RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Crhr2Q60748 411 aa16.23■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Xpnpep1Q6P1B1 623 aa16.23■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Acot5Q6Q2Z6 421 aa16.23■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Gja6Q6S5G4 283 aa16.23■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Sval3Q76I99 144 aa16.23■□□□□ 0.19
Ercc1-201ENSMUST00000003645 C2cd5Q7TPS5 1016 aaKnown RBP16.23■□□□□ 0.19
Ercc1-201ENSMUST00000003645 LppQ8BFW7 613 aa16.23■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Anks1bQ8BIZ1 1259 aa16.23■□□□□ 0.19
Ercc1-201ENSMUST00000003645 NelfbQ8C4Y3 580 aa16.23■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Tab2Q99K90 693 aa16.23■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Ears2Q9CXJ1 523 aa16.23■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Spock2Q9ER58 423 aa16.23■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Utp3Q9JI13 469 aaKnown RBP16.23■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Gm4985A2ALC6 410 aa16.22■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Skor2A7M7C7 1008 aa16.22■□□□□ 0.19
Ercc1-201ENSMUST00000003645 1700018F24RikB2RW27 314 aa16.22■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Heatr4E9Q357 955 aa16.22■□□□□ 0.19
Ercc1-201ENSMUST00000003645 GclmO09172 274 aaKnown RBP16.22■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Eif3dO70194 548 aaKnown RBP16.22■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Pak1O88643 545 aa16.22■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Akr1b1P45376 316 aa16.22■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Stim1P70302 685 aa16.22■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Znf354cQ571J5 560 aa16.22■□□□□ 0.19
Ercc1-201ENSMUST00000003645 LbpQ61805 481 aa16.22■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Ercc6lQ8BHK9 1240 aa16.22■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Tsen34Q8BMZ5 316 aa16.22■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Vopp1Q8R1C3 172 aa16.22■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Wrap53Q8VC51 532 aa16.22■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Rab3il1Q8VDV3 383 aa16.22■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Olfr395Q8VGR3 312 aa16.22■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Ino80bQ99PT3 375 aaKnown RBP16.22■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Ribc1Q9D0B8 379 aa16.22■□□□□ 0.19
Ercc1-201ENSMUST00000003645 DohhA0A1Y7VJ29 135 aa16.21■□□□□ 0.19
Ercc1-201ENSMUST00000003645 4932429P05RikA2ADI4 785 aa16.21■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Magea10A2AMW4 325 aa16.21■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Klhdc7aA2APT9 773 aa16.21■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Zkscan7E9PVW1 718 aa16.21■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Gm4841E9QAA8 417 aa16.21■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Serpinb8O08800 374 aaKnown RBP16.21■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Kpna6O35345 536 aa16.21■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Scp2P32020 547 aaKnown RBP16.21■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Gtf2bP62915 316 aa16.21■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Adam6bQ6IMH7 756 aa16.21■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Skiv2lQ6NZR5 1244 aa16.21■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Prpf31Q8CCF0 499 aaKnown RBP16.21■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Olfr397Q8VEZ6 315 aa16.21■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Rtfdc1Q99K95 307 aa16.21■□□□□ 0.19
Ercc1-201ENSMUST00000003645 Gm43951A0A0N4SUT6 962 aa16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Gm45208A0A140LJ36 292 aa16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Taf4bG5E8Z2 855 aa16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Pla2g4bP0C871 782 aa16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Tnni3P48787 211 aa16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Clcn3P51791 818 aa16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Snx27Q3UHD6 539 aa16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Avpr1aQ62463 423 aa16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Nudt16Q6P3D0 195 aa16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 E2f7Q6S7F2 904 aa16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 PodnQ7TQ62 611 aa16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Prpf40bQ80W14 870 aa16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Taco1Q8K0Z7 294 aaKnown RBP16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Tmem134Q8R0J4 195 aa16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Sgpl1Q8R0X7 568 aa16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 AclyQ91V92 1091 aaKnown RBP16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Prpf6Q91YR7 941 aaKnown RBP16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Tnpo2Q99LG2 887 aaKnown RBP16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Slc12a9Q99MR3 914 aa16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Cd2bp2Q9CWK3 342 aaKnown RBP16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Cyp2s1Q9DBX6 501 aa16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Cbx6Q9DBY5 414 aa16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Uchl5Q9WUP7 329 aa16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Myh11O08638 1972 aa16.2■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Ank3G5E8K5 1961 aa16.19■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Tmem265E9Q8G3 109 aa16.19■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Mdm4O35618 489 aa16.19■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Ccnd2P30280 289 aa16.19■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Dnm2P39054 870 aaKnown RBP16.19■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Nfe2Q07279 373 aa16.19■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Smyd5Q3TYX3 416 aa16.19■□□□□ 0.18
Ercc1-201ENSMUST00000003645 AlcamQ61490 583 aa16.19■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Ppp2r5aQ6PD03 486 aa16.19■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Pi4kbQ8BKC8 816 aa16.19■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Aldh5a1Q8BWF0 523 aa16.19■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Ankk1Q8BZ25 745 aa16.19■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Zmynd15Q8C0R7 736 aa16.19■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Fam161bQ8CB59 589 aa16.19■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Taf6lQ8R2K4 616 aa16.19■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Upb1Q8VC97 393 aa16.19■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Txndc5Q91W90 417 aa16.19■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Tbc1d15Q9CXF4 671 aa16.19■□□□□ 0.18
Ercc1-201ENSMUST00000003645 LctF8VPT3 1931 aa16.19■□□□□ 0.18
Ercc1-201ENSMUST00000003645 EpoP07321 192 aa16.18■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Mcm5P49718 733 aa16.18■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Serpina1eQ00898 413 aa16.18■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Znf865Q3U3I9 1058 aa16.18■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Lrrc55Q3UY51 311 aa16.18■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Sycp1Q62209 993 aa16.18■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Jade2Q6ZQF7 829 aa16.18■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Celf6Q7TN33 460 aaKnown RBP16.18■□□□□ 0.18
Ercc1-201ENSMUST00000003645 F13a1Q8BH61 732 aa16.18■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Zswim3Q8CFL8 695 aa16.18■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms