RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 MNAT1P51948 309 aa19.05■□□□□ 0.64
PRPF19-201ENST00000227524 MTMR3Q13615 1198 aa19.05■□□□□ 0.64
PRPF19-201ENST00000227524 GIT2Q14161 759 aa19.05■□□□□ 0.64
PRPF19-201ENST00000227524 KNOP1Q1ED39 458 aaKnown RBP19.05■□□□□ 0.64
PRPF19-201ENST00000227524 C6orf89Q6UWU4 347 aa19.05■□□□□ 0.64
PRPF19-201ENST00000227524 RUFY4Q6ZNE9 571 aa19.05■□□□□ 0.64
PRPF19-201ENST00000227524 EPM2AIP1Q7L775 607 aaPredicted RBP19.05■□□□□ 0.64
PRPF19-201ENST00000227524 ZFPM1Q8IX07 1006 aa19.05■□□□□ 0.64
PRPF19-201ENST00000227524 SIX2Q9NPC8 291 aa19.05■□□□□ 0.64
PRPF19-201ENST00000227524 SUCLA2Q9P2R7 463 aaPredicted RBP19.05■□□□□ 0.64
PRPF19-201ENST00000227524 A0A0A6YYK5 440 aaPredicted RBP19.04■□□□□ 0.64
PRPF19-201ENST00000227524 USP17L15C9J2P7 530 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 USP17L13C9JLJ4 530 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 USP17L11C9JVI0 530 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 USP17L18D6R9N7 530 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 USP17L22D6RA61 530 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 USP17L17D6RBQ6 530 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 USP17L19D6RCP7 530 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 USP17L20D6RJB6 530 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 PPIP5K2O43314 1243 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 H2AFZP0C0S5 128 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 SLURP2P0DP57 97 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 ITGA4P13612 1032 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 FLT3P36888 993 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 JAM2P57087 298 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 USP17L24Q0WX57 530 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 IFT88Q13099 833 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 DCAF17Q5H9S7 520 aaPredicted RBP19.04■□□□□ 0.64
PRPF19-201ENST00000227524 GPATCH4Q5T3I0 446 aaKnown RBP19.04■□□□□ 0.64
PRPF19-201ENST00000227524 AGBL2Q5U5Z8 902 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 USP17L6PQ6QN14 398 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 KCTD1Q719H9 257 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 H2AFVQ71UI9 128 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 SFR1Q86XK3 245 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 LMBR1Q8WVP7 490 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 UBLCP1Q8WVY7 318 aaPredicted RBP19.04■□□□□ 0.64
PRPF19-201ENST00000227524 SLITRK6Q9H5Y7 841 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 VCPKMTQ9H867 229 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 UTRNP46939 3433 aa19.04■□□□□ 0.64
PRPF19-201ENST00000227524 DAPK3O43293 454 aa19.03■□□□□ 0.64
PRPF19-201ENST00000227524 CALUO43852 315 aaPredicted RBP19.03■□□□□ 0.64
PRPF19-201ENST00000227524 IRX3P78415 501 aaPredicted RBP19.03■□□□□ 0.64
PRPF19-201ENST00000227524 ACTN3Q08043 901 aaPredicted RBP19.03■□□□□ 0.64
PRPF19-201ENST00000227524 MBOAT7Q96N66 472 aa19.03■□□□□ 0.64
PRPF19-201ENST00000227524 ANO3Q9BYT9 981 aa19.03■□□□□ 0.64
PRPF19-201ENST00000227524 AMACRQ9UHK6 382 aa19.03■□□□□ 0.64
PRPF19-201ENST00000227524 CYP3A7-CYP3A51PA0A087WV96 503 aa19.03■□□□□ 0.64
PRPF19-201ENST00000227524 GMNCA6NCL1 334 aa19.03■□□□□ 0.64
PRPF19-201ENST00000227524 AKAP3O75969 853 aa19.03■□□□□ 0.64
PRPF19-201ENST00000227524 CYP3A7P24462 503 aa19.03■□□□□ 0.64
PRPF19-201ENST00000227524 CACNB3P54284 484 aa19.03■□□□□ 0.64
PRPF19-201ENST00000227524 NT5DC3Q86UY8 548 aa19.03■□□□□ 0.64
PRPF19-201ENST00000227524 VPS36Q86VN1 386 aa19.03■□□□□ 0.64
PRPF19-201ENST00000227524 C3orf20Q8ND61 904 aa19.03■□□□□ 0.64
PRPF19-201ENST00000227524 SUPT20HQ8NEM7 779 aa19.03■□□□□ 0.64
PRPF19-201ENST00000227524 REEP2Q9BRK0 252 aa19.03■□□□□ 0.64
PRPF19-201ENST00000227524 INTUQ9ULD6 942 aa19.03■□□□□ 0.64
PRPF19-201ENST00000227524 DDX3XO00571 662 aaKnown RBP eCLIP19.02■□□□□ 0.644e-9■■□□□ 12.9
PRPF19-201ENST00000227524 PDXKO00764 312 aa19.02■□□□□ 0.64
PRPF19-201ENST00000227524 TRAPPC3O43617 180 aa19.02■□□□□ 0.64
PRPF19-201ENST00000227524 PSMC6P62333 389 aa19.02■□□□□ 0.64
PRPF19-201ENST00000227524 PPP2R2AP63151 447 aa19.02■□□□□ 0.64
PRPF19-201ENST00000227524 PLCB4Q15147 1175 aa19.02■□□□□ 0.64
PRPF19-201ENST00000227524 TMC3Q7Z5M5 1100 aa19.02■□□□□ 0.64
PRPF19-201ENST00000227524 CATSPER3Q86XQ3 398 aa19.02■□□□□ 0.64
PRPF19-201ENST00000227524 SLFN12Q8IYM2 578 aa19.02■□□□□ 0.64
PRPF19-201ENST00000227524 SYCE1Q8N0S2 351 aa19.02■□□□□ 0.64
PRPF19-201ENST00000227524 BCCIPQ9P287 314 aaKnown RBP eCLIP19.02■□□□□ 0.64
PRPF19-201ENST00000227524 SERPINB13Q9UIV8 391 aa19.02■□□□□ 0.64
PRPF19-201ENST00000227524 TTI1O43156 1089 aa19.02■□□□□ 0.63
PRPF19-201ENST00000227524 SHMT1P34896 483 aa19.02■□□□□ 0.63
PRPF19-201ENST00000227524 SPIRE1Q08AE8 756 aa19.02■□□□□ 0.63
PRPF19-201ENST00000227524 PABPC4Q13310 644 aaKnown RBP eCLIP19.02■□□□□ 0.631e-16■■■■■ 56.6
PRPF19-201ENST00000227524 DRP2Q13474 957 aa19.02■□□□□ 0.63
PRPF19-201ENST00000227524 TCERG1LQ5VWI1 586 aa19.02■□□□□ 0.63
PRPF19-201ENST00000227524 DAAM2Q86T65 1068 aa19.02■□□□□ 0.63
PRPF19-201ENST00000227524 CCDC26Q8TAB7 109 aa19.02■□□□□ 0.63
PRPF19-201ENST00000227524 SEC14L1Q92503 715 aa19.02■□□□□ 0.63
PRPF19-201ENST00000227524 HES6Q96HZ4 224 aa19.02■□□□□ 0.63
PRPF19-201ENST00000227524 PSMD1Q99460 953 aa19.02■□□□□ 0.63
PRPF19-201ENST00000227524 GLT8D2Q9H1C3 349 aa19.02■□□□□ 0.63
PRPF19-201ENST00000227524 GCNT4Q9P109 453 aa19.02■□□□□ 0.63
PRPF19-201ENST00000227524 FAM198AQ9UFP1 575 aa19.02■□□□□ 0.63
PRPF19-201ENST00000227524 SERPINA10Q9UK55 444 aa19.02■□□□□ 0.63
PRPF19-201ENST00000227524 ASTN1O14525 1302 aa19.02■□□□□ 0.63
PRPF19-201ENST00000227524 MEIS1O00470 390 aa19.01■□□□□ 0.63
PRPF19-201ENST00000227524 SLC16A3O15427 465 aaKnown RBP19.01■□□□□ 0.63
PRPF19-201ENST00000227524 NR3C1P04150 777 aa19.01■□□□□ 0.63
PRPF19-201ENST00000227524 TMOD1P28289 359 aa19.01■□□□□ 0.63
PRPF19-201ENST00000227524 NPEPPSP55786 919 aa19.01■□□□□ 0.63
PRPF19-201ENST00000227524 KCTD19Q17RG1 926 aaPredicted RBP19.01■□□□□ 0.63
PRPF19-201ENST00000227524 CCDC13Q8IYE1 715 aa19.01■□□□□ 0.63
PRPF19-201ENST00000227524 SYT2Q8N9I0 419 aaPredicted RBP19.01■□□□□ 0.63
PRPF19-201ENST00000227524 U2AF1L4Q8WU68 220 aaKnown RBP19.01■□□□□ 0.63
PRPF19-201ENST00000227524 DNAJC18Q9H819 358 aa19.01■□□□□ 0.63
PRPF19-201ENST00000227524 METTL14Q9HCE5 456 aaKnown RBP19.01■□□□□ 0.63
PRPF19-201ENST00000227524 TYW1Q9NV66 732 aaKnown RBP19.01■□□□□ 0.63
PRPF19-201ENST00000227524 CNOT8Q9UFF9 292 aaKnown RBP19.01■□□□□ 0.63
PRPF19-201ENST00000227524 MYO3BQ8WXR4 1341 aa19.01■□□□□ 0.63
PRPF19-201ENST00000227524 ZBTB7AO95365 584 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms