RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 ROR2Q01974 943 aaKnown RBP10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 SEPT2Q15019 361 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 SLC18A3Q16572 532 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 CCDC105Q8IYK2 499 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 DNAJC9Q8WXX5 260 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 CTNNBL1Q8WYA6 563 aaPredicted RBP10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 PBKQ96KB5 322 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 NKIRAS1Q9NYS0 192 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 NKX1-2Q9UD57 310 aaPredicted RBP10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 AMFRQ9UKV5 643 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 JAG2Q9Y219 1238 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 C5orf60A6NFR6 353 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 USP17L12C9JPN9 530 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 USP17L21D6R901 530 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 SNX3O60493 162 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 ZCCHC18P0CG32 403 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 GOLGA8HP0CJ92 632 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 SCNN1BP51168 640 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 ITPK1Q13572 414 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 ITIH4Q14624 930 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 ARHGAP22Q7Z5H3 698 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 TRIM74Q86UV6 250 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 TRIM73Q86UV7 250 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 SEPT12Q8IYM1 358 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 GLIS3Q8NEA6 775 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 ERP27Q96DN0 273 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 DDX50Q9BQ39 737 aaKnown RBP10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 A0A1W2PQJ5 194 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 TMEM120BA0PK00 339 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 CCDC160A6NGH7 325 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 KLRC4O43908 158 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 H2AFZP0C0S5 128 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 UBTFL6P0CB48 400 aaPredicted RBP10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 CDK17Q00537 523 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 RASGRF1Q13972 1273 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 EAPPQ56P03 285 aaPredicted RBP10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 H2AFVQ71UI9 128 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 SYT15Q9BQS2 421 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 STMN4Q9H169 189 aaPredicted RBP10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 SLC12A4Q9UP95 1085 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 ASAP2O43150 1006 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 PFDN1O60925 122 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 ENTPD5O75356 428 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 CREB1P16220 341 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 PLCG2P16885 1265 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 RIPK1Q13546 671 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 CAPN12Q6ZSI9 719 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 MFN1Q8IWA4 741 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 ITFG2Q969R8 447 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 DYDC2Q96IM9 177 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 TGS1Q96RS0 853 aaKnown RBP10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 PITPNM3Q9BZ71 974 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 RHBDL2Q9NX52 303 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 TMOD4Q9NZQ9 345 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 RASAL2Q9UJF2 1139 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 SIK3Q9Y2K2 1263 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 NR2E1Q9Y466 385 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 MYH15Q9Y2K3 1946 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 ABCC12Q96J65 1359 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 LAMA4Q16363 1823 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 MAGEB6P1A0A0J9YX57 407 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 RAD21O60216 631 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 SLC5A1P13866 664 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 MRPS35P82673 323 aaKnown RBP10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 PTK2Q05397 1052 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 KCNMA1Q12791 1236 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 C6orf118Q5T5N4 469 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 HHATQ5VTY9 493 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 FITM2Q8N6M3 262 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 BMP2KQ9NSY1 1161 aaPredicted RBP10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 SRP68Q9UHB9 627 aaKnown RBP10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 SRRM3A6NNA2 597 aaPredicted RBP10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 FESP07332 822 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 NAPAP54920 295 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 DYNLL1P63167 89 aaKnown RBP10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 TRIP13Q15645 432 aaPredicted RBP10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 ANO7Q6IWH7 933 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 SRRM1Q8IYB3 904 aaKnown RBP10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 SPIRE2Q8WWL2 714 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 ZNF317Q96PQ6 595 aaPredicted RBP10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 ARL2BPQ9Y2Y0 163 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 FAM205AQ6ZU69 1335 aa10.57□□□□□ -0.72
TNFAIP3-210ENST00000620204 SSU72P8A0A1W2PR75 194 aa10.56□□□□□ -0.72
TNFAIP3-210ENST00000620204 FLOT1O75955 427 aa10.56□□□□□ -0.72
TNFAIP3-210ENST00000620204 PDE8BO95263 885 aa10.56□□□□□ -0.72
TNFAIP3-210ENST00000620204 USP11P51784 963 aa10.56□□□□□ -0.72
TNFAIP3-210ENST00000620204 BARGINQ6ZT62 677 aa10.56□□□□□ -0.72
TNFAIP3-210ENST00000620204 TMTC3Q6ZXV5 915 aa10.56□□□□□ -0.72
TNFAIP3-210ENST00000620204 ZNF572Q7Z3I7 529 aaPredicted RBP10.56□□□□□ -0.72
TNFAIP3-210ENST00000620204 GBP7Q8N8V2 638 aaPredicted RBP10.56□□□□□ -0.72
TNFAIP3-210ENST00000620204 KIAA0895Q8NCT3 520 aa10.56□□□□□ -0.72
TNFAIP3-210ENST00000620204 PPFIBP2Q8ND30 876 aa10.56□□□□□ -0.72
TNFAIP3-210ENST00000620204 BAP1Q92560 729 aa10.56□□□□□ -0.72
TNFAIP3-210ENST00000620204 TAOK3Q9H2K8 898 aa10.56□□□□□ -0.72
TNFAIP3-210ENST00000620204 CUEDC2Q9H467 287 aa10.56□□□□□ -0.72
TNFAIP3-210ENST00000620204 CHORDC1Q9UHD1 332 aaPredicted RBP10.56□□□□□ -0.72
TNFAIP3-210ENST00000620204 PHLPP1O60346 1717 aa10.56□□□□□ -0.72
TNFAIP3-210ENST00000620204 CCDC188H7C350 402 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms