RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 OTUD5Q96G74 571 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 BHMT2Q9H2M3 363 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 COG4Q9H9E3 785 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 IFNA8P32881 189 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 RBBP7Q16576 425 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 PIGBQ92521 554 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.19□□□□□ -0.14
COL1A1-201ENST00000225964 FRMD3A2A2Y4 597 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 PYGLP06737 847 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 SP110Q9HB58 689 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 POLR3EQ9NVU0 708 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 DONSONQ9NYP3 566 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 KIF23Q02241 960 aaPredicted RBP14.18□□□□□ -0.14
COL1A1-201ENST00000225964 SH3KBP1Q96B97 665 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 THEGQ9P2T0 379 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 TMCC1O94876 653 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 CCT5P48643 541 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 DHX9Q08211 1270 aaKnown RBP14.18□□□□□ -0.14
COL1A1-201ENST00000225964 PKP1Q13835 747 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 DYRK4Q9NR20 520 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 PRPF4O43172 522 aaKnown RBP eCLIP14.18□□□□□ -0.14
COL1A1-201ENST00000225964 CPB1P15086 417 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 SLC8A1P32418 973 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 IFT88Q13099 833 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 DPCR1Q3MIW9 517 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 MRFAP1L1Q96HT8 127 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 MED4Q9NPJ6 270 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 HEY1Q9Y5J3 304 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 SEC31AO94979 1220 aaKnown RBP14.18□□□□□ -0.14
COL1A1-201ENST00000225964 RASSF3Q86WH2 238 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 PIP4K2CQ8TBX8 421 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 OSBP2Q969R2 916 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 FAM213AQ9BRX8 229 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 RRAGDQ9NQL2 400 aaPredicted RBP14.18□□□□□ -0.14
COL1A1-201ENST00000225964 ASNSD1Q9NWL6 643 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 ZNF212Q9UDV6 495 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 FBXO40Q9UH90 709 aa14.18□□□□□ -0.14
COL1A1-201ENST00000225964 RASEFQ8IZ41 740 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 RAET1EQ8TD07 263 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 SPATA33Q96N06 139 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 UBE4BO95155 1302 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 MYO3BQ8WXR4 1341 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 A0A087WWV3 80 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 ADORA2BP29275 332 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 RASIP1Q5U651 963 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 TRAIPQ9BWF2 469 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 CDC23Q9UJX2 597 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 ZNF335Q9H4Z2 1342 aaPredicted RBP14.17□□□□□ -0.14
COL1A1-201ENST00000225964 M0QYV0 167 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 OCM2P0CE71 109 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 OCMP0CE72 109 aaPredicted RBP14.17□□□□□ -0.14
COL1A1-201ENST00000225964 SLC7A5Q01650 507 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 DDX53Q86TM3 631 aaKnown RBP14.17□□□□□ -0.14
COL1A1-201ENST00000225964 VPS39Q96JC1 886 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 GTSE1Q9NYZ3 720 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 PACSIN2Q9UNF0 486 aaPredicted RBP14.17□□□□□ -0.14
COL1A1-201ENST00000225964 LUC7L3O95232 432 aaKnown RBP14.17□□□□□ -0.14
COL1A1-201ENST00000225964 CYP2D6P10635 497 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 RASGRF1Q13972 1273 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 C11orf57Q6ZUT1 292 aaPredicted RBP14.17□□□□□ -0.14
COL1A1-201ENST00000225964 ASIC4Q96FT7 647 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 SERPINI1Q99574 410 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 SAMSN1Q9NSI8 373 aaKnown RBP14.17□□□□□ -0.14
COL1A1-201ENST00000225964 LBRQ14739 615 aaKnown RBP14.17□□□□□ -0.14
COL1A1-201ENST00000225964 TEKT4Q8WW24 435 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 DYDC2Q96IM9 177 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 NR1H4Q96RI1 486 aaPredicted RBP14.17□□□□□ -0.14
COL1A1-201ENST00000225964 TRPC7Q9HCX4 862 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 RNF123Q5XPI4 1314 aa14.17□□□□□ -0.14
COL1A1-201ENST00000225964 FAM196BA6NMK8 535 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 SLC16A4O15374 487 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 VCPP55072 806 aaKnown RBP14.16□□□□□ -0.14
COL1A1-201ENST00000225964 ETF1P62495 437 aaKnown RBP14.16□□□□□ -0.14
COL1A1-201ENST00000225964 POLR3CQ9BUI4 534 aaPredicted RBP14.16□□□□□ -0.14
COL1A1-201ENST00000225964 TMEM106CQ9BVX2 250 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 YIPF2Q9BWQ6 316 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 KCNH4Q9UQ05 1017 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 SRPRBQ9Y5M8 271 aaKnown RBP14.16□□□□□ -0.14
COL1A1-201ENST00000225964 FCER1AP12319 257 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 RWDD2BP57060 319 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 AP1B1Q10567 949 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 ARHGEF25Q86VW2 580 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 NRBP1Q9UHY1 535 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 PLEKHG1Q9ULL1 1385 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 MOCS2O96007 188 aaPredicted RBP14.16□□□□□ -0.14
COL1A1-201ENST00000225964 PPP4R3CPQ6ZMV5 832 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 SUN2Q9UH99 717 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 SLFN14P0C7P3 912 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 AP3B2Q13367 1082 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 ZMYND12Q9H0C1 365 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 SAYSD1Q9NPB0 183 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 ANAPC7Q9UJX3 599 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 GOLGA8MH3BSY2 632 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 GCKP35557 465 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 CACNB2Q08289 660 aaPredicted RBP14.16□□□□□ -0.14
COL1A1-201ENST00000225964 SH3GLB2Q9NR46 395 aa14.16□□□□□ -0.14
COL1A1-201ENST00000225964 ESRRGP62508 458 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 SWSAP1Q6NVH7 229 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 TRIM4Q9C037 500 aa14.15□□□□□ -0.14
COL1A1-201ENST00000225964 ATG3Q9NT62 314 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms