RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 PCIF1Q9H4Z3 704 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 BSDC1Q9NW68 430 aaPredicted RBP18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 CXCR5P32302 372 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 DYNC1I2Q13409 638 aaKnown RBP18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 FBXL13Q8NEE6 735 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 TRIM55Q9BYV6 548 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 LRFN2Q9ULH4 789 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 BBS9Q3SYG4 887 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 SYT2Q8N9I0 419 aaPredicted RBP18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 KPNA7A9QM74 516 aa18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 CHUKO15111 745 aa18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 SERPINB2P05120 415 aa18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 ELMSAN1Q6PJG2 1045 aa18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 PRPF38AQ8NAV1 312 aaKnown RBP18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 RNF139Q8WU17 664 aa18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 SCG3Q8WXD2 468 aaKnown RBP18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 APOL6Q9BWW8 343 aa18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 CREB3O43889 395 aa18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 NBPF10Q6P3W6 841 aaKnown RBP18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 GRAMD1CQ8IYS0 662 aa18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 MSTO1Q9BUK6 570 aa18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 KRT82Q9NSB4 513 aa18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 MCF2P10911 925 aa18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 TBK1Q9UHD2 729 aa18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 MYO5CQ9NQX4 1742 aa18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 NCF2P19878 526 aaPredicted RBP18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 TMTC4Q5T4D3 741 aa18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 RC3H1Q5TC82 1133 aaKnown RBP18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 CFAP36Q96G28 342 aa18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 GCOM2Q9BZD3 368 aaPredicted RBP18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 CYP26B1Q9NR63 512 aa18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 ZBTB1Q9Y2K1 713 aa18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 MDM2Q00987 491 aaPredicted RBP18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 ZMAT2Q96NC0 199 aaKnown RBP18.66■□□□□ 0.58
HMGXB3-206ENST00000613459 GRAPQ13588 217 aa18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 TBC1D9BQ66K14 1250 aa18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 TBC1D1Q86TI0 1168 aaPredicted RBP18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 GRAPLQ8TC17 118 aaPredicted RBP18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 MAML1Q92585 1016 aa18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 TMEM35BQ8NCS4 154 aa18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 COA7Q96BR5 231 aa18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 PGBD1Q96JS3 809 aa18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 YY1AP1Q9H869 796 aa18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 CTIFO43310 598 aaKnown RBP18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 SORBS3O60504 671 aa18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 MYBL1P10243 752 aa18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 CLEC4GQ6UXB4 293 aa18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 SEL1LQ9UBV2 794 aa18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 PLEKHG2Q9H7P9 1386 aa18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 GGPS1O95749 300 aa18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 MMEP08473 750 aa18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 DYNLT1P63172 113 aa18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 HEXIM2Q96MH2 286 aaKnown RBP18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 SCHIP1Q9P0W5 487 aaPredicted RBP18.65■□□□□ 0.58
HMGXB3-206ENST00000613459 PSMA2P25787 234 aa18.64■□□□□ 0.58
HMGXB3-206ENST00000613459 CDK8P49336 464 aa18.64■□□□□ 0.58
HMGXB3-206ENST00000613459 RNF207Q6ZRF8 634 aa18.64■□□□□ 0.58
HMGXB3-206ENST00000613459 FAM20AQ96MK3 541 aa18.64■□□□□ 0.58
HMGXB3-206ENST00000613459 ASNSD1Q9NWL6 643 aa18.64■□□□□ 0.58
HMGXB3-206ENST00000613459 NXF1Q9UBU9 619 aaKnown RBP18.64■□□□□ 0.58
HMGXB3-206ENST00000613459 SUN2Q9UH99 717 aa18.64■□□□□ 0.58
HMGXB3-206ENST00000613459 NFU1Q9UMS0 254 aa18.64■□□□□ 0.58
HMGXB3-206ENST00000613459 K7ERI5 159 aa18.64■□□□□ 0.57
HMGXB3-206ENST00000613459 FOXP2O15409 715 aa18.64■□□□□ 0.57
HMGXB3-206ENST00000613459 MTERF2Q49AM1 385 aa18.64■□□□□ 0.57
HMGXB3-206ENST00000613459 ZNF667Q5HYK9 610 aa18.64■□□□□ 0.57
HMGXB3-206ENST00000613459 TRIM67Q6ZTA4 783 aa18.64■□□□□ 0.57
HMGXB3-206ENST00000613459 DCLK2Q8N568 766 aa18.64■□□□□ 0.57
HMGXB3-206ENST00000613459 PITPNM3Q9BZ71 974 aa18.64■□□□□ 0.57
HMGXB3-206ENST00000613459 ALDH8A1Q9H2A2 487 aaPredicted RBP18.64■□□□□ 0.57
HMGXB3-206ENST00000613459 H7C1W4 665 aa18.64■□□□□ 0.57
HMGXB3-206ENST00000613459 COPEO14579 308 aa18.64■□□□□ 0.57
HMGXB3-206ENST00000613459 FGGP02679 453 aa18.64■□□□□ 0.57
HMGXB3-206ENST00000613459 IFNA8P32881 189 aa18.64■□□□□ 0.57
HMGXB3-206ENST00000613459 GPC5P78333 572 aa18.64■□□□□ 0.57
HMGXB3-206ENST00000613459 ERFEQ4G0M1 354 aa18.64■□□□□ 0.57
HMGXB3-206ENST00000613459 FGD4Q96M96 766 aa18.64■□□□□ 0.57
HMGXB3-206ENST00000613459 PDXDC2PQ6P474 469 aa18.64■□□□□ 0.57
HMGXB3-206ENST00000613459 SPICE1Q8N0Z3 855 aa18.64■□□□□ 0.57
HMGXB3-206ENST00000613459 FBXO40Q9UH90 709 aa18.64■□□□□ 0.57
HMGXB3-206ENST00000613459 TRPC5Q9UL62 973 aaPredicted RBP18.64■□□□□ 0.57
HMGXB3-206ENST00000613459 SLC7A5Q01650 507 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 PFKFB3Q16875 520 aaPredicted RBP18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 NUGGCQ68CJ6 796 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 OSBPL5Q9H0X9 879 aaPredicted RBP18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 UBN1Q9NPG3 1134 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 METP08581 1390 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 FAM187AA6NFU0 413 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 MEIS1O00470 390 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 HSPA4LO95757 839 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 DDIT3P35638 169 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 CACNB1Q02641 598 aaPredicted RBP18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 FAM196AQ6ZSG2 479 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 MYLK4Q86YV6 388 aaPredicted RBP18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 POLR3CQ9BUI4 534 aaPredicted RBP18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 TBC1D22BQ9NU19 505 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 ABHD10Q9NUJ1 306 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 TRIM33Q9UPN9 1127 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 PRKAB2O43741 272 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms