RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 KRT222Q8N1A0 295 aa21.43■■□□□ 1.02
CDH5-204ENST00000563425 AGO4Q9HCK5 861 aaKnown RBP21.43■■□□□ 1.02
CDH5-204ENST00000563425 JADE2Q9NQC1 790 aa21.43■■□□□ 1.02
CDH5-204ENST00000563425 AIPL1Q9NZN9 384 aa21.43■■□□□ 1.02
CDH5-204ENST00000563425 GJA3Q9Y6H8 435 aa21.43■■□□□ 1.02
CDH5-204ENST00000563425 KIAA1217Q5T5P2 1943 aa21.42■■□□□ 1.02
CDH5-204ENST00000563425 DDX39AO00148 427 aaKnown RBP21.42■■□□□ 1.02
CDH5-204ENST00000563425 CLIC2O15247 247 aa21.42■■□□□ 1.02
CDH5-204ENST00000563425 PNMA6AP0CW24 399 aaPredicted RBP21.42■■□□□ 1.02
CDH5-204ENST00000563425 RASSF7Q02833 373 aa21.42■■□□□ 1.02
CDH5-204ENST00000563425 ZC2HC1CQ53FD0 456 aaPredicted RBP21.42■■□□□ 1.02
CDH5-204ENST00000563425 TDRD12Q587J7 1177 aaKnown RBP21.42■■□□□ 1.02
CDH5-204ENST00000563425 DCAF15Q66K64 600 aa21.42■■□□□ 1.02
CDH5-204ENST00000563425 GPIHBP1Q8IV16 184 aa21.42■■□□□ 1.02
CDH5-204ENST00000563425 TRIM58Q8NG06 486 aa21.42■■□□□ 1.02
CDH5-204ENST00000563425 HOMER2Q9NSB8 354 aa21.42■■□□□ 1.02
CDH5-204ENST00000563425 ARHGEF35A5YM69 484 aa21.41■■□□□ 1.02
CDH5-204ENST00000563425 ZBED4O75132 1171 aa21.41■■□□□ 1.02
CDH5-204ENST00000563425 P4HBP07237 508 aaKnown RBP21.41■■□□□ 1.02
CDH5-204ENST00000563425 FDX1P10109 184 aa21.41■■□□□ 1.02
CDH5-204ENST00000563425 GFPT1Q06210 699 aaPredicted RBP21.41■■□□□ 1.02
CDH5-204ENST00000563425 ITGB3BPQ13352 177 aaPredicted RBP21.41■■□□□ 1.02
CDH5-204ENST00000563425 STXBP4Q6ZWJ1 553 aa21.41■■□□□ 1.02
CDH5-204ENST00000563425 FAM178BQ8IXR5 827 aa21.41■■□□□ 1.02
CDH5-204ENST00000563425 TXLNBQ8N3L3 684 aa21.41■■□□□ 1.02
CDH5-204ENST00000563425 SLC35C1Q96A29 364 aa21.41■■□□□ 1.02
CDH5-204ENST00000563425 BORCS6Q96GS4 357 aa21.41■■□□□ 1.02
CDH5-204ENST00000563425 PKD2L1Q9P0L9 805 aa21.41■■□□□ 1.02
CDH5-204ENST00000563425 ZNF112Q9UJU3 913 aa21.41■■□□□ 1.02
CDH5-204ENST00000563425 CCDC151A5D8V7 595 aa21.41■■□□□ 1.02
CDH5-204ENST00000563425 ATP8B1O43520 1251 aa21.41■■□□□ 1.02
CDH5-204ENST00000563425 TACC1O75410 805 aa21.41■■□□□ 1.02
CDH5-204ENST00000563425 RPS6P62753 249 aaKnown RBP21.41■■□□□ 1.02
CDH5-204ENST00000563425 BRD3Q15059 726 aa21.41■■□□□ 1.02
CDH5-204ENST00000563425 TAAR1Q96RJ0 339 aa21.41■■□□□ 1.02
CDH5-204ENST00000563425 SEC31AO94979 1220 aaKnown RBP21.4■■□□□ 1.02
CDH5-204ENST00000563425 SLC9A1P19634 815 aa21.4■■□□□ 1.02
CDH5-204ENST00000563425 PON1P27169 355 aa21.4■■□□□ 1.02
CDH5-204ENST00000563425 SPP2Q13103 211 aa21.4■■□□□ 1.02
CDH5-204ENST00000563425 MAPK7Q13164 816 aa21.4■■□□□ 1.02
CDH5-204ENST00000563425 RAPGEF1Q13905 1077 aa21.4■■□□□ 1.02
CDH5-204ENST00000563425 EXOC3L4Q17RC7 722 aa21.4■■□□□ 1.02
CDH5-204ENST00000563425 DCAF17Q5H9S7 520 aaPredicted RBP21.4■■□□□ 1.02
CDH5-204ENST00000563425 ODR4Q5SWX8 454 aa21.4■■□□□ 1.02
CDH5-204ENST00000563425 SCYL3Q8IZE3 742 aa21.4■■□□□ 1.02
CDH5-204ENST00000563425 MLXIPQ9HAP2 919 aa21.4■■□□□ 1.02
CDH5-204ENST00000563425 RAB21Q9UL25 225 aa21.4■■□□□ 1.02
CDH5-204ENST00000563425 JRKLQ9Y4A0 524 aa21.4■■□□□ 1.02
CDH5-204ENST00000563425 CTDP1Q9Y5B0 961 aaPredicted RBP21.4■■□□□ 1.02
CDH5-204ENST00000563425 CD2APQ9Y5K6 639 aa21.4■■□□□ 1.02
CDH5-204ENST00000563425 CAPN6Q9Y6Q1 641 aa21.4■■□□□ 1.02
CDH5-204ENST00000563425 ACTN1P12814 892 aa21.39■■□□□ 1.02
CDH5-204ENST00000563425 MTMR1Q13613 665 aa21.39■■□□□ 1.02
CDH5-204ENST00000563425 PGM5Q15124 567 aa21.39■■□□□ 1.02
CDH5-204ENST00000563425 KLHDC7AQ5VTJ3 777 aa21.39■■□□□ 1.02
CDH5-204ENST00000563425 TRERF1Q96PN7 1200 aa21.39■■□□□ 1.02
CDH5-204ENST00000563425 MKNK1Q9BUB5 465 aa21.39■■□□□ 1.02
CDH5-204ENST00000563425 STRA6Q9BX79 667 aa21.39■■□□□ 1.02
CDH5-204ENST00000563425 IKZF4Q9H2S9 585 aa21.39■■□□□ 1.02
CDH5-204ENST00000563425 ARFGAP3Q9NP61 516 aa21.39■■□□□ 1.02
CDH5-204ENST00000563425 GTPBP10A4D1E9 387 aaKnown RBP21.39■■□□□ 1.01
CDH5-204ENST00000563425 VWA5AO00534 786 aa21.39■■□□□ 1.01
CDH5-204ENST00000563425 SRGAP2O75044 1071 aa21.39■■□□□ 1.01
CDH5-204ENST00000563425 HIP1RO75146 1068 aa21.39■■□□□ 1.01
CDH5-204ENST00000563425 EIF2AK2P19525 551 aaKnown RBP21.39■■□□□ 1.01
CDH5-204ENST00000563425 PSMC2P35998 433 aaKnown RBP21.39■■□□□ 1.01
CDH5-204ENST00000563425 BACE1P56817 501 aa21.39■■□□□ 1.01
CDH5-204ENST00000563425 ASIC2Q16515 512 aa21.39■■□□□ 1.01
CDH5-204ENST00000563425 PADI6Q6TGC4 694 aa21.39■■□□□ 1.01
CDH5-204ENST00000563425 SMAP1Q8IYB5 467 aaPredicted RBP21.39■■□□□ 1.01
CDH5-204ENST00000563425 DAW1Q8N136 415 aa21.39■■□□□ 1.01
CDH5-204ENST00000563425 NOA1Q8NC60 698 aaKnown RBP21.39■■□□□ 1.01
CDH5-204ENST00000563425 TBC1D22BQ9NU19 505 aa21.39■■□□□ 1.01
CDH5-204ENST00000563425 DBR1Q9UK59 544 aaKnown RBP21.39■■□□□ 1.01
CDH5-204ENST00000563425 PCDHB13Q9Y5F0 798 aa21.39■■□□□ 1.01
CDH5-204ENST00000563425 PPP1R37O75864 691 aa21.38■■□□□ 1.01
CDH5-204ENST00000563425 LYPLA2O95372 231 aa21.38■■□□□ 1.01
CDH5-204ENST00000563425 MOCS3O95396 460 aa21.38■■□□□ 1.01
CDH5-204ENST00000563425 UCHL3P15374 230 aa21.38■■□□□ 1.01
CDH5-204ENST00000563425 CKAP4Q07065 602 aaKnown RBP21.38■■□□□ 1.01
CDH5-204ENST00000563425 TCERG1LQ5VWI1 586 aa21.38■■□□□ 1.01
CDH5-204ENST00000563425 GBP6Q6ZN66 633 aa21.38■■□□□ 1.01
CDH5-204ENST00000563425 FAM186BQ8IYM0 893 aa21.38■■□□□ 1.01
CDH5-204ENST00000563425 FAM133AQ8N9E0 248 aa21.38■■□□□ 1.01
CDH5-204ENST00000563425 PNKPQ96T60 521 aa21.38■■□□□ 1.01
CDH5-204ENST00000563425 AS3MTQ9HBK9 375 aa21.38■■□□□ 1.01
CDH5-204ENST00000563425 DMAC2Q9NW81 257 aa21.38■■□□□ 1.01
CDH5-204ENST00000563425 FBXL5Q9UKA1 691 aa21.38■■□□□ 1.01
CDH5-204ENST00000563425 ZHX2Q9Y6X8 837 aa21.38■■□□□ 1.01
CDH5-204ENST00000563425 POLR2AP24928 1970 aaKnown RBP21.38■■□□□ 1.01
CDH5-204ENST00000563425 TBC1D8O95759 1140 aa21.37■■□□□ 1.01
CDH5-204ENST00000563425 KLHL30Q0D2K2 578 aa21.37■■□□□ 1.01
CDH5-204ENST00000563425 SLC18A3Q16572 532 aa21.37■■□□□ 1.01
CDH5-204ENST00000563425 RNF207Q6ZRF8 634 aa21.37■■□□□ 1.01
CDH5-204ENST00000563425 HS2ST1Q7LGA3 356 aa21.37■■□□□ 1.01
CDH5-204ENST00000563425 KSR1Q8IVT5 923 aa21.37■■□□□ 1.01
CDH5-204ENST00000563425 RNF10Q8N5U6 811 aaKnown RBP21.37■■□□□ 1.01
CDH5-204ENST00000563425 ZNF280CQ8ND82 737 aa21.37■■□□□ 1.01
CDH5-204ENST00000563425 ATG4CQ96DT6 458 aa21.37■■□□□ 1.01
CDH5-204ENST00000563425 RPGRIP1Q96KN7 1286 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms