RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 P2RX5Q93086 422 aa20.18■□□□□ 0.82
SSBP1-215ENST00000612337 LRFN3Q9BTN0 628 aa20.18■□□□□ 0.82
SSBP1-215ENST00000612337 TMX1Q9H3N1 280 aa20.18■□□□□ 0.82
SSBP1-215ENST00000612337 CLDND1Q9NY35 253 aa20.18■□□□□ 0.82
SSBP1-215ENST00000612337 MRPL42Q9Y6G3 142 aaKnown RBP20.18■□□□□ 0.82
SSBP1-215ENST00000612337 MYH9P35579 1960 aaKnown RBP20.17■□□□□ 0.82
SSBP1-215ENST00000612337 EVPLQ92817 2033 aa20.17■□□□□ 0.82
SSBP1-215ENST00000612337 ZBTB42B2RXF5 422 aa20.17■□□□□ 0.82
SSBP1-215ENST00000612337 ATP4AP20648 1035 aa20.17■□□□□ 0.82
SSBP1-215ENST00000612337 RPS6KB1P23443 525 aa20.17■□□□□ 0.82
SSBP1-215ENST00000612337 NTRK3Q16288 839 aa20.17■□□□□ 0.82
SSBP1-215ENST00000612337 TMEM266Q2M3C6 531 aa20.17■□□□□ 0.82
SSBP1-215ENST00000612337 NAALADL2Q58DX5 795 aa20.17■□□□□ 0.82
SSBP1-215ENST00000612337 EP400NLQ6ZTU2 488 aa20.17■□□□□ 0.82
SSBP1-215ENST00000612337 SMAP1Q8IYB5 467 aaPredicted RBP20.17■□□□□ 0.82
SSBP1-215ENST00000612337 PHKBQ93100 1093 aa20.17■□□□□ 0.82
SSBP1-215ENST00000612337 UIMC1Q96RL1 719 aa20.17■□□□□ 0.82
SSBP1-215ENST00000612337 FAM50BQ9Y247 325 aa20.17■□□□□ 0.82
SSBP1-215ENST00000612337 MAFBQ9Y5Q3 323 aaPredicted RBP20.17■□□□□ 0.82
SSBP1-215ENST00000612337 KIAA1671Q9BY89 1806 aa20.16■□□□□ 0.82
SSBP1-215ENST00000612337 GPR37L1O60883 481 aa20.16■□□□□ 0.82
SSBP1-215ENST00000612337 RPS6KA5O75582 802 aa20.16■□□□□ 0.82
SSBP1-215ENST00000612337 CIITAP33076 1130 aa20.16■□□□□ 0.82
SSBP1-215ENST00000612337 LTBRP36941 435 aa20.16■□□□□ 0.82
SSBP1-215ENST00000612337 AKAP17AQ02040 695 aaKnown RBP20.16■□□□□ 0.82
SSBP1-215ENST00000612337 NFX1Q12986 1120 aaKnown RBP20.16■□□□□ 0.82
SSBP1-215ENST00000612337 CTC1Q2NKJ3 1217 aa20.16■□□□□ 0.82
SSBP1-215ENST00000612337 BICD2Q8TD16 824 aa20.16■□□□□ 0.82
SSBP1-215ENST00000612337 BBXQ8WY36 941 aaPredicted RBP20.16■□□□□ 0.82
SSBP1-215ENST00000612337 RNF26Q9BY78 433 aaPredicted RBP20.16■□□□□ 0.82
SSBP1-215ENST00000612337 ERVK-5Q9HDB9 667 aa20.16■□□□□ 0.82
SSBP1-215ENST00000612337 ALG13Q9NP73 1137 aaKnown RBP20.16■□□□□ 0.82
SSBP1-215ENST00000612337 LRFN2Q9ULH4 789 aa20.16■□□□□ 0.82
SSBP1-215ENST00000612337 PLAGL2Q9UPG8 496 aa20.16■□□□□ 0.82
SSBP1-215ENST00000612337 GINS2Q9Y248 185 aa20.16■□□□□ 0.82
SSBP1-215ENST00000612337 NOC2LQ9Y3T9 749 aaKnown RBP20.16■□□□□ 0.82
SSBP1-215ENST00000612337 PSAPP07602 524 aa20.15■□□□□ 0.82
SSBP1-215ENST00000612337 PSMA5P28066 241 aa20.15■□□□□ 0.82
SSBP1-215ENST00000612337 SSTR3P32745 418 aaPredicted RBP20.15■□□□□ 0.82
SSBP1-215ENST00000612337 SARSP49591 514 aaKnown RBP20.15■□□□□ 0.82
SSBP1-215ENST00000612337 HYAL1Q12794 435 aa20.15■□□□□ 0.82
SSBP1-215ENST00000612337 PAN2Q504Q3 1202 aaKnown RBP20.15■□□□□ 0.82
SSBP1-215ENST00000612337 PRR16Q569H4 304 aa20.15■□□□□ 0.82
SSBP1-215ENST00000612337 ODR4Q5SWX8 454 aa20.15■□□□□ 0.82
SSBP1-215ENST00000612337 CKAP2LQ8IYA6 745 aa20.15■□□□□ 0.82
SSBP1-215ENST00000612337 CCDC148Q8NFR7 591 aa20.15■□□□□ 0.82
SSBP1-215ENST00000612337 CDHR5Q9HBB8 845 aa20.15■□□□□ 0.82
SSBP1-215ENST00000612337 C11orf16Q9NQ32 467 aa20.15■□□□□ 0.82
SSBP1-215ENST00000612337 TCEAL9Q9UHQ7 104 aa20.15■□□□□ 0.82
SSBP1-215ENST00000612337 PCDHA10Q9Y5I2 948 aa20.15■□□□□ 0.82
SSBP1-215ENST00000612337 REC8O95072 547 aa20.14■□□□□ 0.81
SSBP1-215ENST00000612337 C22orf31O95567 290 aa20.14■□□□□ 0.81
SSBP1-215ENST00000612337 IFNAR1P17181 557 aa20.14■□□□□ 0.81
SSBP1-215ENST00000612337 EVCP57679 992 aa20.14■□□□□ 0.81
SSBP1-215ENST00000612337 CAMK1Q14012 370 aa20.14■□□□□ 0.81
SSBP1-215ENST00000612337 RASGRP4Q8TDF6 673 aa20.14■□□□□ 0.81
SSBP1-215ENST00000612337 TMEM40Q8WWA1 233 aa20.14■□□□□ 0.81
SSBP1-215ENST00000612337 LENG9Q96B70 501 aa20.14■□□□□ 0.81
SSBP1-215ENST00000612337 SLC26A6Q9BXS9 759 aa20.14■□□□□ 0.81
SSBP1-215ENST00000612337 RGS18Q9NS28 235 aa20.14■□□□□ 0.81
SSBP1-215ENST00000612337 RNF216Q9NWF9 866 aaPredicted RBP20.14■□□□□ 0.81
SSBP1-215ENST00000612337 PRKAG3Q9UGI9 489 aa20.14■□□□□ 0.81
SSBP1-215ENST00000612337 CEP131Q9UPN4 1083 aa20.14■□□□□ 0.81
SSBP1-215ENST00000612337 PCDHB7Q9Y5E2 793 aa20.14■□□□□ 0.81
SSBP1-215ENST00000612337 GPR182O15218 404 aa20.13■□□□□ 0.81
SSBP1-215ENST00000612337 MGEA5O60502 916 aa20.13■□□□□ 0.81
SSBP1-215ENST00000612337 ITGB1P05556 798 aa20.13■□□□□ 0.81
SSBP1-215ENST00000612337 GATMP50440 423 aa20.13■□□□□ 0.81
SSBP1-215ENST00000612337 CRYBB1P53674 252 aaPredicted RBP20.13■□□□□ 0.81
SSBP1-215ENST00000612337 SPPL3Q8TCT6 385 aa20.13■□□□□ 0.81
SSBP1-215ENST00000612337 C1orf112Q9NSG2 853 aa20.13■□□□□ 0.81
SSBP1-215ENST00000612337 GABBR1Q9UBS5 961 aa20.13■□□□□ 0.81
SSBP1-215ENST00000612337 ST3GAL5Q9UNP4 418 aa20.13■□□□□ 0.81
SSBP1-215ENST00000612337 TRIOO75962 3097 aa20.12■□□□□ 0.81
SSBP1-215ENST00000612337 WDR81Q562E7 1941 aa20.12■□□□□ 0.81
SSBP1-215ENST00000612337 DENND3A2RUS2 1198 aa20.12■□□□□ 0.81
SSBP1-215ENST00000612337 PPFIA3O75145 1194 aa20.12■□□□□ 0.81
SSBP1-215ENST00000612337 DNAJB1P25685 340 aa20.12■□□□□ 0.81
SSBP1-215ENST00000612337 PDIA3P30101 505 aaKnown RBP20.12■□□□□ 0.81
SSBP1-215ENST00000612337 ZP2Q05996 745 aa20.12■□□□□ 0.81
SSBP1-215ENST00000612337 KIZQ2M2Z5 673 aa20.12■□□□□ 0.81
SSBP1-215ENST00000612337 SLC24A5Q71RS6 500 aa20.12■□□□□ 0.81
SSBP1-215ENST00000612337 METTL13Q8N6R0 699 aa20.12■□□□□ 0.81
SSBP1-215ENST00000612337 KLHL23Q8NBE8 558 aa20.12■□□□□ 0.81
SSBP1-215ENST00000612337 PPP2R3CQ969Q6 453 aa20.12■□□□□ 0.81
SSBP1-215ENST00000612337 FAM167AQ96KS9 214 aa20.12■□□□□ 0.81
SSBP1-215ENST00000612337 ADAM2Q99965 735 aa20.12■□□□□ 0.81
SSBP1-215ENST00000612337 SH3GLB2Q9NR46 395 aa20.12■□□□□ 0.81
SSBP1-215ENST00000612337 VPS54Q9P1Q0 977 aa20.12■□□□□ 0.81
SSBP1-215ENST00000612337 SAMM50Q9Y512 469 aa20.12■□□□□ 0.81
SSBP1-215ENST00000612337 FAM86C2PA6NEL3 165 aa20.11■□□□□ 0.81
SSBP1-215ENST00000612337 WDR64B1ANS9 1081 aa20.11■□□□□ 0.81
SSBP1-215ENST00000612337 C9IYK1 514 aa20.11■□□□□ 0.81
SSBP1-215ENST00000612337 MAGEB2O15479 319 aa20.11■□□□□ 0.81
SSBP1-215ENST00000612337 EDIL3O43854 480 aa20.11■□□□□ 0.81
SSBP1-215ENST00000612337 GPR32O75388 356 aa20.11■□□□□ 0.81
SSBP1-215ENST00000612337 CSPG5O95196 566 aa20.11■□□□□ 0.81
SSBP1-215ENST00000612337 GTF2F1P35269 517 aaKnown RBP eCLIP20.11■□□□□ 0.81
SSBP1-215ENST00000612337 PLA2G5P39877 138 aa20.11■□□□□ 0.81
SSBP1-215ENST00000612337 USP11P51784 963 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms