RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	ACTR5	Q9H9F9	607 aa	Predicted RBP	13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	MAGEF1	Q9HAY2	307 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	PARP14	Q460N5	1801 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820		H7C1D1	291 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	PLA2G6	O60733	806 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	TACC1	O75410	805 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	FAM107A	O95990	144 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	MYL1	P05976	194 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	EZR	P15311	586 aa	Known RBP	13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	USP11	P51784	963 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	SEC24C	P53992	1094 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	GRB10	Q13322	594 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	TMEM266	Q2M3C6	531 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	C8orf74	Q6P047	294 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	CCDC121	Q6ZUS5	278 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	CCDC43	Q96MW1	224 aa	Known RBP	13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	NAP1L4	Q99733	375 aa	Known RBP	13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	RANBP17	Q9H2T7	1088 aa	Known RBP	13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	LRWD1	Q9UFC0	647 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	KLRC4	O43908	158 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	SNUPN	O95149	360 aa	Known RBP	13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	CYP3A7	P24462	503 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	CYP27A1	Q02318	531 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	PDIA5	Q14554	519 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	EMC10	Q5UCC4	262 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	PARP9	Q8IXQ6	854 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	RMND1	Q9NWS8	449 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	ZNF233	A6NK53	670 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820		E7EVH7	732 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	PRLR	P16471	622 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	TCP1	P17987	556 aa	Known RBP	13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	TRIM21	P19474	475 aa	Known RBP	13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	MDH1	P40925	334 aa	Known RBP	13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	RPS6KA3	P51812	740 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	ARHGAP4	P98171	946 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	SLC5A9	Q2M3M2	681 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	FKBP15	Q5T1M5	1219 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	CYB5D1	Q6P9G0	228 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	MOXD1	Q6UVY6	613 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	CHURC1	Q8WUH1	139 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	GJA10	Q969M2	543 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	PNMA5	Q96PV4	448 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	ZNF341	Q9BYN7	854 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	DEFB129	Q9H1M3	183 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	KCNMB3	Q9NPA1	279 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	DDX20	Q9UHI6	824 aa	Known RBP	13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	MAPK8IP1	Q9UQF2	711 aa		13.1	□□□□□ -0.31
SPG7-222	ENST00000569820	SRRM3	A6NNA2	597 aa	Predicted RBP	13.09	□□□□□ -0.31
SPG7-222	ENST00000569820	PIK3CD	O00329	1044 aa		13.09	□□□□□ -0.31
SPG7-222	ENST00000569820	SREBF1	P36956	1147 aa		13.09	□□□□□ -0.31
SPG7-222	ENST00000569820	KCNB1	Q14721	858 aa		13.09	□□□□□ -0.31
SPG7-222	ENST00000569820	SPA17	Q15506	151 aa		13.09	□□□□□ -0.31
SPG7-222	ENST00000569820	C6orf89	Q6UWU4	347 aa		13.09	□□□□□ -0.31
SPG7-222	ENST00000569820	FAM160B2	Q86V87	743 aa		13.09	□□□□□ -0.31
SPG7-222	ENST00000569820	IRF2BP1	Q8IU81	584 aa		13.09	□□□□□ -0.31
SPG7-222	ENST00000569820	IQCK	Q8N0W5	287 aa		13.09	□□□□□ -0.31
SPG7-222	ENST00000569820	ZNF507	Q8TCN5	953 aa		13.09	□□□□□ -0.31
SPG7-222	ENST00000569820	CALML4	Q96GE6	196 aa		13.09	□□□□□ -0.31
SPG7-222	ENST00000569820	OSBPL9	Q96SU4	736 aa		13.09	□□□□□ -0.31
SPG7-222	ENST00000569820	RAB34	Q9BZG1	259 aa		13.09	□□□□□ -0.31
SPG7-222	ENST00000569820	BLOC1S4	Q9NUP1	217 aa		13.09	□□□□□ -0.31
SPG7-222	ENST00000569820	FBXO28	Q9NVF7	368 aa		13.09	□□□□□ -0.31
SPG7-222	ENST00000569820	HYOU1	Q9Y4L1	999 aa		13.09	□□□□□ -0.31
SPG7-222	ENST00000569820	CAPN6	Q9Y6Q1	641 aa		13.09	□□□□□ -0.31
SPG7-222	ENST00000569820	PHIP	Q8WWQ0	1821 aa		13.09	□□□□□ -0.31
SPG7-222	ENST00000569820	USO1	O60763	962 aa	Known RBP	13.08	□□□□□ -0.31
SPG7-222	ENST00000569820	FOS	P01100	380 aa	Predicted RBP	13.08	□□□□□ -0.31
SPG7-222	ENST00000569820	EEF1G	P26641	437 aa	Known RBP	13.08	□□□□□ -0.31
SPG7-222	ENST00000569820	HOXA13	P31271	388 aa	Predicted RBP	13.08	□□□□□ -0.31
SPG7-222	ENST00000569820	PAFAH1B1	P43034	410 aa		13.08	□□□□□ -0.31
SPG7-222	ENST00000569820	CLNS1A	P54105	237 aa	Known RBP	13.08	□□□□□ -0.31
SPG7-222	ENST00000569820	IFT20	Q8IY31	132 aa		13.08	□□□□□ -0.31
SPG7-222	ENST00000569820	MAGEC3	Q8TD91	643 aa		13.08	□□□□□ -0.31
SPG7-222	ENST00000569820	MICAL1	Q8TDZ2	1067 aa		13.08	□□□□□ -0.31
SPG7-222	ENST00000569820	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.08	□□□□□ -0.31
SPG7-222	ENST00000569820	SCLT1	Q96NL6	688 aa		13.08	□□□□□ -0.31
SPG7-222	ENST00000569820	NUDT12	Q9BQG2	462 aa		13.08	□□□□□ -0.31
SPG7-222	ENST00000569820	TRIM9	Q9C026	710 aa		13.08	□□□□□ -0.31
SPG7-222	ENST00000569820	AGPAT5	Q9NUQ2	364 aa		13.08	□□□□□ -0.31
SPG7-222	ENST00000569820	FEM1B	Q9UK73	627 aa		13.08	□□□□□ -0.31
SPG7-222	ENST00000569820	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.08	□□□□□ -0.31
SPG7-222	ENST00000569820	GDA	Q9Y2T3	454 aa		13.08	□□□□□ -0.31
SPG7-222	ENST00000569820	SPDYE3	A6NKU9	549 aa		13.08	□□□□□ -0.32
SPG7-222	ENST00000569820	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.08	□□□□□ -0.32
SPG7-222	ENST00000569820	MAFG	O15525	162 aa		13.08	□□□□□ -0.32
SPG7-222	ENST00000569820	RHOBTB3	O94955	611 aa		13.08	□□□□□ -0.32
SPG7-222	ENST00000569820	SSB	P05455	408 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
SPG7-222	ENST00000569820	PRCP	P42785	496 aa		13.08	□□□□□ -0.32
SPG7-222	ENST00000569820	DNM2	P50570	870 aa		13.08	□□□□□ -0.32
SPG7-222	ENST00000569820	TMEM119	Q4V9L6	283 aa		13.08	□□□□□ -0.32
SPG7-222	ENST00000569820	GLE1	Q53GS7	698 aa	Known RBP	13.08	□□□□□ -0.32
SPG7-222	ENST00000569820	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.08	□□□□□ -0.32
SPG7-222	ENST00000569820	NFRKB	Q6P4R8	1299 aa		13.08	□□□□□ -0.32
SPG7-222	ENST00000569820	CCDC174	Q6PII3	467 aa		13.08	□□□□□ -0.32
SPG7-222	ENST00000569820	FUK	Q8N0W3	1084 aa		13.08	□□□□□ -0.32
SPG7-222	ENST00000569820	TRPM4	Q8TD43	1214 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms