RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 C1orf112Q9NSG2 853 aa23.76■■□□□ 1.39
HERC2-204ENST00000563945 KLF18A0A0U1RQI7 1052 aa23.75■■□□□ 1.39
HERC2-204ENST00000563945 TBX10O75333 385 aa23.75■■□□□ 1.39
HERC2-204ENST00000563945 NRIP1P48552 1158 aa23.75■■□□□ 1.39
HERC2-204ENST00000563945 CAMK1Q14012 370 aa23.75■■□□□ 1.39
HERC2-204ENST00000563945 KRT32Q14532 448 aa23.75■■□□□ 1.39
HERC2-204ENST00000563945 JAKMIP3Q5VZ66 844 aa23.75■■□□□ 1.39
HERC2-204ENST00000563945 SWSAP1Q6NVH7 229 aa23.75■■□□□ 1.39
HERC2-204ENST00000563945 ABHD15Q6UXT9 468 aa23.75■■□□□ 1.39
HERC2-204ENST00000563945 CRIPAKQ8N1N5 446 aa23.75■■□□□ 1.39
HERC2-204ENST00000563945 EFHBQ8N7U6 833 aa23.75■■□□□ 1.39
HERC2-204ENST00000563945 MFSD14AQ96MC6 490 aa23.75■■□□□ 1.39
HERC2-204ENST00000563945 TCEANC2Q96MN5 208 aa23.75■■□□□ 1.39
HERC2-204ENST00000563945 BRPF3Q9ULD4 1205 aa23.75■■□□□ 1.39
HERC2-204ENST00000563945 COL1A2P08123 1366 aa23.75■■□□□ 1.39
HERC2-204ENST00000563945 IGKV6D-21A0A0A0MT36 114 aa23.74■■□□□ 1.39
HERC2-204ENST00000563945 TBKBP1A7MCY6 615 aa23.74■■□□□ 1.39
HERC2-204ENST00000563945 DNAJB1P25685 340 aa23.74■■□□□ 1.39
HERC2-204ENST00000563945 EXOSC10Q01780 885 aaKnown RBP23.74■■□□□ 1.39
HERC2-204ENST00000563945 MCTP2Q6DN12 878 aa23.74■■□□□ 1.39
HERC2-204ENST00000563945 RNF135Q8IUD6 432 aa23.74■■□□□ 1.39
HERC2-204ENST00000563945 ADAM2Q99965 735 aa23.74■■□□□ 1.39
HERC2-204ENST00000563945 KCNH6Q9H252 994 aa23.74■■□□□ 1.39
HERC2-204ENST00000563945 TMX1Q9H3N1 280 aa23.74■■□□□ 1.39
HERC2-204ENST00000563945 TLE6Q9H808 572 aa23.74■■□□□ 1.39
HERC2-204ENST00000563945 ERVK-5Q9HDB9 667 aa23.74■■□□□ 1.39
HERC2-204ENST00000563945 NOC2LQ9Y3T9 749 aaKnown RBP23.74■■□□□ 1.39
HERC2-204ENST00000563945 CCDC196A0A1B0GTZ2 297 aa23.73■■□□□ 1.39
HERC2-204ENST00000563945 CCNE2O96020 404 aa23.73■■□□□ 1.39
HERC2-204ENST00000563945 GATMP50440 423 aa23.73■■□□□ 1.39
HERC2-204ENST00000563945 UBE3AQ05086 875 aa23.73■■□□□ 1.39
HERC2-204ENST00000563945 SLC24A5Q71RS6 500 aa23.73■■□□□ 1.39
HERC2-204ENST00000563945 ALYREFQ86V81 257 aaKnown RBP23.73■■□□□ 1.39
HERC2-204ENST00000563945 KIAA0319LQ8IZA0 1049 aa23.73■■□□□ 1.39
HERC2-204ENST00000563945 ZNF577Q9BSK1 485 aa23.73■■□□□ 1.39
HERC2-204ENST00000563945 TBC1D22BQ9NU19 505 aa23.73■■□□□ 1.39
HERC2-204ENST00000563945 MUTYHQ9UIF7 546 aa23.73■■□□□ 1.39
HERC2-204ENST00000563945 ST3GAL5Q9UNP4 418 aa23.73■■□□□ 1.39
HERC2-204ENST00000563945 IPO5O00410 1097 aaKnown RBP23.72■■□□□ 1.39
HERC2-204ENST00000563945 HMGB1P09429 215 aaKnown RBP23.72■■□□□ 1.39
HERC2-204ENST00000563945 HERC4Q5GLZ8 1057 aaPredicted RBP23.72■■□□□ 1.39
HERC2-204ENST00000563945 TRMT1LQ7Z2T5 733 aaKnown RBP23.72■■□□□ 1.39
HERC2-204ENST00000563945 ADGRD2Q7Z7M1 963 aa23.72■■□□□ 1.39
HERC2-204ENST00000563945 CCDC60Q8IWA6 550 aaPredicted RBP23.72■■□□□ 1.39
HERC2-204ENST00000563945 THNSL1Q8IYQ7 743 aa23.72■■□□□ 1.39
HERC2-204ENST00000563945 METTL13Q8N6R0 699 aa23.72■■□□□ 1.39
HERC2-204ENST00000563945 CCDC12Q8WUD4 166 aaPredicted RBP23.72■■□□□ 1.39
HERC2-204ENST00000563945 CDHR5Q9HBB8 845 aa23.72■■□□□ 1.39
HERC2-204ENST00000563945 ATP6V0A4Q9HBG4 840 aa23.72■■□□□ 1.39
HERC2-204ENST00000563945 C6orf50Q9HD87 102 aa23.72■■□□□ 1.39
HERC2-204ENST00000563945 RGS18Q9NS28 235 aa23.72■■□□□ 1.39
HERC2-204ENST00000563945 PIEZO1Q92508 2521 aa23.72■■□□□ 1.39
HERC2-204ENST00000563945 FSD2A1L4K1 749 aa23.71■■□□□ 1.39
HERC2-204ENST00000563945 EYA4O95677 639 aa23.71■■□□□ 1.39
HERC2-204ENST00000563945 CLK2P49760 499 aaKnown RBP23.71■■□□□ 1.39
HERC2-204ENST00000563945 CRYBB1P53674 252 aaPredicted RBP23.71■■□□□ 1.39
HERC2-204ENST00000563945 FUT2Q10981 343 aa23.71■■□□□ 1.39
HERC2-204ENST00000563945 BBXQ8WY36 941 aaPredicted RBP23.71■■□□□ 1.39
HERC2-204ENST00000563945 MSLNLQ96KJ4 702 aa23.71■■□□□ 1.39
HERC2-204ENST00000563945 TLR9Q9NR96 1032 aa23.71■■□□□ 1.39
HERC2-204ENST00000563945 LOXHD1Q8IVV2 1947 aa23.71■■□□□ 1.39
HERC2-204ENST00000563945 FAM86B1E9PN63 330 aa23.7■■□□□ 1.38
HERC2-204ENST00000563945 PSAPP07602 524 aa23.7■■□□□ 1.38
HERC2-204ENST00000563945 FAM86B2P0C5J1 330 aa23.7■■□□□ 1.38
HERC2-204ENST00000563945 METAP2P50579 478 aaKnown RBP eCLIP23.7■■□□□ 1.38
HERC2-204ENST00000563945 RCAN1P53805 252 aa23.7■■□□□ 1.38
HERC2-204ENST00000563945 SETQ01105 290 aaPredicted RBP23.7■■□□□ 1.38
HERC2-204ENST00000563945 KIZQ2M2Z5 673 aa23.7■■□□□ 1.38
HERC2-204ENST00000563945 BMP2KLQ5H9B9 411 aa23.7■■□□□ 1.38
HERC2-204ENST00000563945 PPP1R16BQ96T49 567 aa23.7■■□□□ 1.38
HERC2-204ENST00000563945 PUF60Q9UHX1 559 aaKnown RBP23.7■■□□□ 1.38
HERC2-204ENST00000563945 CEP131Q9UPN4 1083 aa23.7■■□□□ 1.38
HERC2-204ENST00000563945 SAMM50Q9Y512 469 aa23.7■■□□□ 1.38
HERC2-204ENST00000563945 MGEA5O60502 916 aa23.69■■□□□ 1.38
HERC2-204ENST00000563945 CYP3A4P08684 503 aa23.69■■□□□ 1.38
HERC2-204ENST00000563945 SRGAP2BP0DMP2 458 aa23.69■■□□□ 1.38
HERC2-204ENST00000563945 AKAP17AQ02040 695 aaKnown RBP23.69■■□□□ 1.38
HERC2-204ENST00000563945 COASYQ13057 564 aa23.69■■□□□ 1.38
HERC2-204ENST00000563945 PFKFB3Q16875 520 aaPredicted RBP23.69■■□□□ 1.38
HERC2-204ENST00000563945 TSGA10IPQ3SY00 556 aa23.69■■□□□ 1.38
HERC2-204ENST00000563945 FAM102BQ5T8I3 360 aa23.69■■□□□ 1.38
HERC2-204ENST00000563945 PDE12Q6L8Q7 609 aaKnown RBP23.69■■□□□ 1.38
HERC2-204ENST00000563945 ZNF746Q6NUN9 644 aaPredicted RBP23.69■■□□□ 1.38
HERC2-204ENST00000563945 HFE2Q6ZVN8 426 aa23.69■■□□□ 1.38
HERC2-204ENST00000563945 EDAQ92838 391 aa23.69■■□□□ 1.38
HERC2-204ENST00000563945 CDCA3Q99618 268 aaPredicted RBP23.69■■□□□ 1.38
HERC2-204ENST00000563945 OSMRQ99650 979 aa23.69■■□□□ 1.38
HERC2-204ENST00000563945 CLEC1BQ9P126 229 aa23.69■■□□□ 1.38
HERC2-204ENST00000563945 C9IYK1 514 aa23.68■■□□□ 1.38
HERC2-204ENST00000563945 MAGEB2O15479 319 aa23.68■■□□□ 1.38
HERC2-204ENST00000563945 DHX15O43143 795 aaKnown RBP23.68■■□□□ 1.38
HERC2-204ENST00000563945 FGF18O76093 207 aa23.68■■□□□ 1.38
HERC2-204ENST00000563945 TMOD1P28289 359 aa23.68■■□□□ 1.38
HERC2-204ENST00000563945 GNA11P29992 359 aa23.68■■□□□ 1.38
HERC2-204ENST00000563945 CDC27P30260 824 aa23.68■■□□□ 1.38
HERC2-204ENST00000563945 ADD1P35611 737 aaKnown RBP23.68■■□□□ 1.38
HERC2-204ENST00000563945 SMAP1Q8IYB5 467 aaPredicted RBP23.68■■□□□ 1.38
HERC2-204ENST00000563945 REXO1Q8N1G1 1221 aaKnown RBP23.68■■□□□ 1.38
HERC2-204ENST00000563945 SMRP1Q8NCR6 262 aa23.68■■□□□ 1.38
HERC2-204ENST00000563945 TMEM40Q8WWA1 233 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms