2K1Q02750 393 aaPredicted RBP19.19■□□□□ 0.66
CDKN1B-201ENST00000228872 GRM4Q14833 912 aa19.19■□□□□ 0.66
CDKN1B-201ENST00000228872 NONOQ15233 471 aaKnown RBP eCLIP19.19■□□□□ 0.66
CDKN1B-201ENST00000228872 AP1ARQ63HQ0 302 aa19.19■□□□□ 0.66
CDKN1B-201ENST00000228872 STYK1Q6J9G0 422 aa19.19■□□□□ 0.66
CDKN1B-201ENST00000228872 MYOCDQ8IZQ8 938 aa19.19■□□□□ 0.66
CDKN1B-201ENST00000228872 KANSL2Q9H9L4 492 aa19.19■□□□□ 0.66
CDKN1B-201ENST00000228872 SUCLA2Q9P2R7 463 aaPredicted RBP19.19■□□□□ 0.66
CDKN1B-201ENST00000228872 TLDC2A0PJX2 215 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 ENO4A6NNW6 628 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 CYTH3O43739 400 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 IFI35P80217 286 aaPredicted RBP19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 BLMHQ13867 455 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 GALNTL6Q49A17 601 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 KRT25Q7Z3Z0 450 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 SLFN11Q7Z7L1 901 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 ERICH1Q86X53 443 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 TRIM59Q8IWR1 403 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 PNMA1Q8ND90 353 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 NEK9Q8TD19 979 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 ZMYND12Q9H0C1 365 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 MAD2L2Q9UI95 211 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 CCDC169A6NNP5 214 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 SNX3O60493 162 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 PSMD2Q13200 908 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 CCDC125Q86Z20 511 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 RNF25Q96BH1 459 aaPredicted RBP19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 GPR101Q96P66 508 aaPredicted RBP19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 PABPC3Q9H361 631 aaKnown RBP19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 CD209Q9NNX6 404 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 ZDHHC18Q9NUE0 388 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 ANKRD33BA6NCL7 494 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 A8MUI8 341 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 RGS16O15492 202 aaPredicted RBP19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 OAS1P00973 400 aaKnown RBP19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 HOXA7P31268 230 aaPredicted RBP19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 PMS2P54278 862 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 DENND2CQ68D51 928 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 IRF2BP2Q7Z5L9 587 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 NEK8Q86SG6 692 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 PARD3BQ8TEW8 1205 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 DDX12PQ92771 950 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 RAB17Q9H0T7 212 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 GGT7Q9UJ14 662 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 NAGPAQ9UK23 515 aa19.18■□□□□ 0.66
CDKN1B-201ENST00000228872 MYH4Q9Y623 1939 aa19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 SMIM23A6NLE4 172 aa19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 TXKP42681 527 aa19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 GNAQP50148 359 aa19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 ZNF131P52739 623 aa19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 MKRN4PQ13434 485 aaPredicted RBP19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 DAAM2Q86T65 1068 aa19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 RAD54LQ92698 747 aa19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 CDK5RAP3Q96JB5 506 aa19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 CEP63Q96MT8 703 aa19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 CRNKL1Q9BZJ0 848 aaKnown RBP19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 GOPCQ9HD26 462 aa19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 SLX4Q8IY92 1834 aa19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 KRT16P08779 473 aa19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 IFNAR2P48551 515 aa19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 ALKBH5Q6P6C2 394 aaKnown RBP19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 DCP1AQ9NPI6 582 aaPredicted RBP19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 NR2E1Q9Y466 385 aa19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 CD2APQ9Y5K6 639 aa19.17■□□□□ 0.66
CDKN1B-201ENST00000228872 H0YIN7 160 aa19.16■□□□□ 0.66
CDKN1B-201ENST00000228872 AGTP01019 485 aa19.16■□□□□ 0.66
CDKN1B-201ENST00000228872 DUPD1Q68J44 220 aa19.16■□□□□ 0.66
CDKN1B-201ENST00000228872 NT5DC3Q86UY8 548 aa19.16■□□□□ 0.66
CDKN1B-201ENST00000228872 DZIP1Q86YF9 867 aaKnown RBP19.16■□□□□ 0.66
CDKN1B-201ENST00000228872 SPDYE1Q8NFV5 336 aaPredicted RBP19.16■□□□□ 0.66
CDKN1B-201ENST00000228872 ZBTB10Q96DT7 871 aa19.16■□□□□ 0.66
CDKN1B-201ENST00000228872 SPDYE3A6NKU9 549 aa19.16■□□□□ 0.66
CDKN1B-201ENST00000228872 LINGO3P0C6S8 592 aa19.16■□□□□ 0.66
CDKN1B-201ENST00000228872 ABL2P42684 1182 aa19.16■□□□□ 0.66
CDKN1B-201ENST00000228872 ANKRD20A2Q5SQ80 823 aa19.16■□□□□ 0.66
CDKN1B-201ENST00000228872 ANKRD20A1Q5TYW2 823 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms