RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.82□□□□□ -0.36
LINC00538-201ENST00000626109 GTPBP10A4D1E9 387 aaKnown RBP12.82□□□□□ -0.36
LINC00538-201ENST00000626109 KIF28PB7ZC32 967 aa12.82□□□□□ -0.36
LINC00538-201ENST00000626109 IGF2BP3O00425 579 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC00538-201ENST00000626109 PRPF3O43395 683 aaKnown RBP12.82□□□□□ -0.36
LINC00538-201ENST00000626109 KIF1CO43896 1103 aaKnown RBP12.82□□□□□ -0.36
LINC00538-201ENST00000626109 CUTAO60888 179 aa12.82□□□□□ -0.36
LINC00538-201ENST00000626109 TNFAIP3P21580 790 aa12.82□□□□□ -0.36
LINC00538-201ENST00000626109 U2AF2P26368 475 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC00538-201ENST00000626109 MAP2K2P36507 400 aa12.82□□□□□ -0.36
LINC00538-201ENST00000626109 KCNJ6P48051 423 aa12.82□□□□□ -0.36
LINC00538-201ENST00000626109 SNX16P57768 344 aa12.82□□□□□ -0.36
LINC00538-201ENST00000626109 HERVK_113P62684 666 aa12.82□□□□□ -0.36
LINC00538-201ENST00000626109 SLC35G1Q2M3R5 365 aa12.82□□□□□ -0.36
LINC00538-201ENST00000626109 FAM133BQ5BKY9 247 aaKnown RBP12.82□□□□□ -0.36
LINC00538-201ENST00000626109 ZNF449Q6P9G9 518 aa12.82□□□□□ -0.36
LINC00538-201ENST00000626109 KIAA0907Q7Z7F0 614 aaPredicted RBP12.82□□□□□ -0.36
LINC00538-201ENST00000626109 IQCF2Q8IXL9 164 aa12.82□□□□□ -0.36
LINC00538-201ENST00000626109 ELOA2Q8IYF1 753 aaPredicted RBP12.82□□□□□ -0.36
LINC00538-201ENST00000626109 ZNF713Q8N859 430 aaPredicted RBP12.82□□□□□ -0.36
LINC00538-201ENST00000626109 KIF18AQ8NI77 898 aa12.82□□□□□ -0.36
LINC00538-201ENST00000626109 PIGSQ96S52 555 aa12.82□□□□□ -0.36
LINC00538-201ENST00000626109 P2RX7Q99572 595 aaKnown RBP12.82□□□□□ -0.36
LINC00538-201ENST00000626109 V9GY48 417 aaPredicted RBP12.82□□□□□ -0.36
LINC00538-201ENST00000626109 FAM237AA0A1B0GTK4 181 aa12.81□□□□□ -0.36
LINC00538-201ENST00000626109 ZBTB5O15062 677 aa12.81□□□□□ -0.36
LINC00538-201ENST00000626109 NBNO60934 754 aa12.81□□□□□ -0.36
LINC00538-201ENST00000626109 DEXIO95424 95 aa12.81□□□□□ -0.36
LINC00538-201ENST00000626109 CCDC175P0C221 793 aa12.81□□□□□ -0.36
LINC00538-201ENST00000626109 SFPQP23246 707 aaKnown RBP eCLIP12.81□□□□□ -0.36
LINC00538-201ENST00000626109 TRPC1P48995 793 aa12.81□□□□□ -0.36
LINC00538-201ENST00000626109 TAF1CQ15572 869 aaPredicted RBP12.81□□□□□ -0.36
LINC00538-201ENST00000626109 DPCR1Q3MIW9 517 aa12.81□□□□□ -0.36
LINC00538-201ENST00000626109 HSP90B2PQ58FF3 399 aa12.81□□□□□ -0.36
LINC00538-201ENST00000626109 PPP4R3AQ6IN85 833 aa12.81□□□□□ -0.36
LINC00538-201ENST00000626109 CCAR2Q8N163 923 aaKnown RBP12.81□□□□□ -0.36
LINC00538-201ENST00000626109 MB21D1Q8N884 522 aa12.81□□□□□ -0.36
LINC00538-201ENST00000626109 MTMR8Q96EF0 704 aa12.81□□□□□ -0.36
LINC00538-201ENST00000626109 SLX1AQ9BQ83 275 aa12.81□□□□□ -0.36
LINC00538-201ENST00000626109 MRGBPQ9NV56 204 aa12.81□□□□□ -0.36
LINC00538-201ENST00000626109 ZIM2Q9NZV7 527 aa12.81□□□□□ -0.36
LINC00538-201ENST00000626109 SUN2Q9UH99 717 aa12.81□□□□□ -0.36
LINC00538-201ENST00000626109 PNMA6FA0A0J9YX94 578 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 hCG_1642624A0A1W2PR95 340 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 VWA5AO00534 786 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 SNX2O60749 519 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 CAPN15O75808 1086 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 ALDH1A1P00352 501 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 CYP2C8P10632 490 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 NCAM1P13591 858 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 GLULP15104 373 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 MARCKSP29966 332 aaPredicted RBP12.8□□□□□ -0.36
LINC00538-201ENST00000626109 NEK3P51956 506 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 SNAP25P60880 206 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 CCZ1BP86790 482 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 CCZ1P86791 482 aaPredicted RBP12.8□□□□□ -0.36
LINC00538-201ENST00000626109 MCL1Q07820 350 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 TRAF1Q13077 416 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 QRICH1Q2TAL8 776 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 TKFCQ3LXA3 575 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 PRPF38BQ5VTL8 546 aaKnown RBP12.8□□□□□ -0.36
LINC00538-201ENST00000626109 LBX2Q6XYB7 198 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 DEPDC4Q8N2C3 294 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 SLC38A10Q9HBR0 1119 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 IFNKQ9P0W0 207 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 TUBE1Q9UJT0 475 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 ADAMTS5Q9UNA0 930 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 HPSEQ9Y251 543 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 GCLCP48506 637 aaPredicted RBP12.8□□□□□ -0.36
LINC00538-201ENST00000626109 MORC3Q14149 939 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 RESP18Q5W5W9 173 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 MAATS1Q7Z4T9 603 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 ERCC4Q92889 916 aaPredicted RBP12.8□□□□□ -0.36
LINC00538-201ENST00000626109 SH3KBP1Q96B97 665 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 IKBKGQ9Y6K9 419 aa12.8□□□□□ -0.36
LINC00538-201ENST00000626109 THSD7BQ9C0I4 1608 aa12.79□□□□□ -0.36
LINC00538-201ENST00000626109 PARP14Q460N5 1801 aa12.79□□□□□ -0.36
LINC00538-201ENST00000626109 BIN1O00499 593 aa12.79□□□□□ -0.36
LINC00538-201ENST00000626109 INMTO95050 263 aa12.79□□□□□ -0.36
LINC00538-201ENST00000626109 SCG2P13521 617 aa12.79□□□□□ -0.36
LINC00538-201ENST00000626109 ATF4P18848 351 aaPredicted RBP12.79□□□□□ -0.36
LINC00538-201ENST00000626109 SARSP49591 514 aaKnown RBP12.79□□□□□ -0.36
LINC00538-201ENST00000626109 OAZ1P54368 228 aa12.79□□□□□ -0.36
LINC00538-201ENST00000626109 PFKFB3Q16875 520 aaPredicted RBP12.79□□□□□ -0.36
LINC00538-201ENST00000626109 TMC6Q7Z403 805 aa12.79□□□□□ -0.36
LINC00538-201ENST00000626109 HEATR3Q7Z4Q2 680 aa12.79□□□□□ -0.36
LINC00538-201ENST00000626109 FBXO11Q86XK2 927 aa12.79□□□□□ -0.36
LINC00538-201ENST00000626109 OR8H2Q8N162 312 aa12.79□□□□□ -0.36
LINC00538-201ENST00000626109 AMNQ9BXJ7 453 aa12.79□□□□□ -0.36
LINC00538-201ENST00000626109 ZFYVE28Q9HCC9 887 aa12.79□□□□□ -0.36
LINC00538-201ENST00000626109 CEP131Q9UPN4 1083 aa12.79□□□□□ -0.36
LINC00538-201ENST00000626109 RLFQ13129 1914 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 ICAM1P05362 532 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 CNGA1P29973 690 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 HALP42357 657 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 MYL5Q02045 173 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 SFSWAPQ12872 951 aaKnown RBP12.78□□□□□ -0.36
LINC00538-201ENST00000626109 PTPAQ15257 358 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 WDR45BQ5MNZ6 344 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 KIAA1614Q5VZ46 1190 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms