RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 EDIL3O43854 480 aa22.74■■□□□ 1.23
CLN6-222ENST00000637667 DGKIO75912 1065 aa22.74■■□□□ 1.23
CLN6-222ENST00000637667 C22orf31O95567 290 aa22.74■■□□□ 1.23
CLN6-222ENST00000637667 USP11P51784 963 aa22.74■■□□□ 1.23
CLN6-222ENST00000637667 BTG3Q14201 252 aaPredicted RBP22.74■■□□□ 1.23
CLN6-222ENST00000637667 NPAS4Q8IUM7 802 aa22.74■■□□□ 1.23
CLN6-222ENST00000637667 BANK1Q8NDB2 785 aa22.74■■□□□ 1.23
CLN6-222ENST00000637667 CLP1Q92989 425 aaKnown RBP22.74■■□□□ 1.23
CLN6-222ENST00000637667 GABBR1Q9UBS5 961 aa22.74■■□□□ 1.23
CLN6-222ENST00000637667 WDR64B1ANS9 1081 aa22.73■■□□□ 1.23
CLN6-222ENST00000637667 TMEM266Q2M3C6 531 aa22.73■■□□□ 1.23
CLN6-222ENST00000637667 CRIPAKQ8N1N5 446 aa22.73■■□□□ 1.23
CLN6-222ENST00000637667 C11orf84Q9BUA3 381 aaPredicted RBP22.73■■□□□ 1.23
CLN6-222ENST00000637667 TMX1Q9H3N1 280 aa22.73■■□□□ 1.23
CLN6-222ENST00000637667 CDHR5Q9HBB8 845 aa22.73■■□□□ 1.23
CLN6-222ENST00000637667 PDRG1Q9NUG6 133 aa22.73■■□□□ 1.23
CLN6-222ENST00000637667 PCDHA4Q9UN74 947 aa22.73■■□□□ 1.23
CLN6-222ENST00000637667 SAMM50Q9Y512 469 aa22.73■■□□□ 1.23
CLN6-222ENST00000637667 MSH4O15457 936 aa22.72■■□□□ 1.23
CLN6-222ENST00000637667 DEXIO95424 95 aa22.72■■□□□ 1.23
CLN6-222ENST00000637667 STAG3L1P0CL83 205 aa22.72■■□□□ 1.23
CLN6-222ENST00000637667 KCNA5P22460 613 aa22.72■■□□□ 1.23
CLN6-222ENST00000637667 NFX1Q12986 1120 aaKnown RBP22.72■■□□□ 1.23
CLN6-222ENST00000637667 TCEAL5Q5H9L2 206 aa22.72■■□□□ 1.23
CLN6-222ENST00000637667 CPLX2Q6PUV4 134 aaKnown RBP22.72■■□□□ 1.23
CLN6-222ENST00000637667 TRMT1LQ7Z2T5 733 aaKnown RBP22.72■■□□□ 1.23
CLN6-222ENST00000637667 FAM167AQ96KS9 214 aa22.72■■□□□ 1.23
CLN6-222ENST00000637667 C22orf23Q9BZE7 217 aa22.72■■□□□ 1.23
CLN6-222ENST00000637667 ERVK-5Q9HDB9 667 aa22.72■■□□□ 1.23
CLN6-222ENST00000637667 NOC2LQ9Y3T9 749 aaKnown RBP22.72■■□□□ 1.23
CLN6-222ENST00000637667 GAS7O60861 476 aa22.71■■□□□ 1.23
CLN6-222ENST00000637667 RPS6KA5O75582 802 aa22.71■■□□□ 1.23
CLN6-222ENST00000637667 STK3Q13188 491 aa22.71■■□□□ 1.23
CLN6-222ENST00000637667 LEXMQ3ZCV2 418 aa22.71■■□□□ 1.23
CLN6-222ENST00000637667 FAM43BQ6ZT52 329 aaPredicted RBP22.71■■□□□ 1.23
CLN6-222ENST00000637667 CMTR2Q8IYT2 770 aaKnown RBP22.71■■□□□ 1.23
CLN6-222ENST00000637667 METTL13Q8N6R0 699 aa22.71■■□□□ 1.23
CLN6-222ENST00000637667 TBCKQ8TEA7 893 aa22.71■■□□□ 1.23
CLN6-222ENST00000637667 TMEM40Q8WWA1 233 aa22.71■■□□□ 1.23
CLN6-222ENST00000637667 SLC5A5Q92911 643 aa22.71■■□□□ 1.23
CLN6-222ENST00000637667 RIT2Q99578 217 aa22.71■■□□□ 1.23
CLN6-222ENST00000637667 LMAN2LQ9H0V9 348 aa22.71■■□□□ 1.23
CLN6-222ENST00000637667 NSUN3Q9H649 340 aaKnown RBP22.71■■□□□ 1.23
CLN6-222ENST00000637667 DISC1Q9NRI5 854 aa22.71■■□□□ 1.23
CLN6-222ENST00000637667 CEP131Q9UPN4 1083 aa22.71■■□□□ 1.23
CLN6-222ENST00000637667 GRM6O15303 877 aa22.7■■□□□ 1.22
CLN6-222ENST00000637667 BLIDQ8IZY5 108 aa22.7■■□□□ 1.22
CLN6-222ENST00000637667 FAM177A1Q8N128 213 aaPredicted RBP22.7■■□□□ 1.22
CLN6-222ENST00000637667 PPP1R16BQ96T49 567 aa22.7■■□□□ 1.22
CLN6-222ENST00000637667 PLVAPQ9BX97 442 aa22.7■■□□□ 1.22
CLN6-222ENST00000637667 MRPL42Q9Y6G3 142 aaKnown RBP22.7■■□□□ 1.22
CLN6-222ENST00000637667 MAGEB2O15479 319 aa22.69■■□□□ 1.22
CLN6-222ENST00000637667 ZNF862O60290 1169 aa22.69■■□□□ 1.22
CLN6-222ENST00000637667 MGEA5O60502 916 aa22.69■■□□□ 1.22
CLN6-222ENST00000637667 VTNP04004 478 aa22.69■■□□□ 1.22
CLN6-222ENST00000637667 CRYBB1P53674 252 aaPredicted RBP22.69■■□□□ 1.22
CLN6-222ENST00000637667 KIZQ2M2Z5 673 aa22.69■■□□□ 1.22
CLN6-222ENST00000637667 ODR4Q5SWX8 454 aa22.69■■□□□ 1.22
CLN6-222ENST00000637667 LRCH2Q5VUJ6 765 aa22.69■■□□□ 1.22
CLN6-222ENST00000637667 DAGLBQ8NCG7 672 aa22.69■■□□□ 1.22
CLN6-222ENST00000637667 AIFM3Q96NN9 605 aa22.69■■□□□ 1.22
CLN6-222ENST00000637667 TEKT3Q9BXF9 490 aa22.69■■□□□ 1.22
CLN6-222ENST00000637667 LRFN2Q9ULH4 789 aa22.69■■□□□ 1.22
CLN6-222ENST00000637667 ST3GAL5Q9UNP4 418 aa22.69■■□□□ 1.22
CLN6-222ENST00000637667 RALGAPA2Q2PPJ7 1873 aa22.68■■□□□ 1.22
CLN6-222ENST00000637667 M0R2N6 131 aa22.68■■□□□ 1.22
CLN6-222ENST00000637667 GPR182O15218 404 aa22.68■■□□□ 1.22
CLN6-222ENST00000637667 CHMP2AO43633 222 aa22.68■■□□□ 1.22
CLN6-222ENST00000637667 OATP04181 439 aa22.68■■□□□ 1.22
CLN6-222ENST00000637667 SFNP31947 248 aa22.68■■□□□ 1.22
CLN6-222ENST00000637667 SARSP49591 514 aaKnown RBP22.68■■□□□ 1.22
CLN6-222ENST00000637667 CLCN3P51790 818 aa22.68■■□□□ 1.22
CLN6-222ENST00000637667 JAK3P52333 1124 aa22.68■■□□□ 1.22
CLN6-222ENST00000637667 PRKCEQ02156 737 aa22.68■■□□□ 1.22
CLN6-222ENST00000637667 COL19A1Q14993 1142 aa22.68■■□□□ 1.22
CLN6-222ENST00000637667 NPY5RQ15761 445 aa22.68■■□□□ 1.22
CLN6-222ENST00000637667 Q4G0T1 1027 aa22.68■■□□□ 1.22
CLN6-222ENST00000637667 PAN2Q504Q3 1202 aaKnown RBP22.68■■□□□ 1.22
CLN6-222ENST00000637667 GALNT17Q6IS24 598 aa22.68■■□□□ 1.22
CLN6-222ENST00000637667 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.68■■□□□ 1.22
CLN6-222ENST00000637667 GJA10Q969M2 543 aa22.68■■□□□ 1.22
CLN6-222ENST00000637667 OSMRQ99650 979 aa22.68■■□□□ 1.22
CLN6-222ENST00000637667 UNC45AQ9H3U1 944 aa22.68■■□□□ 1.22
CLN6-222ENST00000637667 NRBP2Q9NSY0 501 aa22.68■■□□□ 1.22
CLN6-222ENST00000637667 NLRC5Q86WI3 1866 aa22.68■■□□□ 1.22
CLN6-222ENST00000637667 MYH9P35579 1960 aaKnown RBP22.67■■□□□ 1.22
CLN6-222ENST00000637667 CYP3A7-CYP3A51PA0A087WV96 503 aa22.67■■□□□ 1.22
CLN6-222ENST00000637667 DENND3A2RUS2 1198 aa22.67■■□□□ 1.22
CLN6-222ENST00000637667 GPR32O75388 356 aa22.67■■□□□ 1.22
CLN6-222ENST00000637667 TDP2O95551 362 aa22.67■■□□□ 1.22
CLN6-222ENST00000637667 IBSPP21815 317 aaPredicted RBP22.67■■□□□ 1.22
CLN6-222ENST00000637667 CYP3A7P24462 503 aa22.67■■□□□ 1.22
CLN6-222ENST00000637667 NEK9Q8TD19 979 aa22.67■■□□□ 1.22
CLN6-222ENST00000637667 PABPC5Q96DU9 382 aaKnown RBP22.67■■□□□ 1.22
CLN6-222ENST00000637667 MAP7D2Q96T17 732 aa22.67■■□□□ 1.22
CLN6-222ENST00000637667 ADAM2Q99965 735 aa22.67■■□□□ 1.22
CLN6-222ENST00000637667 C1orf112Q9NSG2 853 aa22.67■■□□□ 1.22
CLN6-222ENST00000637667 EVPLQ92817 2033 aa22.67■■□□□ 1.22
CLN6-222ENST00000637667 PSMD10O75832 226 aa22.66■■□□□ 1.22
CLN6-222ENST00000637667 CDKL5O76039 1030 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms