RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 TRIM32Q13049 653 aa20.65■□□□□ 0.9
SSBP4-212ENST00000601919 C1orf186Q6ZWK4 172 aa20.65■□□□□ 0.9
SSBP4-212ENST00000601919 DYMQ7RTS9 669 aa20.65■□□□□ 0.9
SSBP4-212ENST00000601919 EXOC8Q8IYI6 725 aa20.65■□□□□ 0.9
SSBP4-212ENST00000601919 ATP8B4Q8TF62 1192 aa20.65■□□□□ 0.9
SSBP4-212ENST00000601919 CYP26B1Q9NR63 512 aa20.65■□□□□ 0.9
SSBP4-212ENST00000601919 MAN1B1Q9UKM7 699 aa20.65■□□□□ 0.9
SSBP4-212ENST00000601919 PTPN22Q9Y2R2 807 aa20.65■□□□□ 0.9
SSBP4-212ENST00000601919 PTCH2Q9Y6C5 1203 aa20.65■□□□□ 0.9
SSBP4-212ENST00000601919 BIN1O00499 593 aa20.64■□□□□ 0.89
SSBP4-212ENST00000601919 HBP1O60381 514 aa20.64■□□□□ 0.89
SSBP4-212ENST00000601919 TBCAO75347 108 aaKnown RBP20.64■□□□□ 0.89
SSBP4-212ENST00000601919 DGAT1O75907 488 aa20.64■□□□□ 0.89
SSBP4-212ENST00000601919 INHAP05111 366 aa20.64■□□□□ 0.89
SSBP4-212ENST00000601919 IDEP14735 1019 aa20.64■□□□□ 0.89
SSBP4-212ENST00000601919 GUCY2CP25092 1073 aa20.64■□□□□ 0.89
SSBP4-212ENST00000601919 GJA9P57773 515 aa20.64■□□□□ 0.89
SSBP4-212ENST00000601919 FSCN1Q16658 493 aaKnown RBP20.64■□□□□ 0.89
SSBP4-212ENST00000601919 ARSHQ5FYA8 562 aa20.64■□□□□ 0.89
SSBP4-212ENST00000601919 PLA2G4FQ68DD2 849 aa20.64■□□□□ 0.89
SSBP4-212ENST00000601919 TRMT1LQ7Z2T5 733 aaKnown RBP20.64■□□□□ 0.89
SSBP4-212ENST00000601919 FUCA2Q9BTY2 467 aa20.64■□□□□ 0.89
SSBP4-212ENST00000601919 RUSC1Q9BVN2 902 aa20.64■□□□□ 0.89
SSBP4-212ENST00000601919 NAT10Q9H0A0 1025 aaKnown RBP20.64■□□□□ 0.89
SSBP4-212ENST00000601919 UPF3AQ9H1J1 476 aaKnown RBP20.64■□□□□ 0.89
SSBP4-212ENST00000601919 HMX1Q9NP08 348 aaPredicted RBP20.64■□□□□ 0.89
SSBP4-212ENST00000601919 DACH1Q9UI36 760 aa20.64■□□□□ 0.89
SSBP4-212ENST00000601919 ODF2LQ9ULJ1 636 aa20.64■□□□□ 0.89
SSBP4-212ENST00000601919 MYH11P35749 1972 aa20.63■□□□□ 0.89
SSBP4-212ENST00000601919 H3BRB1 525 aa20.63■□□□□ 0.89
SSBP4-212ENST00000601919 RHOBTB3O94955 611 aa20.63■□□□□ 0.89
SSBP4-212ENST00000601919 ATP4AP20648 1035 aa20.63■□□□□ 0.89
SSBP4-212ENST00000601919 PTGS1P23219 599 aa20.63■□□□□ 0.89
SSBP4-212ENST00000601919 CCND3P30281 292 aaPredicted RBP20.63■□□□□ 0.89
SSBP4-212ENST00000601919 PSMD2Q13200 908 aa20.63■□□□□ 0.89
SSBP4-212ENST00000601919 MORC3Q14149 939 aa20.63■□□□□ 0.89
SSBP4-212ENST00000601919 GIT2Q14161 759 aa20.63■□□□□ 0.89
SSBP4-212ENST00000601919 KMT5BQ4FZB7 885 aa20.63■□□□□ 0.89
SSBP4-212ENST00000601919 TRIM50Q86XT4 487 aa20.63■□□□□ 0.89
SSBP4-212ENST00000601919 MCPH1Q8NEM0 835 aa20.63■□□□□ 0.89
SSBP4-212ENST00000601919 DNAJC19Q96DA6 116 aa20.63■□□□□ 0.89
SSBP4-212ENST00000601919 TUT1Q9H6E5 874 aaKnown RBP20.63■□□□□ 0.89
SSBP4-212ENST00000601919 PANK4Q9NVE7 773 aa20.63■□□□□ 0.89
SSBP4-212ENST00000601919 TRPC6Q9Y210 931 aa20.63■□□□□ 0.89
SSBP4-212ENST00000601919 COL4A3BPQ9Y5P4 624 aa20.63■□□□□ 0.89
SSBP4-212ENST00000601919 KLRC4O43908 158 aa20.62■□□□□ 0.89
SSBP4-212ENST00000601919 FAM13AO94988 1023 aa20.62■□□□□ 0.89
SSBP4-212ENST00000601919 C6orf222P0C671 652 aaPredicted RBP20.62■□□□□ 0.89
SSBP4-212ENST00000601919 GAP43P17677 238 aa20.62■□□□□ 0.89
SSBP4-212ENST00000601919 MARK3P27448 753 aa20.62■□□□□ 0.89
SSBP4-212ENST00000601919 RFC5P40937 340 aa20.62■□□□□ 0.89
SSBP4-212ENST00000601919 CTCFP49711 727 aaPredicted RBP20.62■□□□□ 0.89
SSBP4-212ENST00000601919 NPEPPSP55786 919 aa20.62■□□□□ 0.89
SSBP4-212ENST00000601919 NKX3-2P78367 333 aa20.62■□□□□ 0.89
SSBP4-212ENST00000601919 PLCB4Q15147 1175 aa20.62■□□□□ 0.89
SSBP4-212ENST00000601919 MTERF2Q49AM1 385 aa20.62■□□□□ 0.89
SSBP4-212ENST00000601919 MLKLQ8NB16 471 aa20.62■□□□□ 0.89
SSBP4-212ENST00000601919 LENG1Q96BZ8 264 aaPredicted RBP20.62■□□□□ 0.89
SSBP4-212ENST00000601919 DRC1Q96MC2 740 aa20.62■□□□□ 0.89
SSBP4-212ENST00000601919 JPH2Q9BR39 696 aaPredicted RBP20.62■□□□□ 0.89
SSBP4-212ENST00000601919 REEP2Q9BRK0 252 aa20.62■□□□□ 0.89
SSBP4-212ENST00000601919 C16orf70Q9BSU1 422 aa20.62■□□□□ 0.89
SSBP4-212ENST00000601919 KATNAL1Q9BW62 490 aa20.62■□□□□ 0.89
SSBP4-212ENST00000601919 XPNPEP3Q9NQH7 507 aa20.62■□□□□ 0.89
SSBP4-212ENST00000601919 DDX20Q9UHI6 824 aaKnown RBP20.62■□□□□ 0.89
SSBP4-212ENST00000601919 SYNRGQ9UMZ2 1314 aa20.61■□□□□ 0.89
SSBP4-212ENST00000601919 FRMD3A2A2Y4 597 aa20.61■□□□□ 0.89
SSBP4-212ENST00000601919 USO1O60763 962 aaKnown RBP20.61■□□□□ 0.89
SSBP4-212ENST00000601919 ZNF286BP0CG31 522 aa20.61■□□□□ 0.89
SSBP4-212ENST00000601919 HSPA8P11142 646 aaKnown RBP20.61■□□□□ 0.89
SSBP4-212ENST00000601919 PPP1R2P41236 205 aa20.61■□□□□ 0.89
SSBP4-212ENST00000601919 POLGP54098 1239 aaPredicted RBP20.61■□□□□ 0.89
SSBP4-212ENST00000601919 CT47A1Q5JQC4 288 aaPredicted RBP20.61■□□□□ 0.89
SSBP4-212ENST00000601919 ZNF484Q5JVG2 852 aa20.61■□□□□ 0.89
SSBP4-212ENST00000601919 ZNF658Q5TYW1 1059 aaPredicted RBP20.61■□□□□ 0.89
SSBP4-212ENST00000601919 CTU1Q7Z7A3 348 aaKnown RBP20.61■□□□□ 0.89
SSBP4-212ENST00000601919 SLC7A3Q8WY07 619 aa20.61■□□□□ 0.89
SSBP4-212ENST00000601919 ZHX3Q9H4I2 956 aa20.61■□□□□ 0.89
SSBP4-212ENST00000601919 ATP6V0A4Q9HBG4 840 aa20.61■□□□□ 0.89
SSBP4-212ENST00000601919 SEL1LQ9UBV2 794 aa20.61■□□□□ 0.89
SSBP4-212ENST00000601919 KAT6AQ92794 2004 aa20.61■□□□□ 0.89
SSBP4-212ENST00000601919 COL1A2P08123 1366 aa20.6■□□□□ 0.89
SSBP4-212ENST00000601919 NPHP3-ACAD11A0A0J9YXS1 232 aa20.6■□□□□ 0.89
SSBP4-212ENST00000601919 TMEM150BA6NC51 233 aa20.6■□□□□ 0.89
SSBP4-212ENST00000601919 MYL3P08590 195 aa20.6■□□□□ 0.89
SSBP4-212ENST00000601919 RAD51AP2Q09MP3 1159 aa20.6■□□□□ 0.89
SSBP4-212ENST00000601919 COASYQ13057 564 aa20.6■□□□□ 0.89
SSBP4-212ENST00000601919 STIM1Q13586 685 aa20.6■□□□□ 0.89
SSBP4-212ENST00000601919 SLC9C1Q4G0N8 1177 aa20.6■□□□□ 0.89
SSBP4-212ENST00000601919 HERC4Q5GLZ8 1057 aaPredicted RBP20.6■□□□□ 0.89
SSBP4-212ENST00000601919 GNASQ5JWF2 1037 aa20.6■□□□□ 0.89
SSBP4-212ENST00000601919 ISM2Q6H9L7 571 aa20.6■□□□□ 0.89
SSBP4-212ENST00000601919 PARVGQ9HBI0 331 aa20.6■□□□□ 0.89
SSBP4-212ENST00000601919 KCNG1Q9UIX4 513 aa20.6■□□□□ 0.89
SSBP4-212ENST00000601919 GAS2O43903 313 aaKnown RBP20.59■□□□□ 0.89
SSBP4-212ENST00000601919 F2P00734 622 aa20.59■□□□□ 0.89
SSBP4-212ENST00000601919 TBC1D8BQ0IIM8 1120 aa20.59■□□□□ 0.89
SSBP4-212ENST00000601919 TARBP2Q15633 366 aaKnown RBP20.59■□□□□ 0.89
SSBP4-212ENST00000601919 PKN2Q16513 984 aaKnown RBP20.59■□□□□ 0.89
SSBP4-212ENST00000601919 ANO6Q4KMQ2 910 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms