RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 MRPS5P82675 430 aaKnown RBP19.4■□□□□ 0.7
HMGN3-203ENST00000620514 TFF2Q03403 129 aa19.4■□□□□ 0.7
HMGN3-203ENST00000620514 NONOQ15233 471 aaKnown RBP eCLIP19.4■□□□□ 0.7
HMGN3-203ENST00000620514 UGCGQ16739 394 aa19.4■□□□□ 0.7
HMGN3-203ENST00000620514 INF2Q27J81 1249 aa19.4■□□□□ 0.7
HMGN3-203ENST00000620514 TMEM266Q2M3C6 531 aa19.4■□□□□ 0.7
HMGN3-203ENST00000620514 LRCH2Q5VUJ6 765 aa19.4■□□□□ 0.7
HMGN3-203ENST00000620514 GALNT17Q6IS24 598 aa19.4■□□□□ 0.7
HMGN3-203ENST00000620514 FAM177A1Q8N128 213 aaPredicted RBP19.4■□□□□ 0.7
HMGN3-203ENST00000620514 NECAB1Q8N987 351 aa19.4■□□□□ 0.7
HMGN3-203ENST00000620514 PPP1R16BQ96T49 567 aa19.4■□□□□ 0.7
HMGN3-203ENST00000620514 TEKT3Q9BXF9 490 aa19.4■□□□□ 0.7
HMGN3-203ENST00000620514 TSPYL2Q9H2G4 693 aaPredicted RBP19.4■□□□□ 0.7
HMGN3-203ENST00000620514 LOXHD1Q8IVV2 1947 aa19.4■□□□□ 0.7
HMGN3-203ENST00000620514 STK36Q9NRP7 1315 aa19.4■□□□□ 0.7
HMGN3-203ENST00000620514 KDM3AQ9Y4C1 1321 aa19.4■□□□□ 0.7
HMGN3-203ENST00000620514 VCANP13611 3396 aa19.4■□□□□ 0.7
HMGN3-203ENST00000620514 MYH9P35579 1960 aaKnown RBP19.39■□□□□ 0.7
HMGN3-203ENST00000620514 PSMD10O75832 226 aa19.39■□□□□ 0.69
HMGN3-203ENST00000620514 ANKRD1Q15327 319 aa19.39■□□□□ 0.69
HMGN3-203ENST00000620514 ME3Q16798 604 aa19.39■□□□□ 0.69
HMGN3-203ENST00000620514 EPC2Q52LR7 807 aa19.39■□□□□ 0.69
HMGN3-203ENST00000620514 KRT25Q7Z3Z0 450 aa19.39■□□□□ 0.69
HMGN3-203ENST00000620514 OXER1Q8TDS5 423 aa19.39■□□□□ 0.69
HMGN3-203ENST00000620514 MBOAT7Q96N66 472 aa19.39■□□□□ 0.69
HMGN3-203ENST00000620514 RC3H2Q9HBD1 1191 aaKnown RBP19.39■□□□□ 0.69
HMGN3-203ENST00000620514 ORC3Q9UBD5 711 aaPredicted RBP19.39■□□□□ 0.69
HMGN3-203ENST00000620514 COL4A6Q14031 1691 aa19.39■□□□□ 0.69
HMGN3-203ENST00000620514 REV3LO60673 3130 aa19.38■□□□□ 0.69
HMGN3-203ENST00000620514 SLC37A4O43826 429 aa19.38■□□□□ 0.69
HMGN3-203ENST00000620514 PAK2Q13177 524 aa19.38■□□□□ 0.69
HMGN3-203ENST00000620514 TMEM192Q8IY95 271 aa19.38■□□□□ 0.69
HMGN3-203ENST00000620514 METTL13Q8N6R0 699 aa19.38■□□□□ 0.69
HMGN3-203ENST00000620514 ETNPPLQ8TBG4 499 aa19.38■□□□□ 0.69
HMGN3-203ENST00000620514 TMEM40Q8WWA1 233 aa19.38■□□□□ 0.69
HMGN3-203ENST00000620514 SYMPKQ92797 1274 aaKnown RBP19.38■□□□□ 0.69
HMGN3-203ENST00000620514 EVPLQ92817 2033 aa19.38■□□□□ 0.69
HMGN3-203ENST00000620514 TMX1Q9H3N1 280 aa19.38■□□□□ 0.69
HMGN3-203ENST00000620514 LMCD1Q9NZU5 365 aa19.38■□□□□ 0.69
HMGN3-203ENST00000620514 NOC2LQ9Y3T9 749 aaKnown RBP19.38■□□□□ 0.69
HMGN3-203ENST00000620514 TTC3P53804 2025 aa19.37■□□□□ 0.69
HMGN3-203ENST00000620514 WDR81Q562E7 1941 aa19.37■□□□□ 0.69
HMGN3-203ENST00000620514 VTNP04004 478 aa19.37■□□□□ 0.69
HMGN3-203ENST00000620514 OATP04181 439 aa19.37■□□□□ 0.69
HMGN3-203ENST00000620514 FDPSP14324 419 aaKnown RBP19.37■□□□□ 0.69
HMGN3-203ENST00000620514 SFNP31947 248 aa19.37■□□□□ 0.69
HMGN3-203ENST00000620514 CLCN3P51790 818 aa19.37■□□□□ 0.69
HMGN3-203ENST00000620514 JAK3P52333 1124 aa19.37■□□□□ 0.69
HMGN3-203ENST00000620514 PRKCEQ02156 737 aa19.37■□□□□ 0.69
HMGN3-203ENST00000620514 NFX1Q12986 1120 aaKnown RBP19.37■□□□□ 0.69
HMGN3-203ENST00000620514 KIZQ2M2Z5 673 aa19.37■□□□□ 0.69
HMGN3-203ENST00000620514 LETM2Q2VYF4 491 aa19.37■□□□□ 0.69
HMGN3-203ENST00000620514 MOXD1Q6UVY6 613 aa19.37■□□□□ 0.69
HMGN3-203ENST00000620514 FIBCD1Q8N539 461 aa19.37■□□□□ 0.69
HMGN3-203ENST00000620514 FAM167AQ96KS9 214 aa19.37■□□□□ 0.69
HMGN3-203ENST00000620514 SAMD11Q96NU1 681 aa19.37■□□□□ 0.69
HMGN3-203ENST00000620514 FTHL17Q9BXU8 183 aa19.37■□□□□ 0.69
HMGN3-203ENST00000620514 ERVK-5Q9HDB9 667 aa19.37■□□□□ 0.69
HMGN3-203ENST00000620514 DDX25Q9UHL0 483 aaKnown RBP19.37■□□□□ 0.69
HMGN3-203ENST00000620514 SPTBN5Q9NRC6 3674 aaKnown RBP19.36■□□□□ 0.69
HMGN3-203ENST00000620514 ADGRA3Q8IWK6 1321 aa19.36■□□□□ 0.69
HMGN3-203ENST00000620514 CCDC194A0A1B0GVG4 234 aa19.36■□□□□ 0.69
HMGN3-203ENST00000620514 MGEA5O60502 916 aa19.36■□□□□ 0.69
HMGN3-203ENST00000620514 LINC00271P0C7V0 271 aa19.36■□□□□ 0.69
HMGN3-203ENST00000620514 NEK4P51957 841 aa19.36■□□□□ 0.69
HMGN3-203ENST00000620514 EARS2Q5JPH6 523 aaKnown RBP19.36■□□□□ 0.69
HMGN3-203ENST00000620514 B3GNT9Q6UX72 402 aa19.36■□□□□ 0.69
HMGN3-203ENST00000620514 MIER3Q7Z3K6 550 aa19.36■□□□□ 0.69
HMGN3-203ENST00000620514 CRIPAKQ8N1N5 446 aa19.36■□□□□ 0.69
HMGN3-203ENST00000620514 GTF3C6Q969F1 213 aa19.36■□□□□ 0.69
HMGN3-203ENST00000620514 ZNF689Q96CS4 500 aaPredicted RBP19.36■□□□□ 0.69
HMGN3-203ENST00000620514 OSMRQ99650 979 aa19.36■□□□□ 0.69
HMGN3-203ENST00000620514 NRBP2Q9NSY0 501 aa19.36■□□□□ 0.69
HMGN3-203ENST00000620514 CEP131Q9UPN4 1083 aa19.36■□□□□ 0.69
HMGN3-203ENST00000620514 TTC28Q96AY4 2481 aa19.35■□□□□ 0.69
HMGN3-203ENST00000620514 FAM205CA6NFA0 338 aa19.35■□□□□ 0.69
HMGN3-203ENST00000620514 H3BNC9 293 aa19.35■□□□□ 0.69
HMGN3-203ENST00000620514 GPR32O75388 356 aa19.35■□□□□ 0.69
HMGN3-203ENST00000620514 RPS6KA5O75582 802 aa19.35■□□□□ 0.69
HMGN3-203ENST00000620514 DGKIO75912 1065 aa19.35■□□□□ 0.69
HMGN3-203ENST00000620514 XBP1P17861 261 aa19.35■□□□□ 0.69
HMGN3-203ENST00000620514 IBSPP21815 317 aaPredicted RBP19.35■□□□□ 0.69
HMGN3-203ENST00000620514 KCNQ1P51787 676 aa19.35■□□□□ 0.69
HMGN3-203ENST00000620514 GPM6BQ13491 265 aa19.35■□□□□ 0.69
HMGN3-203ENST00000620514 EFCAB12Q6NXP0 572 aa19.35■□□□□ 0.69
HMGN3-203ENST00000620514 PIK3AP1Q6ZUJ8 805 aa19.35■□□□□ 0.69
HMGN3-203ENST00000620514 LRRC71Q8N4P6 559 aa19.35■□□□□ 0.69
HMGN3-203ENST00000620514 LINC01465Q8N7H1 131 aa19.35■□□□□ 0.69
HMGN3-203ENST00000620514 NLRC5Q86WI3 1866 aa19.35■□□□□ 0.69
HMGN3-203ENST00000620514 TMEM150BA6NC51 233 aa19.34■□□□□ 0.69
HMGN3-203ENST00000620514 MAGEB2O15479 319 aa19.34■□□□□ 0.69
HMGN3-203ENST00000620514 STBD1O95210 358 aa19.34■□□□□ 0.69
HMGN3-203ENST00000620514 CTNNB1P35222 781 aa19.34■□□□□ 0.69
HMGN3-203ENST00000620514 CRYBB1P53674 252 aaPredicted RBP19.34■□□□□ 0.69
HMGN3-203ENST00000620514 ST3GAL1Q11201 340 aa19.34■□□□□ 0.69
HMGN3-203ENST00000620514 BTG3Q14201 252 aaPredicted RBP19.34■□□□□ 0.69
HMGN3-203ENST00000620514 NEK8Q86SG6 692 aa19.34■□□□□ 0.69
HMGN3-203ENST00000620514 FAM228AQ86W67 206 aa19.34■□□□□ 0.69
HMGN3-203ENST00000620514 NPAS4Q8IUM7 802 aa19.34■□□□□ 0.69
HMGN3-203ENST00000620514 NSUN7Q8NE18 718 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms