RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 SCLT1Q96NL6 688 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 MAP7D2Q96T17 732 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 MMTAG2Q9BU76 263 aaKnown RBP14.41□□□□□ -0.1
PHGDH-220ENST00000641570 TIPINQ9BVW5 301 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 GOLPH3LQ9H4A5 285 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 ZHX3Q9H4I2 956 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 CYP26B1Q9NR63 512 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 SERTAD1Q9UHV2 236 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 COL1A2P08123 1366 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 NRCAMQ92823 1304 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 TLR3O15455 904 aaKnown RBP14.4□□□□□ -0.1
PHGDH-220ENST00000641570 MAGEB2O15479 319 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 GAS2O43903 313 aaKnown RBP14.4□□□□□ -0.1
PHGDH-220ENST00000641570 NR1I2O75469 434 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 DGAT1O75907 488 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 FAM13AO94988 1023 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 SPATA31C1P0DKV0 1188 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 HOXD8P13378 290 aaPredicted RBP14.4□□□□□ -0.1
PHGDH-220ENST00000641570 AFMP43652 599 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 ASIC1P78348 528 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 MCM6Q14566 821 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 GRIK4Q16099 956 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 PLA2G4FQ68DD2 849 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 LHX8Q68G74 356 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 PADI6Q6TGC4 694 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 KRBA2Q6ZNG9 492 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 RSPH3Q86UC2 560 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 METTL13Q8N6R0 699 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 KLHDC9Q8NEP7 349 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 TCP11Q8WWU5 503 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 DRC1Q96MC2 740 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 TIGD1Q96MW7 591 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 PNMA5Q96PV4 448 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 MTRQ99707 1265 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 OGDHLQ9ULD0 1010 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 HPSEQ9Y251 543 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 MROH7Q68CQ1 1323 aa14.4□□□□□ -0.1
PHGDH-220ENST00000641570 FAM237AA0A1B0GTK4 181 aa14.39□□□□□ -0.11
PHGDH-220ENST00000641570 A0A1W2PQ45 241 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-220ENST00000641570 A0A1W2PQY0 241 aa14.39□□□□□ -0.11
PHGDH-220ENST00000641570 M0QZ92 97 aa14.39□□□□□ -0.11
PHGDH-220ENST00000641570 RPLP2P05387 115 aaKnown RBP14.39□□□□□ -0.11
PHGDH-220ENST00000641570 SMIM10L2AP0DMW4 78 aa14.39□□□□□ -0.11
PHGDH-220ENST00000641570 SMIM10L2BP0DMW5 78 aa14.39□□□□□ -0.11
PHGDH-220ENST00000641570 IDEP14735 1019 aa14.39□□□□□ -0.11
PHGDH-220ENST00000641570 LIG1P18858 919 aa14.39□□□□□ -0.11
PHGDH-220ENST00000641570 GJA8P48165 433 aa14.39□□□□□ -0.11
PHGDH-220ENST00000641570 NKX3-2P78367 333 aa14.39□□□□□ -0.11
PHGDH-220ENST00000641570 CCDC183Q5T5S1 534 aa14.39□□□□□ -0.11
PHGDH-220ENST00000641570 FAM102BQ5T8I3 360 aa14.39□□□□□ -0.11
PHGDH-220ENST00000641570 CCDC65Q8IXS2 484 aa14.39□□□□□ -0.11
PHGDH-220ENST00000641570 FMR1NBQ8N0W7 255 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-220ENST00000641570 SYT2Q8N9I0 419 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-220ENST00000641570 IFT74Q96LB3 600 aa14.39□□□□□ -0.11
PHGDH-220ENST00000641570 PCYT2Q99447 389 aa14.39□□□□□ -0.11
PHGDH-220ENST00000641570 C16orf70Q9BSU1 422 aa14.39□□□□□ -0.11
PHGDH-220ENST00000641570 RMND1Q9NWS8 449 aa14.39□□□□□ -0.11
PHGDH-220ENST00000641570 KCNG1Q9UIX4 513 aa14.39□□□□□ -0.11
PHGDH-220ENST00000641570 LETM1O95202 739 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-220ENST00000641570 INSRRP14616 1297 aa14.38□□□□□ -0.11
PHGDH-220ENST00000641570 RARRES1P49788 294 aa14.38□□□□□ -0.11
PHGDH-220ENST00000641570 PTPN11Q06124 597 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-220ENST00000641570 ITGA7Q13683 1181 aa14.38□□□□□ -0.11
PHGDH-220ENST00000641570 EMC2Q15006 297 aa14.38□□□□□ -0.11
PHGDH-220ENST00000641570 POSTNQ15063 836 aa14.38□□□□□ -0.11
PHGDH-220ENST00000641570 KLHL40Q2TBA0 621 aa14.38□□□□□ -0.11
PHGDH-220ENST00000641570 LONRF3Q496Y0 759 aa14.38□□□□□ -0.11
PHGDH-220ENST00000641570 NFRKBQ6P4R8 1299 aa14.38□□□□□ -0.11
PHGDH-220ENST00000641570 CCDC155Q8N6L0 562 aa14.38□□□□□ -0.11
PHGDH-220ENST00000641570 SMARCE1Q969G3 411 aa14.38□□□□□ -0.11
PHGDH-220ENST00000641570 ANP32EQ9BTT0 268 aa14.38□□□□□ -0.11
PHGDH-220ENST00000641570 NIFKQ9BYG3 293 aaKnown RBP14.38□□□□□ -0.11
PHGDH-220ENST00000641570 SENP6Q9GZR1 1112 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-220ENST00000641570 SUGCTQ9HAC7 445 aa14.38□□□□□ -0.11
PHGDH-220ENST00000641570 EXOC1Q9NV70 894 aa14.38□□□□□ -0.11
PHGDH-220ENST00000641570 TUBE1Q9UJT0 475 aa14.38□□□□□ -0.11
PHGDH-220ENST00000641570 PHF24Q9UPV7 400 aa14.38□□□□□ -0.11
PHGDH-220ENST00000641570 AKT3Q9Y243 479 aa14.38□□□□□ -0.11
PHGDH-220ENST00000641570 TELO2Q9Y4R8 837 aa14.38□□□□□ -0.11
PHGDH-220ENST00000641570 GTPBP6O43824 516 aaPredicted RBP14.37□□□□□ -0.11
PHGDH-220ENST00000641570 ZNF862O60290 1169 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 TRAK2O60296 914 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 SMTNP53814 917 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 NPEPPSP55786 919 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 PSMC6P62333 389 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 RAD51AP2Q09MP3 1159 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 DMP1Q13316 513 aaPredicted RBP14.37□□□□□ -0.11
PHGDH-220ENST00000641570 TFDP1Q14186 410 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 CAMK4Q16566 473 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 ECM1Q16610 540 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 NBPF20Q3BBV1 942 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 CAVIN1Q6NZI2 390 aaKnown RBP14.37□□□□□ -0.11
PHGDH-220ENST00000641570 STXBP4Q6ZWJ1 553 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 ANO5Q75V66 913 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 MAEAQ7L5Y9 396 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 DYMQ7RTS9 669 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 NECAB2Q7Z6G3 386 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 KIFAP3Q92845 792 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 PAGE5Q96GU1 130 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 GTPBP4Q9BZE4 634 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms