RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 ZMYM2Q9UBW7 1377 aa21.67■■□□□ 1.06
TREX1-205ENST00000625293 RASAL3Q86YV0 1011 aa21.66■■□□□ 1.06
TREX1-205ENST00000625293 DAW1Q8N136 415 aa21.66■■□□□ 1.06
TREX1-205ENST00000625293 MYCT1Q8N699 235 aa21.66■■□□□ 1.06
TREX1-205ENST00000625293 A1CFQ9NQ94 594 aaKnown RBP21.66■■□□□ 1.06
TREX1-205ENST00000625293 REXO2Q9Y3B8 237 aaKnown RBP21.66■■□□□ 1.06
TREX1-205ENST00000625293 EPN1Q9Y6I3 576 aaPredicted RBP21.66■■□□□ 1.06
TREX1-205ENST00000625293 UBE4BO95155 1302 aa21.66■■□□□ 1.06
TREX1-205ENST00000625293 ARHGEF35A5YM69 484 aa21.66■■□□□ 1.06
TREX1-205ENST00000625293 NDUFA10O95299 355 aa21.66■■□□□ 1.06
TREX1-205ENST00000625293 CCNE2O96020 404 aa21.66■■□□□ 1.06
TREX1-205ENST00000625293 NMT1P30419 496 aaKnown RBP21.66■■□□□ 1.06
TREX1-205ENST00000625293 QARSP47897 775 aaKnown RBP21.66■■□□□ 1.06
TREX1-205ENST00000625293 NFIL3Q16649 462 aa21.66■■□□□ 1.06
TREX1-205ENST00000625293 TREML2Q5T2D2 321 aa21.66■■□□□ 1.06
TREX1-205ENST00000625293 CNKSR2Q8WXI2 1034 aa21.66■■□□□ 1.06
TREX1-205ENST00000625293 WDR24Q96S15 920 aa21.66■■□□□ 1.06
TREX1-205ENST00000625293 FAM184BQ9ULE4 1060 aa21.66■■□□□ 1.06
TREX1-205ENST00000625293 LOXHD1Q8IVV2 1947 aa21.66■■□□□ 1.06
TREX1-205ENST00000625293 MAFGO15525 162 aa21.65■■□□□ 1.06
TREX1-205ENST00000625293 TGFB1I1O43294 461 aa21.65■■□□□ 1.06
TREX1-205ENST00000625293 ERCC3P19447 782 aa21.65■■□□□ 1.06
TREX1-205ENST00000625293 JAK3P52333 1124 aa21.65■■□□□ 1.06
TREX1-205ENST00000625293 KRT76Q01546 638 aa21.65■■□□□ 1.06
TREX1-205ENST00000625293 KCNA1Q09470 495 aa21.65■■□□□ 1.06
TREX1-205ENST00000625293 TSR1Q2NL82 804 aaKnown RBP21.65■■□□□ 1.06
TREX1-205ENST00000625293 ZNF720Q7Z2F6 126 aa21.65■■□□□ 1.06
TREX1-205ENST00000625293 FRMD5Q7Z6J6 570 aa21.65■■□□□ 1.06
TREX1-205ENST00000625293 NSUN6Q8TEA1 469 aaKnown RBP21.65■■□□□ 1.06
TREX1-205ENST00000625293 SENP7Q9BQF6 1050 aa21.65■■□□□ 1.06
TREX1-205ENST00000625293 STRA6Q9BX79 667 aa21.65■■□□□ 1.06
TREX1-205ENST00000625293 EDEM3Q9BZQ6 932 aa21.65■■□□□ 1.06
TREX1-205ENST00000625293 A0A0G2JMZ2 1700 aa21.65■■□□□ 1.06
TREX1-205ENST00000625293 TESPA1A2RU30 521 aaPredicted RBP21.64■■□□□ 1.06
TREX1-205ENST00000625293 RGS20O76081 388 aa21.64■■□□□ 1.06
TREX1-205ENST00000625293 SLC10A3P09131 477 aa21.64■■□□□ 1.06
TREX1-205ENST00000625293 SFNP31947 248 aa21.64■■□□□ 1.06
TREX1-205ENST00000625293 ARHGAP25P42331 645 aa21.64■■□□□ 1.06
TREX1-205ENST00000625293 IREB2P48200 963 aaKnown RBP21.64■■□□□ 1.06
TREX1-205ENST00000625293 RARRES1P49788 294 aa21.64■■□□□ 1.06
TREX1-205ENST00000625293 GNG11P61952 73 aa21.64■■□□□ 1.06
TREX1-205ENST00000625293 PADI6Q6TGC4 694 aa21.64■■□□□ 1.06
TREX1-205ENST00000625293 LBX2Q6XYB7 198 aa21.64■■□□□ 1.06
TREX1-205ENST00000625293 C4orf19Q8IY42 314 aa21.64■■□□□ 1.06
TREX1-205ENST00000625293 CCDC155Q8N6L0 562 aa21.64■■□□□ 1.06
TREX1-205ENST00000625293 ZNF397Q8NF99 534 aaPredicted RBP21.64■■□□□ 1.06
TREX1-205ENST00000625293 RDM1Q8NG50 284 aa21.64■■□□□ 1.06
TREX1-205ENST00000625293 SMCR8Q8TEV9 937 aaPredicted RBP21.64■■□□□ 1.06
TREX1-205ENST00000625293 BAP1Q92560 729 aa21.64■■□□□ 1.06
TREX1-205ENST00000625293 SLC10A4Q96EP9 437 aa21.64■■□□□ 1.06
TREX1-205ENST00000625293 FAM207AQ9NSI2 230 aaPredicted RBP21.64■■□□□ 1.06
TREX1-205ENST00000625293 PLAGL2Q9UPG8 496 aa21.64■■□□□ 1.06
TREX1-205ENST00000625293 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.64■■□□□ 1.06
TREX1-205ENST00000625293 CSADQ9Y600 493 aa21.64■■□□□ 1.06
TREX1-205ENST00000625293 PTPRFP10586 1907 aa21.64■■□□□ 1.06
TREX1-205ENST00000625293 WDR64B1ANS9 1081 aa21.64■■□□□ 1.05
TREX1-205ENST00000625293 SLC16A3O15427 465 aaKnown RBP21.64■■□□□ 1.05
TREX1-205ENST00000625293 HIP1RO75146 1068 aa21.64■■□□□ 1.05
TREX1-205ENST00000625293 NR3C1P04150 777 aa21.64■■□□□ 1.05
TREX1-205ENST00000625293 UGCGQ16739 394 aa21.64■■□□□ 1.05
TREX1-205ENST00000625293 NLRX1Q86UT6 975 aa21.64■■□□□ 1.05
TREX1-205ENST00000625293 MMRN2Q9H8L6 949 aa21.64■■□□□ 1.05
TREX1-205ENST00000625293 ELP3Q9H9T3 547 aa21.64■■□□□ 1.05
TREX1-205ENST00000625293 LZTFL1Q9NQ48 299 aa21.64■■□□□ 1.05
TREX1-205ENST00000625293 PPP1R37O75864 691 aa21.63■■□□□ 1.05
TREX1-205ENST00000625293 KCNA2P16389 499 aa21.63■■□□□ 1.05
TREX1-205ENST00000625293 GJA5P36382 358 aa21.63■■□□□ 1.05
TREX1-205ENST00000625293 ZNF746Q6NUN9 644 aaPredicted RBP21.63■■□□□ 1.05
TREX1-205ENST00000625293 ZNF710Q8N1W2 664 aa21.63■■□□□ 1.05
TREX1-205ENST00000625293 CHST13Q8NET6 341 aa21.63■■□□□ 1.05
TREX1-205ENST00000625293 CCDC102AQ96A19 550 aa21.63■■□□□ 1.05
TREX1-205ENST00000625293 ZNHIT6Q9NWK9 470 aaKnown RBP21.63■■□□□ 1.05
TREX1-205ENST00000625293 ZNF215Q9UL58 517 aaPredicted RBP21.63■■□□□ 1.05
TREX1-205ENST00000625293 AKAP3O75969 853 aa21.62■■□□□ 1.05
TREX1-205ENST00000625293 SLU7O95391 586 aaKnown RBP21.62■■□□□ 1.05
TREX1-205ENST00000625293 ZC2HC1CQ53FD0 456 aaPredicted RBP21.62■■□□□ 1.05
TREX1-205ENST00000625293 FAM178BQ8IXR5 827 aa21.62■■□□□ 1.05
TREX1-205ENST00000625293 CCDC170Q8IYT3 715 aa21.62■■□□□ 1.05
TREX1-205ENST00000625293 IRX2Q9BZI1 471 aaPredicted RBP21.62■■□□□ 1.05
TREX1-205ENST00000625293 SAMM50Q9Y512 469 aa21.62■■□□□ 1.05
TREX1-205ENST00000625293 A0A0G2JLL6 359 aaPredicted RBP21.61■■□□□ 1.05
TREX1-205ENST00000625293 STAM2O75886 525 aa21.61■■□□□ 1.05
TREX1-205ENST00000625293 NOL4O94818 638 aa21.61■■□□□ 1.05
TREX1-205ENST00000625293 RPL13P26373 211 aaKnown RBP21.61■■□□□ 1.05
TREX1-205ENST00000625293 YWHABP31946 246 aaKnown RBP21.61■■□□□ 1.05
TREX1-205ENST00000625293 PSMC5P62195 406 aa21.61■■□□□ 1.05
TREX1-205ENST00000625293 PPP2R3AQ06190 1150 aa21.61■■□□□ 1.05
TREX1-205ENST00000625293 PPATQ06203 517 aa21.61■■□□□ 1.05
TREX1-205ENST00000625293 ODR4Q5SWX8 454 aa21.61■■□□□ 1.05
TREX1-205ENST00000625293 ZNF662Q6ZS27 426 aa21.61■■□□□ 1.05
TREX1-205ENST00000625293 PRRT2Q7Z6L0 340 aaPredicted RBP21.61■■□□□ 1.05
TREX1-205ENST00000625293 ANKRD13AQ8IZ07 590 aa21.61■■□□□ 1.05
TREX1-205ENST00000625293 NEK11Q8NG66 645 aa21.61■■□□□ 1.05
TREX1-205ENST00000625293 NHEJ1Q9H9Q4 299 aaPredicted RBP21.61■■□□□ 1.05
TREX1-205ENST00000625293 NFASCO94856 1347 aa21.61■■□□□ 1.05
TREX1-205ENST00000625293 MAPTP10636 758 aaKnown RBP21.61■■□□□ 1.05
TREX1-205ENST00000625293 CASQ1P31415 396 aa21.61■■□□□ 1.05
TREX1-205ENST00000625293 HERVK_113P62684 666 aa21.61■■□□□ 1.05
TREX1-205ENST00000625293 NCBP1Q09161 790 aaKnown RBP21.61■■□□□ 1.05
TREX1-205ENST00000625293 PLS1Q14651 629 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms