RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 SLC24A5Q71RS6 500 aa6.79□□□□□ -1.32
SMG6-219ENST00000575663 RTN4RL1Q86UN2 441 aaPredicted RBP6.79□□□□□ -1.32
SMG6-219ENST00000575663 CABP7Q86V35 215 aa6.79□□□□□ -1.32
SMG6-219ENST00000575663 CDHR1Q96JP9 859 aa6.79□□□□□ -1.32
SMG6-219ENST00000575663 RTKNQ9BST9 563 aa6.79□□□□□ -1.32
SMG6-219ENST00000575663 CELF4Q9BZC1 486 aaKnown RBP6.79□□□□□ -1.32
SMG6-219ENST00000575663 SMARCAD1Q9H4L7 1026 aa6.79□□□□□ -1.32
SMG6-219ENST00000575663 AZI2Q9H6S1 392 aa6.79□□□□□ -1.32
SMG6-219ENST00000575663 SFXN1Q9H9B4 322 aa6.79□□□□□ -1.32
SMG6-219ENST00000575663 HELLSQ9NRZ9 838 aa6.79□□□□□ -1.32
SMG6-219ENST00000575663 RGS18Q9NS28 235 aa6.79□□□□□ -1.32
SMG6-219ENST00000575663 WNT16Q9UBV4 365 aa6.79□□□□□ -1.32
SMG6-219ENST00000575663 NEDD4P46934 1319 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 FRMPD4Q14CM0 1322 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.78□□□□□ -1.32
SMG6-219ENST00000575663 C2orf71A6NGG8 1288 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 GPR182O15218 404 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 CLASP2O75122 1294 aaKnown RBP6.78□□□□□ -1.32
SMG6-219ENST00000575663 ADRB1P08588 477 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 CFHP08603 1231 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 WEE2P0C1S8 567 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 SP9P0CG40 484 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 FGFR1P11362 822 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 ATXN1P54253 815 aaKnown RBP6.78□□□□□ -1.32
SMG6-219ENST00000575663 MRPS9P82933 396 aaKnown RBP6.78□□□□□ -1.32
SMG6-219ENST00000575663 KRT76Q01546 638 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 SEMA3FQ13275 785 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 GIT2Q14161 759 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 TMEM266Q2M3C6 531 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 SPECC1Q5M775 1068 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 VARS2Q5ST30 1063 aaKnown RBP6.78□□□□□ -1.32
SMG6-219ENST00000575663 MARCH8Q5T0T0 291 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 FAM102BQ5T8I3 360 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 KCNT2Q6UVM3 1135 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 HOMER1Q86YM7 354 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 TBC1D10CQ8IV04 446 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 C1orf210Q8IVY1 113 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 NME8Q8N427 588 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 DCLK2Q8N568 766 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 MRPL43Q8N983 215 aaKnown RBP6.78□□□□□ -1.32
SMG6-219ENST00000575663 PI4K2BQ8TCG2 481 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 SEPT1Q8WYJ6 367 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 ADAM2Q99965 735 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 TMEM117Q9H0C3 514 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 TMX1Q9H3N1 280 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 BCAS3Q9H6U6 928 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 CWH43Q9H720 699 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 ELAC1Q9H777 363 aaKnown RBP6.78□□□□□ -1.32
SMG6-219ENST00000575663 TBC1D17Q9HA65 648 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 KCNK12Q9HB15 430 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 TMEM161AQ9NX61 479 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 RTEL1Q9NZ71 1219 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 SPG21Q9NZD8 308 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 IGSF9Q9P2J2 1179 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 HCSTQ9UBK5 93 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 GINS2Q9Y248 185 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 KIAA1671Q9BY89 1806 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 NCOR2Q9Y618 2525 aa6.78□□□□□ -1.32
SMG6-219ENST00000575663 TTC3P53804 2025 aa6.77□□□□□ -1.32
SMG6-219ENST00000575663 SMIM35A0A1B0GVV1 85 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 CARNS1A5YM72 827 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 C9IYK1 514 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 KLRF2D3W0D1 207 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 ZNF213O14771 459 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 MGEA5O60502 916 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 SRFP11831 508 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 INSRRP14616 1297 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 MFAP1P55081 439 aaKnown RBP6.77□□□□□ -1.33
SMG6-219ENST00000575663 MCMDC2Q4G0Z9 681 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 IFIT1BQ5T764 474 aaKnown RBP6.77□□□□□ -1.33
SMG6-219ENST00000575663 PCNX4Q63HM2 1172 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 TMC5Q6UXY8 1006 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 PPFIBP1Q86W92 1011 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 SMARCC2Q8TAQ2 1214 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 STAMQ92783 540 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 CUL5Q93034 780 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 EVI5LQ96CN4 794 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 GPRASP2Q96D09 838 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 TMEM169Q96HH4 297 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 ZSCAN10Q96SZ4 725 aaPredicted RBP6.77□□□□□ -1.33
SMG6-219ENST00000575663 UBAC1Q9BSL1 405 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 MRPL9Q9BYD2 267 aaKnown RBP6.77□□□□□ -1.33
SMG6-219ENST00000575663 ARHGEF3Q9NR81 526 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 USP18Q9UMW8 372 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 SIT1Q9Y3P8 196 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 PCDHA2Q9Y5H9 948 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 EPG5Q9HCE0 2579 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 PLXNA4Q9HCM2 1894 aa6.77□□□□□ -1.33
SMG6-219ENST00000575663 KMT2BQ9UMN6 2715 aaPredicted RBP6.77□□□□□ -1.33
SMG6-219ENST00000575663 KRBA1A5PL33 1030 aa6.76□□□□□ -1.33
SMG6-219ENST00000575663 NARSO43776 548 aaKnown RBP6.76□□□□□ -1.33
SMG6-219ENST00000575663 PPP1R11O60927 126 aaPredicted RBP6.76□□□□□ -1.33
SMG6-219ENST00000575663 CENPBP07199 599 aaPredicted RBP6.76□□□□□ -1.33
SMG6-219ENST00000575663 DCNP07585 359 aaKnown RBP6.76□□□□□ -1.33
SMG6-219ENST00000575663 MX1P20591 662 aa6.76□□□□□ -1.33
SMG6-219ENST00000575663 GBP2P32456 591 aaPredicted RBP6.76□□□□□ -1.33
SMG6-219ENST00000575663 PBX3P40426 434 aa6.76□□□□□ -1.33
SMG6-219ENST00000575663 ALDH7A1P49419 539 aaKnown RBP6.76□□□□□ -1.33
SMG6-219ENST00000575663 MTMR1Q13613 665 aa6.76□□□□□ -1.33
SMG6-219ENST00000575663 COL9A2Q14055 689 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms